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09100 Metabolism
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09101 Carbohydrate metabolism
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09102 Energy metabolism
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00190 Oxidative phosphorylation [PATH:hsm00190]
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00195 Photosynthesis
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00196 Photosynthesis - antenna proteins
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00710 Carbon fixation in photosynthetic organisms
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00720 Carbon fixation pathways in prokaryotes
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00680 Methane metabolism [PATH:hsm00680]
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00910 Nitrogen metabolism [PATH:hsm00910]
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00920 Sulfur metabolism [PATH:hsm00920]
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HSM_1812 3'(2'),5'-bisphosphate nucleotidase
HSM_1375 molybdopterin oxidoreductase
HSM_1377 4Fe-4S ferredoxin iron-sulfur binding domain protein
HSM_1376 Polysulphide reductase NrfD
HSM_0026 Rhodanese domain protein
HSM_0020 serine O-acetyltransferase
HSM_0639 cysteine synthase A
HSM_1561 homoserine O-acetyltransferase
HSM_0277 Cystathionine gamma-synthase
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K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K08357 ttrA; tetrathionate reductase subunit A
K08358 ttrB; tetrathionate reductase subunit B
K08359 ttrC; tetrathionate reductase subunit C
K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
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09103 Lipid metabolism
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09104 Nucleotide metabolism
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09105 Amino acid metabolism
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09106 Metabolism of other amino acids
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09107 Glycan biosynthesis and metabolism
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09108 Metabolism of cofactors and vitamins
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09109 Metabolism of terpenoids and polyketides
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09110 Biosynthesis of other secondary metabolites
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09111 Xenobiotics biodegradation and metabolism
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09112 Not included in regular maps
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:hsm03000]
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03021 Transcription machinery [BR:hsm03021]
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03019 Messenger RNA biogenesis [BR:hsm03019]
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03041 Spliceosome
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03011 Ribosome [BR:hsm03011]
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03009 Ribosome biogenesis [BR:hsm03009]
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03016 Transfer RNA biogenesis [BR:hsm03016]
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HSM_0369 polynucleotide adenylyltransferase/metal dependent phosphohydrolase
HSM_0754 glutamyl-tRNA synthetase
HSM_0313 prolyl-tRNA synthetase
HSM_0054 isoleucyl-tRNA synthetase
HSM_0467 leucyl-tRNA synthetase
HSM_1596 methionyl-tRNA synthetase
HSM_1373 glutaminyl-tRNA synthetase
HSM_1430 arginyl-tRNA synthetase
HSM_0524 lysyl-tRNA synthetase
HSM_0857 aspartyl-tRNA synthetase
HSM_1060 alanyl-tRNA synthetase
HSM_1223 asparaginyl-tRNA synthetase
HSM_1319 threonyl-tRNA synthetase
HSM_1560 seryl-tRNA synthetase
HSM_0115 cysteinyl-tRNA synthetase
HSM_0803 valyl-tRNA synthetase
HSM_0730 histidyl-tRNA synthetase
HSM_1334 phenylalanyl-tRNA synthetase, alpha subunit
HSM_1336 phenylalanyl-tRNA synthetase, beta subunit
HSM_0310 tyrosyl-tRNA synthetase
HSM_0044 tryptophanyl-tRNA synthetase
HSM_1105 D-tyrosyl-tRNA(Tyr) deacylase
HSM_1043 histidine triad (HIT) protein
HSM_1828 tRNA (guanine-N(7)-)-methyltransferase
HSM_0086 protein of unknown function UPF0066
HSM_0804 tRNA pseudouridine synthase A
HSM_1292 tRNA pseudouridine synthase B
HSM_0502 tRNA pseudouridine synthase D TruD
HSM_0154 cysteine desulfurase IscS
HSM_1898 SUA5/yciO/yrdC domain
HSM_1569 tRNA delta(2)-isopentenylpyrophosphate transferase
HSM_2017 tRNA modification GTPase TrmE
HSM_1858 glucose inhibited division protein A
HSM_1812 3'(2'),5'-bisphosphate nucleotidase
HSM_2020 ribonuclease P protein component
HSM_1770 ribonuclease T
HSM_0326 ribonuclease PH
HSM_1001 exoribonuclease II
HSM_1203 ribonuclease D
HSM_0642 ABC transporter related
HSM_0846 glycyl-tRNA synthetase, alpha subunit
HSM_1792 glycyl-tRNA synthetase, beta subunit
HSM_0392 CMP/dCMP deaminase zinc-binding
HSM_1941 TIM-barrel protein, yjbN family
HSM_1609 putative TIM-barrel protein, nifR3 family
HSM_0328 dihydrouridine synthase DuS
HSM_1572 tRNA-i(6)A37 thiotransferase enzyme MiaB
HSM_0858 putative methyltransferase
HSM_0145 putative methyltransferase
HSM_0178 tRNA (uracil-5-)-methyltransferase
HSM_0167 tRNA (guanine-N1)-methyltransferase
HSM_0171 tRNA/rRNA methyltransferase (SpoU)
HSM_0152 RNA methyltransferase, TrmH family, group 1
HSM_0380 RNA methyltransferase, TrmH family, group 2
HSM_0322 methyltransferase small
HSM_1329 pseudouridine synthase
HSM_0459 pseudouridine synthase
HSM_1837 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
HSM_1338 PP-loop domain protein
HSM_0440 SirA family protein
HSM_1795 conserved hypothetical protein
HSM_1796 DsrE family protein
HSM_1797 DsrE family protein
HSM_0200 DsrC family protein
HSM_0156 iron-sulfur cluster assembly protein IscA
HSM_0324 glycine cleavage T protein (aminomethyl transferase)
HSM_1004 protein of unknown function DUF752
HSM_0301 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
HSM_1326 GTP cyclohydrolase I
HSM_0116 protein of unknown function DUF208
HSM_0302 queuine tRNA-ribosyltransferase
HSM_1380 thiamine biosynthesis/tRNA modification protein ThiI
HSM_1412 tRNA(Ile)-lysidine synthetase
HSM_0616 protein of unknown function DUF699 ATPase putative
HSM_1201 peptidase M22 glycoprotease
HSM_0736 putative metalloendopeptidase, glycoprotease family
HSM_1566 protein of unknown function UPF0079
HSM_0814 UBA/THIF-type NAD/FAD binding protein
HSM_0017 ribonuclease R
HSM_1114 Polyribonucleotide nucleotidyltransferase
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K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K01147 rnb; exoribonuclease II [EC:3.1.13.1]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K07237 tusB; tRNA 2-thiouridine synthesizing protein B
K07236 tusC; tRNA 2-thiouridine synthesizing protein C
K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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03012 Translation factors [BR:hsm03012]
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03110 Chaperones and folding catalysts [BR:hsm03110]
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04131 Membrane trafficking [BR:hsm04131]
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04121 Ubiquitin system [BR:hsm04121]
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03051 Proteasome [BR:hsm03051]
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03032 DNA replication proteins [BR:hsm03032]
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03036 Chromosome and associated proteins [BR:hsm03036]
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03400 DNA repair and recombination proteins [BR:hsm03400]
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03029 Mitochondrial biogenesis [BR:hsm03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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