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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:gfo03030]
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03410 Base excision repair [PATH:gfo03410]
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 GFO_1784 nth; endonuclease III
GFO_1623 ung; uracil-DNA glycosylase
GFO_3576 mutY; A/G-specific adenine glycosylase
GFO_3213 mutM; formamidopyrimidine-DNA glycosylase
GFO_3040 DNA-3-methyladenine glycosylase
GFO_3536 exoA; exodeoxyribonuclease
GFO_0140 polA; DNA polymerase I
GFO_3359 recJ; single-stranded-DNA-specific exonuclease RecJ
GFO_0640 ligA; DNA ligase
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:gfo03420]
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03430 Mismatch repair [PATH:gfo03430]
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03440 Homologous recombination [PATH:gfo03440]
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03450 Non-homologous end-joining [PATH:gfo03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:gfo03000]
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03021 Transcription machinery [BR:gfo03021]
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03019 Messenger RNA biogenesis [BR:gfo03019]
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03041 Spliceosome
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03011 Ribosome [BR:gfo03011]
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03009 Ribosome biogenesis [BR:gfo03009]
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03016 Transfer RNA biogenesis [BR:gfo03016]
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03012 Translation factors [BR:gfo03012]
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03110 Chaperones and folding catalysts [BR:gfo03110]
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04131 Membrane trafficking [BR:gfo04131]
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04121 Ubiquitin system [BR:gfo04121]
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03051 Proteasome [BR:gfo03051]
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03032 DNA replication proteins [BR:gfo03032]
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03036 Chromosome and associated proteins [BR:gfo03036]
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03400 DNA repair and recombination proteins [BR:gfo03400]
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GFO_3234 methylated-DNA-[protein]-cysteine S-methyltransferase
GFO_1822 phr; deoxyribodipyrimidine photo-lyase
GFO_1623 ung; uracil-DNA glycosylase
GFO_3576 mutY; A/G-specific adenine glycosylase
GFO_1784 nth; endonuclease III
GFO_2348 S1/P1 endonuclease family protein
GFO_1515 NUDIX family hydrolase
GFO_3075 protein containing NUDIX domain
GFO_3262 deoxyuridine 5'-triphosphate nucleotidohydrolase
GFO_2716 deoxyribodipyrimidine photolyase family protein
GFO_3040 DNA-3-methyladenine glycosylase
GFO_3213 mutM; formamidopyrimidine-DNA glycosylase
GFO_3536 exoA; exodeoxyribonuclease
GFO_3359 recJ; single-stranded-DNA-specific exonuclease RecJ
GFO_0640 ligA; DNA ligase
GFO_0140 polA; DNA polymerase I
GFO_2065 uvrA; UvrABC system protein A
GFO_1787 uvrA; UvrABC system protein A
GFO_1943 UvrABC system protein A-like
GFO_2292 uvrB; UvrABC system protein B
GFO_3173 uvrC; UvrABC system protein C
GFO_2323 PcrA-like UvrD/Rep family ATP-dependent DNA helicase
GFO_2370 rpoB; DNA-directed RNA polymerase subunit beta
GFO_2369 rpoC; DNA-directed RNA polymerase subunit beta'
GFO_2814 rpoA; DNA-directed RNA polymerase alpha subunit
GFO_2610 hypothetical protein
GFO_3159 transcription-repair coupling factor
GFO_0254 mutS; DNA mismatch repair protein MutS
GFO_1624 MutS family DNA mismatch repair protein
GFO_0797 mutL; DNA mismatch repair protein MutL
GFO_3028 dnaE; DNA polymerase III subunit alpha-1
GFO_3078 dnaE; DNA polymerase III subunit alpha-2
GFO_1914 dnaN; DNA polymerase III subunit beta
GFO_2314 DNA polymerase III subunit delta
GFO_3295 holB; DNA polymerase III subunit delta'
GFO_2655 protein containing exonuclease domain
GFO_1905 exonuclease family protein
GFO_2248 dnaQ; DNA polymerase III subunit epsilon
GFO_0663 exonuclease family protein
GFO_1830 dnaX; DNA polymerase III subunit gamma/tau
GFO_1227 ssb; single-stranded DNA-binding protein
GFO_1349 ssb; single-stranded DNA-binding protein
GFO_3577 ssb; single-stranded DNA-binding protein
GFO_3102 ssb; single-stranded DNA-binding protein
GFO_3246 recA; RecA protein
GFO_0181 ruvA; Holliday junction ATP-dependent DNA helicase RuvA
GFO_0168 ruvB; Holliday junction ATP-dependent DNA helicase RuvB
GFO_0072 ruvC; crossover junction endodeoxyribonuclease RuvC
GFO_1106 priA; primosomal protein N' (replication factor Y)
GFO_2487 conserved hypothetical protein
GFO_3540 radA; DNA repair protein RadA
GFO_0793 recF; DNA replication and repair protein RecF
GFO_2331 recG; ATP-dependent DNA helicase RecG
GFO_3185 recO; DNA repair protein RecO
GFO_2251 recR; recombination protein RecR
GFO_0652 recN; DNA repair protein RecN
GFO_2760 protein containing DUF853
GFO_0299 protein containing Ku70/Ku80 domain-most likely a DNA repair protein
GFO_0300 ATP-dependent DNA ligase family protein
GFO_1503 gyrA; DNA gyrase subunit A
GFO_2749 gyrB; DNA gyrase subunit B
GFO_3017 topA; DNA topoisomerase I
GFO_1903 eukaryotic DNA topoisomerase I-like protein
GFO_1443 hupB; histone-like bacterial DNA-binding protein
GFO_3575 histone-like bacterial DNA-binding protein
GFO_2485 recT; RecT family protein
GFO_1747 recQ; ATP-dependent DNA helicase RecQ
GFO_0592 recQ; ATP-dependent DNA helicase RecQ
GFO_1445 RecQ-like DEAD box helicase family protein
GFO_3388 dinB2; DNA polymerase IV 2
GFO_3077 dinB; DNA polymerase IV
GFO_3569 recX; regulatory protein RecX
GFO_3528 DEAD box helicase family protein
GFO_3475 nrdA; ribonucleoside-diphosphate reductase large chain
GFO_2142 nrdA; ribonucleotide reductase large subunit
GFO_3476 ribonucleoside-diphosphate reductase small chain
GFO_0788 protein containing phosphoesterase domain
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:gfo03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Christiangramia forsetii