 Eukaryotes (541)
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Animals (250)
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Vertebrates (146)
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Mammals (66)
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 hsa Homo sapiens (human)
ptr Pan troglodytes (chimpanzee)
pps Pan paniscus (bonobo)
ggo Gorilla gorilla gorilla (western lowland gorilla)
pon Pongo abelii (Sumatran orangutan)
nle Nomascus leucogenys (northern white-cheeked gibbon)
mcc Macaca mulatta (rhesus monkey)
mcf Macaca fascicularis (crab-eating macaque)
csab Chlorocebus sabaeus (green monkey)
rro Rhinopithecus roxellana (golden snub-nosed monkey)
rbb Rhinopithecus bieti (black snub-nosed monkey)
cjc Callithrix jacchus (white-tufted-ear marmoset)
sbq Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
mmu Mus musculus (mouse)
mcal Mus caroli (Ryukyu mouse)
mpah Mus pahari (shrew mouse)
rno Rattus norvegicus (rat)
mun Meriones unguiculatus (Mongolian gerbil)
cge Cricetulus griseus (Chinese hamster)
ngi Nannospalax galili (Upper Galilee mountains blind mole rat)
hgl Heterocephalus glaber (naked mole rat)
ccan Castor canadensis (American beaver)
ocu Oryctolagus cuniculus (rabbit)
tup Tupaia chinensis (Chinese tree shrew)
cfa Canis familiaris (dog)
vvp Vulpes vulpes (red fox)
aml Ailuropoda melanoleuca (giant panda)
umr Ursus maritimus (polar bear)
uah Ursus arctos horribilis
oro Odobenus rosmarus divergens (Pacific walrus)
elk Enhydra lutris kenyoni (northern sea otter)
fca Felis catus (domestic cat)
ptg Panthera tigris altaica (Amur tiger)
ppad Panthera pardus (leopard)
aju Acinonyx jubatus (cheetah)
bta Bos taurus (cow)
bom Bos mutus (wild yak)
biu Bos indicus (zebu cattle)
bbub Bubalus bubalis (water buffalo)
chx Capra hircus (goat)
oas Ovis aries (sheep)
ssc Sus scrofa (pig)
cfr Camelus ferus (Wild Bactrian camel)
cdk Camelus dromedarius (Arabian camel)
bacu Balaenoptera acutorostrata scammoni (minke whale)
lve Lipotes vexillifer (Yangtze River dolphin)
oor Orcinus orca (killer whale)
dle Delphinapterus leucas (beluga whale)
pcad Physeter catodon (sperm whale)
ecb Equus caballus (horse)
epz Equus przewalskii (Przewalski's horse)
eai Equus asinus (ass)
myb Myotis brandtii (Brandt's bat)
myd Myotis davidii
mna Miniopterus natalensis
hai Hipposideros armiger (great roundleaf bat)
dro Desmodus rotundus (common vampire bat)
pale Pteropus alecto (black flying fox)
ray Rousettus aegyptiacus (Egyptian rousette)
mjv Manis javanica (Malayan pangolin)
lav Loxodonta africana (African savanna elephant)
tmu Trichechus manatus latirostris (Florida manatee)
mdo Monodelphis domestica (opossum)
shr Sarcophilus harrisii (Tasmanian devil)
pcw Phascolarctos cinereus (koala)
oaa Ornithorhynchus anatinus (platypus)
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Birds (24)
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gga Gallus gallus (chicken)
mgp Meleagris gallopavo (turkey)
cjo Coturnix japonica (Japanese quail)
nmel Numida meleagris (helmeted guineafowl)
apla Anas platyrhynchos (mallard)
acyg Anser cygnoides domesticus (swan goose)
tgu Taeniopygia guttata (zebra finch)
lsr Lonchura striata domestica (Bengalese finch)
scan Serinus canaria (common canary)
gfr Geospiza fortis (medium ground-finch)
fab Ficedula albicollis (collared flycatcher)
phi Pseudopodoces humilis (Tibetan ground-tit)
pmaj Parus major (Great Tit)
ccae Cyanistes caeruleus (blue tit)
ccw Corvus cornix (hooded crow)
etl Empidonax traillii (willow flycatcher)
fpg Falco peregrinus (peregrine falcon)
fch Falco cherrug (Saker falcon)
clv Columba livia (rock pigeon)
egz Egretta garzetta (little egret)
nni Nipponia nippon (crested ibis)
acun Athene cunicularia (burrowing owl)
padl Pygoscelis adeliae (Adelie penguin)
aam Apteryx mantelli mantelli (brown kiwi)
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Reptiles (12)
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asn Alligator sinensis (Chinese alligator)
amj Alligator mississippiensis (American alligator)
pss Pelodiscus sinensis (Chinese soft-shelled turtle)
cmy Chelonia mydas (green sea turtle)
cpic Chrysemys picta (western painted turtle)
acs Anolis carolinensis (green anole)
pvt Pogona vitticeps (central bearded dragon)
pbi Python bivittatus (Burmese python)
pmur Protobothrops mucrosquamatus (Taiwan habu)
tsr Thamnophis sirtalis
pmua Podarcis muralis (common wall lizard)
gja Gekko japonicus
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Amphibians (3)
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xla Xenopus laevis (African clawed frog)
xtr Xenopus tropicalis (western clawed frog)
npr Nanorana parkeri
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Fishes (39)
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dre Danio rerio (zebrafish)
srx Sinocyclocheilus rhinocerous
sanh Sinocyclocheilus anshuiensis
sgh Sinocyclocheilus grahami
ccar Cyprinus carpio (common carp)
ipu Ictalurus punctatus (channel catfish)
phyp Pangasianodon hypophthalmus (striped catfish)
amex Astyanax mexicanus (Mexican tetra)
eee Electrophorus electricus (electric eel)
tru Takifugu rubripes (torafugu)
tng Tetraodon nigroviridis (spotted green pufferfish)
lco Larimichthys crocea (large yellow croaker)
ncc Notothenia coriiceps (black rockcod)
mze Maylandia zebra (zebra mbuna)
onl Oreochromis niloticus (Nile tilapia)
ola Oryzias latipes (Japanese medaka)
xma Xiphophorus maculatus (southern platyfish)
xco Xiphophorus couchianus (Monterrey platyfish)
pret Poecilia reticulata (guppy)
cvg Cyprinodon variegatus (sheepshead minnow)
nfu Nothobranchius furzeri (turquoise killifish)
kmr Kryptolebias marmoratus (mangrove rivulus)
alim Austrofundulus limnaeus (annual killifish)
aoce Amphiprion ocellaris (clown anemonefish)
csem Cynoglossus semilaevis (tongue sole)
pov Paralichthys olivaceus (Japanese flounder)
lcf Lates calcarifer (barramundi perch)
sdu Seriola dumerili (greater amberjack)
slal Seriola lalandi dorsalis (Yellowtail amberjack)
hcq Hippocampus comes (tiger tail seahorse)
bpec Boleophthalmus pectinirostris (great blue-spotted mudskipper)
malb Monopterus albus (swamp eel)
sasa Salmo salar (Atlantic salmon)
otw Oncorhynchus tshawytscha (Chinook salmon)
salp Salvelinus alpinus (Arctic char)
els Esox lucius (northern pike)
sfm Scleropages formosus (Asian bonytongue)
pki Paramormyrops kingsleyae
lcm Latimeria chalumnae (coelacanth)
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Cartilaginous fishes (2)
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cmk Callorhinchus milii (elephant shark)
rtp Rhincodon typus (whale shark)
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Lancelets (1)
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bfo Branchiostoma floridae (Florida lancelet)
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Ascidians (1)
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cin Ciona intestinalis (sea squirt)
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Echinoderms (2)
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spu Strongylocentrotus purpuratus (purple sea urchin)
aplc Acanthaster planci (crown-of-thorns starfish)
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Hemichordates (1)
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sko Saccoglossus kowalevskii (acorn worm)
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Arthropods (72)
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Insects (65)
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dme Drosophila melanogaster (fruit fly)
der Drosophila erecta
dse Drosophila sechellia
dsi Drosophila simulans
dya Drosophila yakuba
dan Drosophila ananassae
dsr Drosophila serrata
dpo Drosophila pseudoobscura pseudoobscura
dpe Drosophila persimilis
dmn Drosophila miranda
dwi Drosophila willistoni
dgr Drosophila grimshawi
dmo Drosophila mojavensis
daz Drosophila arizonae
dnv Drosophila navojoa
dhe Drosophila hydei
dvi Drosophila virilis
mde Musca domestica (house fly)
lcq Lucilia cuprina (Australian sheep blowfly)
aga Anopheles gambiae (mosquito)
aag Aedes aegypti (yellow fever mosquito)
aalb Aedes albopictus (Asian tiger mosquito)
cqu Culex quinquefasciatus (southern house mosquito)
ame Apis mellifera (honey bee)
bim Bombus impatiens (common eastern bumble bee)
bter Bombus terrestris (buff-tailed bumblebee)
ccal Ceratina calcarata (carpenter bee)
obb Osmia bicornis bicornis
soc Solenopsis invicta (red fire ant)
mpha Monomorium pharaonis (pharaoh ant)
aec Acromyrmex echinatior (Panamanian leafcutter ant)
acep Atta cephalotes (leaf cutting ant)
pbar Pogonomyrmex barbatus (red harvester ant)
vem Vollenhovia emeryi
hst Harpegnathos saltator (Jerdon's jumping ant)
dqu Dinoponera quadriceps
cfo Camponotus floridanus (Florida carpenter ant)
lhu Linepithema humile (Argentine ant)
pgc Pseudomyrmex gracilis
obo Ooceraea biroi (clonal raider ant)
pcf Polistes canadensis
nvi Nasonia vitripennis (jewel wasp)
csol Ceratosolen solmsi marchali
mdl Microplitis demolitor
tca Tribolium castaneum (red flour beetle)
dpa Dendroctonus ponderosae (mountain pine beetle)
atd Aethina tumida (small hive beetle)
nvl Nicrophorus vespilloides
bmor Bombyx mori (domestic silkworm)
bman Bombyx mandarina (wild silkworm)
dpl Danaus plexippus (monarch butterfly)
pmac Papilio machaon (common yellow swallowtail)
prap Pieris rapae (cabbage white)
haw Helicoverpa armigera (cotton bollworm)
tnl Trichoplusia ni (cabbage looper)
pxy Plutella xylostella (diamondback moth)
api Acyrthosiphon pisum (pea aphid)
dnx Diuraphis noxia (Russian wheat aphid)
ags Aphis gossypii (cotton aphid)
rmd Rhopalosiphum maidis (corn leaf aphid)
btab Bemisia tabaci (sweet potato whitefly)
clec Cimex lectularius (bed bug)
phu Pediculus humanus corporis (human body louse)
zne Zootermopsis nevadensis
fcd Folsomia candida
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Crustaceans (2)
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dpx Daphnia pulex (common water flea)
pvm Penaeus vannamei (Pacific white shrimp)
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Chelicerates (5)
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isc Ixodes scapularis (black-legged tick)
tut Tetranychus urticae (two-spotted spider mite)
dpte Dermatophagoides pteronyssinus (European house dust mite)
cscu Centruroides sculpturatus (bark scorpion)
ptep Parasteatoda tepidariorum (common house spider)
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Nematodes (6)
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cel Caenorhabditis elegans (nematode)
cbr Caenorhabditis briggsae
bmy Brugia malayi (filaria)
loa Loa loa (eye worm)
nai Necator americanus
tsp Trichinella spiralis
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Annelids (1)
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hro Helobdella robusta
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Mollusks (5)
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lgi Lottia gigantea (owl limpet)
pcan Pomacea canaliculata (golden apple snail)
crg Crassostrea gigas (Pacific oyster)
myi Mizuhopecten yessoensis (Yesso scallop)
obi Octopus bimaculoides
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Brachiopodas (1)
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lak Lingula anatina
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Flatworms (4)
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smm Schistosoma mansoni
shx Schistosoma haematobium
ovi Opisthorchis viverrini
egl Echinococcus granulosus
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Cnidarians (8)
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nve Nematostella vectensis (starlet sea anemone)
epa Exaiptasia diaphana
adf Acropora digitifera (stony coral)
amil Acropora millepora
pdam Pocillopora damicornis (lace coral)
spis Stylophora pistillata
dgt Dendronephthya gigantea (soft corals)
hmg Hydra vulgaris
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Placozoans (1)
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tad Trichoplax adhaerens
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Poriferans (1)
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aqu Amphimedon queenslandica (sponge)
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Plants (106)
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Eudicots (75)
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Mustard family (9)
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ath Arabidopsis thaliana (thale cress)
aly Arabidopsis lyrata (lyrate rockcress)
crb Capsella rubella
csat Camelina sativa (false flax)
eus Eutrema salsugineum
brp Brassica rapa (field mustard)
bna Brassica napus (rape)
boe Brassica oleracea (wild cabbage)
rsz Raphanus sativus (radish)
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Caper family (1)
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thj Tarenaya hassleriana (spider flower)
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Papaya family (1)
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cpap Carica papaya (papaya)
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Rue family (2)
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cit Citrus sinensis (Valencia orange)
cic Citrus clementina (mandarin orange)
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Mallow family (5)
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tcc Theobroma cacao (cacao)
gra Gossypium raimondii
ghi Gossypium hirsutum (upland cotton)
gab Gossypium arboreum
dzi Durio zibethinus (durian)
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Myrtle family (1)
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egr Eucalyptus grandis (rose gum)
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Pea family (13)
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gmx Glycine max (soybean)
gsj Glycine soja (wild soybean)
pvu Phaseolus vulgaris (common bean)
vra Vigna radiata (mung bean)
var Vigna angularis (adzuki bean)
vun Vigna unguiculata (cowpea)
ccaj Cajanus cajan (pigeon pea)
mtr Medicago truncatula (barrel medic)
cam Cicer arietinum (chickpea)
lja Lotus japonicus
adu Arachis duranensis
aip Arachis ipaensis
lang Lupinus angustifolius (narrow-leaved blue lupine)
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Rose family (7)
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fve Fragaria vesca (woodland strawberry)
rcn Rosa chinensis (China rose)
pper Prunus persica (peach)
pmum Prunus mume (Japanese apricot)
pavi Prunus avium (sweet cherry)
mdm Malus domestica (apple)
pxb Pyrus x bretschneideri (Chinese white pear)
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Buckthorn family (1)
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zju Ziziphus jujuba (Chinese jujube)
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Cucumber family (6)
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csv Cucumis sativus (cucumber)
cmo Cucumis melo (muskmelon)
mcha Momordica charantia (bitter melon)
cmax Cucurbita maxima (winter squash)
cmos Cucurbita moschata (crookneck pumpkin)
cpep Cucurbita pepo subsp. pepo (vegetable marrow)
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Spurge family (4)
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rcu Ricinus communis (castor bean)
jcu Jatropha curcas
hbr Hevea brasiliensis (rubber tree)
mesc Manihot esculenta (cassava)
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Willow family (2)
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pop Populus trichocarpa (black cottonwood)
peu Populus euphratica (Euphrates poplar)
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Walnut family (1)
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jre Juglans regia (English walnut)
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Beech family (1)
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qsu Quercus suber (cork oak)
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Grape family (1)
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vvi Vitis vinifera (wine grape)
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Nightshade family (8)
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sly Solanum lycopersicum (tomato)
spen Solanum pennellii
sot Solanum tuberosum (potato)
cann Capsicum annuum
nta Nicotiana tabacum (common tobacco)
nsy Nicotiana sylvestris
nto Nicotiana tomentosiformis
nau Nicotiana attenuata
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Morning-glory family (1)
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ini Ipomoea nil (Japanese morning glory)
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Sesame family (1)
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sind Sesamum indicum (sesame)
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Olive family (1)
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oeu Olea europaea var. sylvestris (wild olive)
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Daisy family (3)
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han Helianthus annuus (common sunflower)
lsv Lactuca sativa (garden lettuce)
ccav Cynara cardunculus var. scolymus (artichoke)
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Parsley family (1)
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dcr Daucus carota (carrot)
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Amaranth family (3)
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bvg Beta vulgaris (sugar beet)
soe Spinacia oleracea (spinach)
cqi Chenopodium quinoa (quinoa)
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Lotus family (1)
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nnu Nelumbo nucifera (sacred lotus)
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Poppy family (1)
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psom Papaver somniferum (opium poppy)
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Monocots (14)
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Grass family (8)
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osa Oryza sativa japonica (Japanese rice) (RefSeq)
dosa Oryza sativa japonica (Japanese rice) (RAPDB)
obr Oryza brachyantha (malo sina)
bdi Brachypodium distachyon
ats Aegilops tauschii (wheat D)
sbi Sorghum bicolor (sorghum)
zma Zea mays (maize)
sita Setaria italica (foxtail millet)
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Palm family (2)
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pda Phoenix dactylifera (date palm)
egu Elaeis guineensis (African oil palm)
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Banana family (1)
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mus Musa acuminata (wild Malaysian banana)
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Orchid family (2)
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dct Dendrobium catenatum
peq Phalaenopsis equestris
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Asparagus family (1)
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aof Asparagus officinalis (garden asparagus)
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Basal Magnoliophyta (1)
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Amborella family (1)
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atr Amborella trichopoda
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Ferns (1)
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smo Selaginella moellendorffii
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Mosses (1)
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ppp Physcomitrium patens
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Green algae (11)
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cre Chlamydomonas reinhardtii
vcn Volvox carteri f. nagariensis
mng Monoraphidium neglectum
csl Coccomyxa subellipsoidea
cvr Chlorella variabilis
apro Auxenochlorella protothecoides
olu Ostreococcus lucimarinus
ota Ostreococcus tauri
bpg Bathycoccus prasinos
mis Micromonas commoda
mpp Micromonas pusilla
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Red algae (3)
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cme Cyanidioschyzon merolae
gsl Galdieria sulphuraria
ccp Chondrus crispus (carragheen)
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Fungi (133)
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Ascomycetes (95)
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Saccharomycetes (32)
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sce Saccharomyces cerevisiae (budding yeast)
ago Ashbya gossypii (Eremothecium gossypii)
erc Eremothecium cymbalariae
kla Kluyveromyces lactis
kmx Kluyveromyces marxianus
lth Lachancea thermotolerans
vpo Vanderwaltozyma polyspora
zro Zygosaccharomyces rouxii
cgr Candida glabrata
ncs Naumovozyma castellii
ndi Naumovozyma dairenensis
tpf Tetrapisispora phaffii
tbl Tetrapisispora blattae
tdl Torulaspora delbrueckii
kaf Kazachstania africana
ppa Komagataella phaffii
dha Debaryomyces hansenii
pic Scheffersomyces stipitis
pgu Meyerozyma guilliermondii
spaa Spathaspora passalidarum
lel Lodderomyces elongisporus
cal Candida albicans
ctp Candida tropicalis
cot Candida orthopsilosis
cdu Candida dubliniensis
cten Yamadazyma tenuis
yli Yarrowia lipolytica
clu Clavispora lusitaniae ATCC 42720
clus Clavispora lusitaniae CBS 6936
caur Candida auris
slb Sugiyamaella lignohabitans
pkz Pichia kudriavzevii
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Sordariomycetes (27)
|
ncr Neurospora crassa
nte Neurospora tetrasperma
smp Sordaria macrospora
pan Podospora anserina
ttt Thermothielavioides terrestris
mtm Thermothelomyces thermophilus
cthr Chaetomium thermophilum
mgr Pyricularia oryzae
tmn Phaeoacremonium minimum
ssck Sporothrix schenckii
fgr Fusarium graminearum
fpu Fusarium pseudograminearum
fvr Fusarium verticillioides
fox Fusarium oxysporum
nhe Nectria haematococca
tre Trichoderma reesei QM6a
trr Trichoderma reesei RUT C-30
maw Metarhizium acridum
maj Metarhizium robertsii
cmt Cordyceps militaris
plj Purpureocillium lilacinum
val Verticillium alfalfae
vda Verticillium dahliae
cfj Colletotrichum fioriniae
sapo Scedosporium apiospermum
ela Eutypa lata
pfy Pestalotiopsis fici
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Leotiomycetes (5)
|
ssl Sclerotinia sclerotiorum
bfu Botrytis cinerea
mbe Marssonina brunnea
psco Phialocephala scopiformis
glz Glarea lozoyensis
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Eurotiomycetes (19)
|
ani Aspergillus nidulans
afm Aspergillus fumigatus
act Aspergillus clavatus
nfi Aspergillus fischeri
aor Aspergillus oryzae
ang Aspergillus niger
afv Aspergillus flavus
pcs Penicillium rubens
pdp Penicillium digitatum
tmf Talaromyces marneffei
cim Coccidioides immitis
cpw Coccidioides posadasii
pbl Paracoccidioides lutzii Pb01
pbn Paracoccidioides brasiliensis
ure Uncinocarpus reesii
abe Trichophyton benhamiae
tve Trichophyton verrucosum
aje Histoplasma capsulatum
bgh Blastomyces gilchristii
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Dothideomycetes (10)
|
pno Parastagonospora nodorum
pte Pyrenophora teres
bze Bipolaris zeicola
bsc Bipolaris sorokiniana
bor Bipolaris oryzae
aalt Alternaria alternata
ztr Zymoseptoria tritici
pfj Pseudocercospora fijiensis
bcom Baudoinia panamericana
npa Neofusicoccum parvum
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Pezizomycetes (1)
|
tml Tuber melanosporum
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29/59
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Schizosaccharomycetes (1)
|
spo Schizosaccharomyces pombe (fission yeast)
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26/59
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Basidiomycetes (33)
|
cne Cryptococcus neoformans var. neoformans JEC21
cnb Cryptococcus neoformans var. neoformans B-3501A
cgi Cryptococcus gattii
tms Tremella mesenterica
tasa Trichosporon asahii var. asahii
ppl Postia placenta
tvs Trametes versicolor
dsq Dichomitus squalens
pco Phanerochaete carnosa
shs Stereum hirsutum
hir Heterobasidion irregulare
psq Punctularia strigosozonata
adl Auricularia subglabra
fme Fomitiporia mediterranea
gtr Gloeophyllum trabeum
lbc Laccaria bicolor
mpr Moniliophthora perniciosa
mrr Moniliophthora roreri
cci Coprinopsis cinerea
scm Schizophyllum commune
abp Agaricus bisporus var. burnettii JB137-S8
abv Agaricus bisporus var. bisporus H97
cput Coniophora puteana
sla Serpula lacrymans
wse Wallemia mellicola
wic Wallemia ichthyophaga
uma Ustilago maydis
pfp Anthracocystis flocculosa
mgl Malassezia globosa
mrt Malassezia restricta
msym Malassezia sympodialis
pgr Puccinia graminis
mlr Melampsora larici-populina
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Microsporidians (5)
|
|
|
Protists (52)
|
Choanoflagellates (2)
|
mbr Monosiga brevicollis
sre Salpingoeca rosetta
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Amoebozoa (7)
|
Dictyostelia (3)
|
ddi Dictyostelium discoideum (cellular slime mold)
dpp Dictyostelium purpureum (cellular slime mold)
dfa Cavenderia fasciculata (cellular slime mold)
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25/59
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Entamoeba (3)
|
Acanthamoeba (1)
|
acan Acanthamoeba castellanii
|
27/59
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Alveolates (21)
|
Apicomplexans (18)
|
Ciliates (2)
|
tet Tetrahymena thermophila
ptm Paramecium tetraurelia
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Dinoflagellates (1)
|
smin Breviolum minutum
|
13/59
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Stramenopiles (8)
|
Diatoms (3)
|
pti Phaeodactylum tricornutum
fcy Fragilariopsis cylindrus
tps Thalassiosira pseudonana
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Eustigmatophytes (1)
|
ngd Nannochloropsis gaditana
|
3/59
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Pelagophytes (1)
|
aaf Aureococcus anophagefferens
|
14/59
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Oomycetes (3)
|
pif Phytophthora infestans
psoj Phytophthora sojae
spar Saprolegnia parasitica
|
9/59
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Haptophyta (1)
|
ehx Emiliania huxleyi
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Cryptomonads (1)
|
gtt Guillardia theta
|
18/59
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Euglenozoa (9)
|
Kinetoplasts (9)
|
tbr Trypanosoma brucei brucei
tbg Trypanosoma brucei gambiense
tcr Trypanosoma cruzi
lma Leishmania major
lif Leishmania infantum
ldo Leishmania donovani
lmi Leishmania mexicana
lbz Leishmania braziliensis
lpan Leishmania panamensis
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Heterolobosea (1)
|
Tetramitia (1)
|
ngr Naegleria gruberi
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Metamonada (2)
|
Trichomonads (1)
Diplomonads (1)
|
|
|
|
Prokaryotes (6109)
|
|
|
Bacteria (5783)
|
Gammaproteobacteria - Enterobacteria (511)
|
Escherichia (69)
|
Salmonella (54)
|
Shigella (13)
|
Enterobacter (31)
|
Cronobacter (11)
|
Klebsiella (42)
|
Citrobacter (15)
|
Gibbsiella (1)
|
Blochmannia (6)
|
Hamiltonella (1)
|
unclassified aphid symbionts (2)
|
unclassified mealybug symbionts (1)
|
Riesia (2)
|
Moranella (2)
|
Shimwellia (1)
|
Raoultella (6)
|
Cedecea (4)
|
Pluralibacter (3)
|
Kosakonia (5)
|
Kluyvera (2)
|
Ishikawaella (1)
|
Leclercia (6)
|
Lelliottia (4)
|
Limnobaculum (1)
|
Buttiauxella (2)
|
Tachikawaea (1)
|
Doolittlea (1)
|
Hoaglandella (1)
|
Gullanella (1)
|
Mikella (1)
|
Purcelliella (1)
|
Metakosakonia (1)
|
Atlantibacter (1)
|
Izhakiella (1)
|
Yokenella (1)
|
Scandinavium (1)
|
unclassified Enterobacteriaceae (4)
|
Yersinia (46)
|
Serratia (24)
|
sof Serratia odorifera
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2/59
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Chania (1)
|
Rahnella (4)
|
Fukatsuia (1)
|
Pectobacterium (13)
|
Sodalis (4)
|
Dickeya (11)
|
Brenneria (3)
|
Lonsdalea (1)
|
Erwinia (11)
|
Buchnera (18)
|
Wigglesworthia (2)
|
Pantoea (17)
|
Mixta (4)
|
Tatumella (2)
|
Photorhabdus (4)
|
Proteus (8)
|
Xenorhabdus (7)
|
Providencia (9)
|
Morganella (1)
|
Arsenophonus (3)
|
Edwardsiella (8)
|
Hafnia (2)
|
Obesumbacterium (1)
|
Pragia (2)
|
Leminorella (1)
|
Phytobacter (2)
|
Plesiomonas (1)
|
Gammaproteobacteria - Others (842)
|
Haemophilus (22)
|
Glaesserella (5)
|
Histophilus (2)
|
Pasteurella (7)
|
Basfia (2)
|
Mannheimia (15)
|
Actinobacillus (11)
|
Aggregatibacter (9)
|
Gallibacterium (1)
|
Bibersteinia (4)
|
Avibacterium (2)
|
Rodentibacter (2)
|
Otariodibacter (1)
|
Frederiksenia (1)
|
Bisgaardia (1)
|
unclassified Pasteurellaceae (1)
|
Xylella (9)
|
Xanthomonas (38)
|
Stenotrophomonas (11)
|
Pseudoxanthomonas (3)
|
Lysobacter (11)
|
lab Lysobacter antibioticus 76
laq Lysobacter antibioticus ATCC 29479
lmb Lysobacter maris
lyj Lysobacter sp. SJ-36
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Luteimonas (3)
|
Thermomonas (2)
|
Pseudolysobacter (1)
|
Frateuria (1)
|
fau Frateuria aurantia
|
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Rhodanobacter (2)
|
Dyella (4)
|
dja Dyella japonica
dye Dyella sp. M7H15-1
|
2/59
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Dokdonella (1)
|
Luteibacter (2)
|
Ahniella (1)
|
Aerosticca (1)
|
Vibrio (53)
|
Aliivibrio (4)
|
Photobacterium (3)
|
Grimontia (1)
|
Paraphotobacterium (1)
|
Salinivibrio (3)
|
Pseudomonas (115)
|
Azotobacter (4)
|
avn Azotobacter vinelandii DJ
avl Azotobacter vinelandii CA
avd Azotobacter vinelandii CA6
|
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Oblitimonas (1)
|
Permianibacter (1)
|
Psychrobacter (12)
|
psyc Psychrobacter sp. DAB_AL43B
|
2/59
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Acinetobacter (47)
|
Moraxella (8)
|
unclassified Moraxellaceae (1)
|
Shewanella (34)
|
Idiomarina (5)
|
Colwellia (7)
|
Litorilituus (1)
|
Thalassotalea (2)
|
Pseudoalteromonas (23)
|
Marinobacter (12)
|
Alteromonas (23)
|
Glaciecola (2)
|
Paraglaciecola (2)
|
Lacimicrobium (1)
|
Catenovulum (1)
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Saliniradius (1)
|
Salinimonas (2)
|
Hydrocarboniclastica (1)
|
Psychromonas (2)
|
Ferrimonas (2)
|
Moritella (3)
|
Cellvibrio (5)
|
ceb Cellvibrio sp. PSBB023
|
4/59
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Saccharophagus (1)
|
sde Saccharophagus degradans
|
4/59
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Teredinibacter (1)
|
ttu Teredinibacter turnerae
|
2/59
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Simiduia (1)
|
saga Simiduia agarivorans
|
4/59
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Spongiibacter (1)
|
Zhongshania (1)
|
zal Zhongshania aliphaticivorans
|
5/59
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Oceanicoccus (1)
|
Microbulbifer (6)
|
mthd Microbulbifer thermotolerans
micc Microbulbifer aggregans
mict Microbulbifer sp. THAF38
|
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Halioglobus (2)
|
Kineobactrum (1)
|
Coxiella (8)
|
cbu Coxiella burnetii RSA 493
cbs Coxiella burnetii RSA 331
cbd Coxiella burnetii Dugway 5J108-111
cbc Coxiella burnetii CbuK_Q154
|
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Rickettsiella (1)
|
Aquicella (2)
|
Legionella (23)
|
llo Legionella longbeachae
lfa Legionella fallonii
lha Legionella hackeliae
lcd Legionella clemsonensis
lsh Legionella sainthelensi
llg Legionella lansingensis
ljr Legionella jordanis
lcj Legionella cherrii
|
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Tatlockia (1)
|
tmc Tatlockia micdadei
|
5/59
|
Methylococcus (2)
|
mca Methylococcus capsulatus
metu Methylococcus sp. IM1
|
15/59
15/59
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Methylomonas (5)
|
mmt Methylomonas methanica
mdn Methylomonas denitrificans
mdh Methylomonas sp. DH-1
mko Methylomonas koyamae
metl Methylomonas sp. LW13
|
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|
Methylomicrobium (2)
|
mah Methylomicrobium alcaliphilum
mbur Methylomicrobium buryatense
|
17/59
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Methylovulum (1)
|
mpsy Methylovulum psychrotolerans
|
2/59
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Methylocaldum (1)
|
mmai Methylocaldum marinum
|
15/59
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Methylospira (1)
|
mmob Candidatus Methylospira mobilis
|
15/59
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Francisella (43)
|
Allofrancisella (2)
|
Hydrogenovibrio (3)
|
Thiomicrospira (3)
|
Methylophaga (2)
|
Cycloclasticus (3)
|
Piscirickettsia (1)
|
Thiomicrorhabdus (1)
|
Thioploca (1)
|
tig Thioploca ingrica
|
2/59
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Beggiatoa (1)
|
blep Beggiatoa leptomitiformis
|
2/59
|
Nitrosococcus (4)
|
noc Nitrosococcus oceani
nhl Nitrosococcus halophilus
nwa Nitrosococcus watsonii
nwr Nitrosococcus wardiae
|
2/59
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Allochromatium (1)
|
Thiocystis (1)
|
Thioflavicoccus (1)
|
Marichromatium (1)
|
Tenderia (1)
|
tee Candidatus Tenderia electrophaga
|
2/59
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Nitrosoglobus (1)
|
ntt Candidatus Nitrosoglobus terrae
|
2/59
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Thiodictyon (1)
|
Rheinheimera (1)
|
Thermochromatium (1)
|
Alkalilimnicola (1)
|
aeh Alkalilimnicola ehrlichii
|
2/59
|
Halorhodospira (2)
|
hha Halorhodospira halophila
hhk Halorhodospira halochloris
|
2/59
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|
Ectothiorhodospira (2)
|
Thioalkalivibrio (5)
|
Spiribacter (4)
|
Acidihalobacter (1)
|
Halothiobacillus (2)
|
Wenzhouxiangella (1)
|
Woeseia (1)
|
Granulosicoccus (1)
|
gai Granulosicoccus antarcticus
|
4/59
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Guyparkeria (1)
|
Thiohalobacter (1)
|
Hahella (2)
|
hch Hahella chejuensis
|
5/59
|
Chromohalobacter (1)
|
Halomonas (18)
|
hco Halomonas chromatireducens
halo Halomonas sp. 1513
|
2/59
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Portiera (9)
|
Carsonella (7)
|
Evansia (1)
|
Zymobacter (1)
|
Halotalea (1)
|
Cobetia (1)
|
Kushneria (3)
|
Pistricoccus (1)
|
Alcanivorax (5)
|
Ketobacter (1)
|
kak Ketobacter alkanivorans
|
5/59
|
Kangiella (4)
|
Marinomonas (3)
|
Thalassolituus (2)
|
Oleispira (1)
|
Marinobacterium (1)
|
mars Marinobacterium aestuarii
|
2/59
|
Bacterioplanes (1)
|
Neptunomonas (1)
|
Nitrincola (1)
|
Bermanella (1)
|
Gynuella (1)
|
Reinekea (1)
|
Oleiphilus (1)
|
Litoricola (1)
|
Aeromonas (22)
|
Tolumonas (1)
|
tau Tolumonas auensis
|
2/59
|
Oceanimonas (1)
|
Oceanisphaera (2)
|
Zobellella (1)
|
Dichelobacter (1)
|
Cardiobacterium (1)
|
Gilliamella (1)
|
Frischella (1)
|
Orbus (1)
|
Steroidobacter (1)
|
Solimonas (1)
|
sok Solimonas sp. K1W22B-7
|
4/59
|
Sinimarinibacterium (1)
|
sini Sinimarinibacterium sp. NLF-5-8
|
5/59
|
Immundisolibacter (1)
|
Sulfuricaulis (1)
|
Sulfurifustis (1)
|
Acidiferrobacter (1)
|
acii Acidiferrobacter sp. SPIII_3
|
2/59
|
Salinisphaera (1)
|
Thiolapillus (1)
|
Sedimenticola (1)
|
Thioglobus (3)
|
Pseudohongiella (1)
|
Nardonella (1)
|
Reidiella (1)
|
Ruthia (1)
|
Vesicomyosocius (1)
|
unclassified Gammaproteobacteria (6)
|
gpb Gamma proteobacterium HdN1
|
5/59
|
Betaproteobacteria (446)
|
Neisseria (30)
|
Snodgrassella (1)
|
Kingella (1)
|
Vitreoscilla (2)
|
Eikenella (2)
|
Simonsiella (1)
|
unclassified Neisseriaceae (1)
|
Chromobacterium (7)
|
Iodobacter (1)
|
Laribacter (1)
|
Pseudogulbenkiania (1)
|
Jeongeupia (1)
|
Aquaspirillum (1)
|
Aquitalea (2)
|
Deefgea (1)
|
Ralstonia (13)
|
rpj Ralstonia pickettii DTP0602
|
2/59
|
Cupriavidus (13)
|
cnc Cupriavidus necator N-1
cuh Cupriavidus necator NH9
reu Cupriavidus pinatubonensis JMP134
rme Cupriavidus metallidurans
cti Cupriavidus taiwanensis
cbw Cupriavidus basilensis
ccup Cupriavidus sp. USMAHM13
cup Cupriavidus malaysiensis
cuu Cupriavidus sp. USMAA2-4
cpau Cupriavidus pauculus
cox Cupriavidus oxalaticus
|
2/59
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|
Burkholderia (89)
|
bma Burkholderia mallei ATCC 23344
bmv Burkholderia mallei SAVP1
bml Burkholderia mallei NCTC 10229
bmn Burkholderia mallei NCTC 10247
bmal Burkholderia mallei 23344
bmae Burkholderia mallei 6
bmaq Burkholderia mallei BMQ
bmai Burkholderia mallei 2000031063
bmaf Burkholderia mallei FMH 23344
bmaz Burkholderia mallei NCTC 10247
bmab Burkholderia mallei 2002734299
bps Burkholderia pseudomallei K96243
bpm Burkholderia pseudomallei 1710b
bpl Burkholderia pseudomallei 1106a
bpd Burkholderia pseudomallei 668
bpse Burkholderia pseudomallei MSHR305
bpsm Burkholderia pseudomallei MSHR511
bpsu Burkholderia pseudomallei MSHR146
bpsd Burkholderia pseudomallei MSHR520
bpz Burkholderia pseudomallei 1026b
bpq Burkholderia pseudomallei BPC006
bpk Burkholderia pseudomallei NCTC 13179
bpsh Burkholderia pseudomallei HBPUB10134a
bpsa Burkholderia pseudomallei NAU35A-3
bpso Burkholderia pseudomallei A79A
but Burkholderia pseudomallei TSV202
bte Burkholderia thailandensis E264
btq Burkholderia thailandensis 2002721723
btj Burkholderia thailandensis E444
btz Burkholderia thailandensis H0587
btd Burkholderia thailandensis MSMB121
btv Burkholderia thailandensis MSMB59
bthe Burkholderia thailandensis E254
bthm Burkholderia thailandensis USAMRU Malaysia #20
btha Burkholderia thailandensis 2003015869
bthl Burkholderia thailandensis 2002721643
bok Burkholderia oklahomensis E0147
boc Burkholderia oklahomensis C6786
buu Burkholderia sp. BDU6
bvi Burkholderia vietnamiensis G4
bve Burkholderia vietnamiensis LMG 10929
bur Burkholderia lata
bcn Burkholderia cenocepacia AU 1054
bch Burkholderia cenocepacia HI2424
bcm Burkholderia cenocepacia MC0-3
bcj Burkholderia cenocepacia J2315
bcen Burkholderia cenocepacia DDS 22E-1
bcew Burkholderia cenocepacia DWS 37E-2
bceo Burkholderia cenocepacia H111
bam Burkholderia ambifaria AMMD
bac Burkholderia ambifaria MC40-6
bmu Burkholderia multivorans ATCC 17616 (JGI)
bmk Burkholderia multivorans DDS 15A-1
bmul Burkholderia multivorans ATCC BAA-247
bct Burkholderia cepacia GG4
bced Burkholderia cepacia DDS 7H-2
bcep Burkholderia cepacia ATCC 25416
bdl Burkholderia dolosa
bpyr Burkholderia pyrrocinia
bcon Burkholderia contaminans
bub Burkholderia ubonensis
bdf Burkholderia diffusa
blat Burkholderia latens
btei Burkholderia territorii
bsem Burkholderia seminalis
bpsl Burkholderia pseudomultivorans
bmec Burkholderia metallica
bstg Burkholderia stagnalis
bstl Burkholderia stabilis
bgl Burkholderia glumae BGR1
bgu Burkholderia glumae LMG 2196 = ATCC 33617
bug Burkholderia sp. CCGE1001
bgf Burkholderia sp. CCGE1003
bgd Burkholderia gladioli BSR3
bgo Burkholderia gladioli ATCC 10248
byi Burkholderia sp. YI23
buk Burkholderia sp. KJ006
buo Burkholderia insecticola
bue Burkholderia sp. RPE67
bul Burkholderia sp. 2002721687
buq Burkholderia sp. HB1
bgp Burkholderia plantarii PG1
bpla Burkholderia plantarii ATCC 43733
bud Burkholderia sp. Bp5365
buz Burkholderia sp. OLGA172
bum Burkholderia sp. PAMC 26561
bui Burkholderia sp. PAMC 28687
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|
Paraburkholderia (18)
|
bxe Paraburkholderia xenovorans LB400
bxb Paraburkholderia xenovorans LB400
bph Paraburkholderia phymatum
bge Paraburkholderia sp. CCGE1002
bpx Paraburkholderia phenoliruptrix
bpy Paraburkholderia phytofirmans
bfn Paraburkholderia fungorum
bcai Paraburkholderia caribensis
pspw Paraburkholderia sprentiae
para Paraburkholderia sp. SOS3
parb Paraburkholderia aromaticivorans
phs Paraburkholderia hospita
pter Paraburkholderia terrae
pgp Paraburkholderia graminis
pcj Paraburkholderia caledonica
pts Paraburkholderia terricola
pcaf Paraburkholderia caffeinilytica
pmeg Paraburkholderia megapolitana
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|
Mycetohabitans (1)
|
brh Paraburkholderia rhizoxinica
|
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Polynucleobacter (4)
|
pnu Polynucleobacter asymbioticus
pdq Polynucleobacter duraquae
poh Polynucleobacter paneuropaeus
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Pandoraea (14)
|
ptx Pandoraea thiooxydans
|
2/59
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Paucimonas (1)
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Ephemeroptericola (1)
|
hyf Ephemeroptericola cinctiostellae
|
4/59
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Lautropia (1)
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Mycoavidus (1)
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Caballeronia (1)
|
Limnobacter (1)
|
Bordetella (24)
|
bpar Bordetella parapertussis Bpp5
bpa Bordetella parapertussis 12822
bbh Bordetella bronchiseptica 253
bbx Bordetella bronchiseptica S798
bpt Bordetella petrii
bhz Bordetella hinzii
btrm Bordetella trematum
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Achromobacter (9)
|
axy Achromobacter xylosoxidans A8
axo Achromobacter xylosoxidans NH44784-1996
axn Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
axx Achromobacter xylosoxidans NCTC10807
adt Achromobacter denitrificans
ais Achromobacter insolitus
achr Achromobacter sp. AONIH1
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|
Taylorella (5)
|
Pusillimonas (3)
|
Advenella (2)
|
Castellaniella (1)
|
Basilea (1)
|
Alcaligenes (3)
|
afa Alcaligenes faecalis ZD02
afq Alcaligenes faecalis JQ135
aaqu Alcaligenes aquatilis
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|
Paenalcaligenes (1)
|
Orrella (1)
|
odi Orrella dioscoreae
|
4/59
|
Oligella (1)
|
Pigmentiphaga (2)
|
pig Pigmentiphaga sp. H8
pacr Pigmentiphaga aceris
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Kerstersia (1)
|
Rhodoferax (6)
|
Polaromonas (5)
|
Acidovorax (11)
|
Verminephrobacter (1)
|
Delftia (4)
|
dac Delftia acidovorans
del Delftia sp. Cs1-4
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Variovorax (6)
|
vap Variovorax paradoxus S110
vpe Variovorax paradoxus EPS
vpd Variovorax paradoxus B4
vaa Variovorax sp. PAMC 28711
vbo Variovorax boronicumulans
vam Variovorax sp. PMC12
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|
Comamonas (5)
|
Alicycliphilus (2)
|
Ramlibacter (1)
|
Symbiobacter (1)
|
Ottowia (2)
|
Limnohabitans (2)
|
lih Limnohabitans sp. 63ED37-2
|
2/59
|
Hydrogenophaga (6)
|
Diaphorobacter (2)
|
Simplicispira (1)
|
Melaminivora (2)
|
Serpentinomonas (2)
|
Methylibium (2)
|
Herminiimonas (1)
|
Janthinobacterium (8)
|
jab Janthinobacterium sp. B9-8
|
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Herbaspirillum (6)
|
Zinderia (1)
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Collimonas (3)
|
cfu Collimonas fungivorans
|
4/59
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Massilia (10)
|
Oxalobacter (1)
|
Undibacterium (2)
|
Noviherbaspirillum (1)
|
Duganella (1)
|
dug Duganella sp. AF9R3
|
4/59
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Sutterella (2)
|
Leptothrix (1)
|
Thiomonas (2)
|
Rubrivivax (2)
|
Roseateles (1)
|
Paucibacter (1)
|
Mitsuaria (1)
|
Rhizobacter (1)
|
Aquabacterium (1)
|
Sphaerotilus (1)
|
Xylophilus (1)
|
unclassified Burkholderiales (3)
|
bbag Burkholderiales bacterium GJ-E10
|
2/59
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Nitrosomonas (7)
|
neu Nitrosomonas europaea
net Nitrosomonas eutropha
nit Nitrosomonas sp. AL212
nii Nitrosomonas sp. Is79A3
nco Nitrosomonas communis
nur Nitrosomonas ureae
nst Nitrosomonas stercoris
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Nitrosospira (2)
|
nmu Nitrosospira multiformis
nlc Nitrosospira lacus
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Sulfuritalea (1)
|
Methyloversatilis (1)
|
Thiobacillus (1)
|
Methylobacillus (1)
|
Methylotenera (2)
|
Methylovorus (2)
|
Methylopumilus (2)
|
Methylophilus (1)
|
Sideroxydans (1)
|
Gallionella (1)
|
Sulfuricella (1)
|
Sulfuriferula (3)
|
Ferriphaselus (1)
|
Nitrotoga (1)
|
Aromatoleum (1)
|
Azospira (1)
|
Rugosibacter (1)
|
Oryzomicrobium (1)
|
unclassified Rhodocyclaceae (1)
|
Dechloromonas (2)
|
Azoarcus (9)
|
Thauera (5)
|
unclassified Zoogloeaceae (1)
|
Ferrovum (1)
|
Accumulibacter (1)
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Tremblaya (3)
|
Kinetoplastibacterium (8)
|
Profftella (1)
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Nasuia (1)
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Vidania (1)
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unclassified Betaproteobacteria (3)
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bprc Beta proteobacterium CB
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Epsilonproteobacteria (187)
|
Helicobacter (76)
Wolinella (1)
Sulfurimonas (5)
Sulfuricurvum (2)
Campylobacter (67)
Arcobacter (13)
Aliiarcobacter (2)
Halarcobacter (2)
Pseudoarcobacter (1)
unclassified Arcobacter (2)
Sulfurospirillum (7)
Hydrogenimonas (1)
Nitratifractor (1)
Nitratiruptor (1)
Sulfurovum (2)
Nautilia (2)
Caminibacter (1)
Cetia (1)
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|
Deltaproteobacteria (90)
|
Geobacter (11)
|
Geoalkalibacter (1)
|
Pelobacter (4)
|
Desulfuromonas (2)
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Desulfovibrio (18)
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Pseudodesulfovibrio (5)
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Lawsonia (2)
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Desulfomicrobium (2)
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Desulfohalobium (1)
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Desulfotalea (1)
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Desulfurivibrio (1)
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Desulfobulbus (2)
|
Desulfocapsa (1)
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Desulfococcus (2)
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Desulfatibacillum (1)
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Desulfobacterium (1)
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Desulfobacula (1)
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Desulfosarcina (3)
|
Anaeromyxobacter (4)
|
Myxococcus (3)
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Corallococcus (3)
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ccx Corallococcus coralloides
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3/59
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Stigmatella (1)
|
sur Stigmatella aurantiaca
|
7/59
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Archangium (1)
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age Archangium gephyra
|
9/59
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Melittangium (1)
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mbd Melittangium boletus
|
4/59
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Cystobacter (1)
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cfus Cystobacter fuscus
|
8/59
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Vulgatibacter (1)
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Sorangium (2)
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Chondromyces (1)
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Sandaracinus (1)
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samy Sandaracinus amylolyticus
|
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Labilithrix (1)
|
llu Labilithrix luteola
|
3/59
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Minicystis (1)
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mrm Minicystis rosea
|
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Haliangium (1)
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Syntrophus (1)
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Desulfobacca (1)
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Desulfomonile (1)
|
Syntrophobacter (1)
|
Desulfoglaeba (1)
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Desulfarculus (1)
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Hippea (1)
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Desulfurella (1)
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Bradymonas (1)
|
bsed Bradymonas sediminis
|
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|
Alphaproteobacteria (705)
|
Rickettsia (48)
|
Orientia (2)
|
Phycorickettsia (1)
|
Wolbachia (10)
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Anaplasma (10)
|
Ehrlichia (14)
|
Neorickettsia (4)
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Midichloria (1)
|
Fokinia (1)
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unclassified Rickettsiales (2)
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Paracaedibacter (1)
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Paracaedimonas (1)
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Nucleicultrix (1)
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unclassified Holosporaceae (1)
|
Mesorhizobium (11)
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Chelativorans (1)
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Hoeflea (1)
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Aminobacter (2)
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Phyllobacterium (1)
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Roseitalea (1)
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Nitratireductor (1)
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Oricola (1)
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Parvibaculum (1)
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Pyruvatibacter (1)
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unclassified Rhodobiaceae (1)
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Sinorhizobium (15)
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Ensifer (4)
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Agrobacterium (10)
|
Rhizobium (26)
|
Neorhizobium (4)
|
Liberibacter (7)
|
Shinella (1)
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Georhizobium (1)
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Brucella (44)
|
Ochrobactrum (4)
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Bradyrhizobium (18)
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Rhodopseudomonas (7)
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Nitrobacter (2)
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Oligotropha (3)
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Bosea (5)
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Variibacter (1)
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Bartonella (24)
|
Xanthobacter (1)
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Azorhizobium (1)
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Starkeya (1)
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Labrys (1)
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Ancylobacter (2)
|
Methylorubrum (6)
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Methylobacterium (14)
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Microvirga (3)
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Beijerinckia (1)
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Methylocella (2)
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Methylovirgula (1)
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unclassified Beijerinckiaceae (1)
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Chelatococcus (2)
|
Hyphomicrobium (4)
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Rhodomicrobium (1)
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rva Rhodomicrobium vannielii
|
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Pelagibacterium (1)
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Filomicrobium (2)
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Devosia (3)
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Blastochloris (2)
|
bvr Blastochloris viridis
blag Blastochloris sp. GI
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Rhodoplanes (1)
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Maritalea (1)
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Youhaiella (1)
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Methylocystis (5)
|
Methylosinus (1)
|
Pleomorphomonas (1)
|
Martelella (3)
|
Aureimonas (1)
|
Breoghania (1)
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brn Breoghania sp. L-A4
|
4/59
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Hodgkinia (4)
|
Methyloceanibacter (1)
|
mcg Methyloceanibacter caenitepidi
|
4/59
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Tokpelaia (1)
|
Pseudorhodoplanes (1)
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Hartmannibacter (1)
|
Nordella (1)
|
Methyloligella (1)
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unclassified Rhizobiales (1)
|
Caulobacter (8)
|
Phenylobacterium (2)
|
Brevundimonas (10)
|
bsb Brevundimonas subvibrioides
brd Brevundimonas sp. DS20
brg Brevundimonas sp. GW460-12-10-14-LB2
brl Brevundimonas sp. LM2
bvc Brevundimonas vesicularis
brf Brevundimonas sp. MF30-B
brev Brevundimonas sp. SGAir0440
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Asticcacaulis (1)
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unclassified Caulobacteraceae (1)
|
Ruegeria (4)
|
sil Ruegeria pomeroyi
rua Ruegeria sp. AD91A
rut Ruegeria sp. THAF33
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Epibacterium (1)
|
Rhodobacter (7)
|
Jannaschia (1)
|
jan Jannaschia sp. CCS1
|
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Roseobacter (3)
|
rde Roseobacter denitrificans
rli Roseobacter litoralis
rpon Roseobacter ponti
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Paracoccus (13)
|
Dinoroseobacter (1)
|
Ketogulonicigenium (3)
|
Pseudovibrio (1)
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Phaeobacter (6)
|
pga Phaeobacter inhibens DSM 17395
pgl Phaeobacter inhibens 2.10
pgd Phaeobacter gallaeciensis DSM 26640
ppic Phaeobacter piscinae
phq Phaeobacter sp. LSS9
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Octadecabacter (4)
|
oat Octadecabacter antarcticus
oar Octadecabacter arcticus
|
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Leisingera (3)
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lej Leisingera sp. NJS204
|
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Roseibacterium (1)
|
Planktomarina (1)
|
Celeribacter (4)
|
Marinovum (1)
|
Confluentimicrobium (1)
|
Rhodovulum (3)
|
Pannonibacter (1)
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Halocynthiibacter (1)
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Labrenzia (5)
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lap Labrenzia sp. CP4
lagg Labrenzia aggregata
labr Labrenzia sp. VG12
labt Labrenzia sp. THAF35
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Defluviimonas (1)
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Yangia (2)
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Sulfitobacter (6)
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sulz Sulfitobacter sp. SK012
suli Sulfitobacter sp. JL08
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Donghicola (1)
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Salipiger (1)
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Tateyamaria (1)
|
tom Tateyamaria omphalii
|
4/59
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Pelagibaca (1)
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Thioclava (1)
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Roseovarius (5)
|
rom Roseovarius sp. MME-070
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4/59
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Yoonia (1)
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Antarctobacter (1)
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Rhodobaca (1)
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Sagittula (1)
|
Thalassococcus (1)
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thaa Thalassococcus sp. S3
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4/59
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Gemmobacter (1)
|
Tabrizicola (1)
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Silicimonas (1)
|
salo Silicimonas algicola
|
2/59
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Sedimentitalea (1)
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Haematobacter (1)
|
Boseongicola (1)
|
Pseudorhodobacter (1)
|
Litoreibacter (1)
|
Oceanicola (1)
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Maribius (1)
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Roseivivax (1)
|
Paraoceanicella (1)
|
Stappia (1)
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Pseudohalocynthiibacter (1)
|
Monaibacterium (1)
|
Mameliella (1)
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Thalassobius (1)
|
unclassified Rhodobacteraceae (4)
|
Maricaulis (1)
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Hyphomonas (1)
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Hirschia (1)
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Glycocaulis (1)
|
Hyphomonadaceae (1)
|
Zymomonas (8)
|
Novosphingobium (10)
|
nar Novosphingobium aromaticivorans
npp Novosphingobium sp. PP1Y
npn Novosphingobium pentaromativorans
nre Novosphingobium resinovorum
nov Novosphingobium sp. P6W
not Novosphingobium sp. THN1
ntd Novosphingobium tardaugens
nor Novosphingobium sp. ABRDHK2
ngf Novosphingobium ginsenosidimutans
nog Novosphingobium sp. Gsoil 351
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|
Sphingopyxis (12)
|
sal Sphingopyxis alaskensis
sphk Sphingopyxis fribergensis
sphp Sphingopyxis sp. 113P3
ster Sphingopyxis terrae
sphl Sphingopyxis sp. LPB0140
sphq Sphingopyxis sp. QXT-31
sphx Sphingopyxis sp. PAMC25046
sphu Uncultured Sphingopyxis sp. UC10
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Sphingomonas (18)
|
stax Sphingomonas taxi
ssan Sphingomonas sanxanigenens
snj Sphingomonas sp. NIC1
smy Sphingomonas melonis
span Sphingomonas panacis
skr Sphingomonas koreensis
splm Sphingomonas sp. LM7
splk Sphingomonas sp. LK11
spkc Sphingomonas sp. KC8
sphc Sphingomonas sp. Cra20
sphf Sphingomonas sp. FARSPH
spha Sphingomonas sp. YZ-8
spau Sphingomonas paucimobilis
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Sphingobium (16)
|
sjp Sphingobium japonicum
sch Sphingobium chlorophenolicum
ssy Sphingobium sp. SYK-6
syb Sphingobium sp. YBL2
spmi Sphingobium sp. MI1205
sphb Sphingobium sp. EP60837
sphr Sphingobium sp. RAC03
sinb Sphingobium indicum
spht Sphingobium sp. TKS
shyd Sphingobium hydrophobicum
sya Sphingobium yanoikuyae
spyg Sphingobium sp. YG1
sufl Sphingobium fuliginis
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|
Citromicrobium (1)
|
cij Citromicrobium sp. JL477
|
4/59
|
Sphingorhabdus (3)
|
Blastomonas (2)
|
blas Blastomonas sp. RAC04
bfw Blastomonas fulva
|
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|
Rhizorhabdus (1)
|
Sphingosinicella (2)
|
smic Sphingosinicella microcystinivorans
sphs Sphingosinicella sp. BN140058
|
4/59
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|
Tardibacter (1)
|
Sphingosinithalassobacter (1)
|
spzr Sphingosinithalassobacter sp. zrk23
|
6/59
|
Hankyongella (1)
|
Parasphingopyxis (1)
|
Erythrobacter (8)
|
ery Erythrobacter atlanticus
efv Erythrobacter flavus
erk Erythrobacter sp. KY5
err Erythrobacter sp. YH-07
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|
Altererythrobacter (7)
|
aay Altererythrobacter atlanticus
ado Altererythrobacter dongtanensis
alb Altererythrobacter sp. B11
alh Altererythrobacter sp. BO-6
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|
Croceicoccus (2)
|
cna Croceicoccus naphthovorans
cman Croceicoccus marinus
|
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|
Porphyrobacter (4)
|
Gluconobacter (5)
|
Granulobacter (4)
|
Acidiphilium (2)
|
Gluconacetobacter (2)
|
Komagataeibacter (6)
|
Acetobacter (19)
|
Asaia (1)
|
Kozakia (1)
|
Roseomonas (3)
|
Neoasaia (1)
|
Commensalibacter (2)
|
Stella (2)
|
Neokomagataea (2)
|
Swingsia (2)
|
Bombella (2)
|
Rhodospirillum (3)
|
Pararhodospirillum (1)
|
Magnetospirillum (5)
|
Azospirillum (10)
|
Tistrella (1)
|
Endolissoclinum (2)
|
Thalassospira (3)
|
Magnetospira (1)
|
Haematospirillum (1)
|
Nitrospirillum (1)
|
Niveispirillum (1)
|
Ferrovibrio (1)
|
Hypericibacter (2)
|
Parvularcula (1)
|
Magnetococcus (1)
|
Pelagibacter (3)
|
unclassified Pelagibacteraceae (2)
|
Emcibacter (1)
|
Micavibrio (2)
|
Polymorphum (1)
|
Phreatobacter (2)
|
Puniceispirillum (1)
|
Oligoflexia (12)
|
Bdellovibrio (8)
|
bbac Bdellovibrio bacteriovorus 109J
bdq Bdellovibrio sp. qaytius
|
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Halobacteriovorax (2)
|
Bacteriovorax (1)
|
unclassified Silvanigrellales (1)
|
sbf Silvanigrellales bacterium RF1110005
|
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Other proteobacteria (10)
|
Acidithiobacillus (7)
|
afr Acidithiobacillus ferrooxidans ATCC 23270
afe Acidithiobacillus ferrooxidans ATCC 53993
acu Acidithiobacillus caldus SM-1
acz Acidithiobacillus caldus ATCC 51756
afi Acidithiobacillus ferrivorans
afj Acidithiobacillus ferridurans
atx Acidithiobacillus thiooxidans
|
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|
Mariprofundus (2)
|
Hydrogenophilus (1)
|
Firmicutes - Bacilli (817)
|
Bacillus (140)
|
bmq Bacillus megaterium QM B1551
bmd Bacillus megaterium DSM 319
bmh Bacillus megaterium WSH-002
bmeg Bacillus megaterium NBRC 15308 = ATCC 14581
bco Bacillus cellulosilyticus
bif Bacillus infantis
baco Bacillus sp. OxB-1
beo Bacillus filamentosus
bsj Bacillus simplex
bko Bacillus kochii
bmur Bacillus muralis
bacq Bacillus sp. Y1
|
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|
Oceanobacillus (3)
|
oih Oceanobacillus iheyensis
ocn Oceanobacillus sp. 160
|
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|
Geobacillus (18)
|
Parageobacillus (3)
|
Anoxybacillus (6)
|
Amphibacillus (1)
|
axl Amphibacillus xylanus
|
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|
Lysinibacillus (8)
|
lsp Lysinibacillus sphaericus
lgy Lysinibacillus varians
lfu Lysinibacillus fusiformis
lys Lysinibacillus sp. YS11
lyb Lysinibacillus sp. B2A1
lyz Lysinibacillus sp. 2017
lyg Lysinibacillus sp. SGAir0095
lpak Lysinibacillus pakistanensis
|
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|
Halobacillus (3)
|
Terribacillus (1)
|
Virgibacillus (7)
|
vir Virgibacillus sp. SK37
vhl Virgibacillus halodenitrificans
vig Virgibacillus sp. 6R
vil Virgibacillus phasianinus
vne Virgibacillus necropolis
vpn Virgibacillus dokdonensis
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|
Lentibacillus (1)
|
lao Lentibacillus amyloliquefaciens
|
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|
Fictibacillus (2)
|
Salimicrobium (1)
|
Aeribacillus (1)
|
Aquibacillus (1)
|
Psychrobacillus (2)
|
psyh Psychrobacillus sp. AK 1817
psyo Psychrobacillus glaciei
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|
Pradoshia (1)
|
Gracilibacillus (1)
|
Salicibibacter (2)
|
Pontibacillus (1)
|
Sporolactobacillus (1)
|
unclassified Sporolactobacillaceae (1)
|
Staphylococcus (92)
|
ssp Staphylococcus saprophyticus
sxy Staphylococcus xylosus HKUOPL8
sxl Staphylococcus xylosus SMQ-121
sxo Staphylococcus xylosus C2a
seqo Staphylococcus equorum
scoh Staphylococcus cohnii
snl Staphylococcus nepalensis
skl Staphylococcus kloosii
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|
Macrococcus (3)
|
Salinicoccus (1)
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Auricoccucs (1)
|
Listeria (47)
|
Brochothrix (1)
|
Exiguobacterium (5)
|
esi Exiguobacterium sibiricum
ean Exiguobacterium antarcticum
exm Exiguobacterium sp. MH3
exu Exiguobacterium sp. U13-1
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|
Gemella (5)
|
Brevibacillus (5)
|
Paenibacillus (49)
|
pjd Paenibacillus sp. JDR-2
gym Paenibacillus sp. Y412MC10
pms Paenibacillus mucilaginosus KNP414
pmq Paenibacillus mucilaginosus 3016
pmw Paenibacillus mucilaginosus K02
pih Paenibacillus sp. IHBB 10380
pnp Paenibacillus naphthalenovorans
pow Paenibacillus sp. 32O-W
pcx Paenibacillus crassostreae
pvo Paenibacillus vortex
plw Paenibacillus lautus
palb Paenibacillus albus
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|
Thermobacillus (1)
|
Aneurinibacillus (2)
|
asoc Aneurinibacillus soli
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Cohnella (2)
|
Saccharibacillus (1)
|
Alicyclobacillus (2)
|
Kyrpidia (2)
|
Tumebacillus (2)
|
Solibacillus (3)
|
siv Solibacillus silvestris StLB046
ssil Solibacillus silvestris DSM 12223
sob Solibacillus sp. R5-41
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|
Planococcus (11)
|
pln Planococcus sp. PAMC 21323
pku Planococcus kocurii
prt Planococcus rifietoensis
pll Planococcus versutus
pana Planococcus antarcticus
pdg Planococcus donghaensis
phc Planococcus halocryophilus
pmar Planococcus sp. Y42
ppla Planococcus plakortidis
pfae Planococcus faecalis
plx Planococcus sp. MB-3u-03
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|
Jeotgalibacillus (1)
|
Kurthia (2)
|
kur Kurthia sp. 11kri321
kzo Kurthia zopfii
|
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Sporosarcina (6)
|
spsy Sporosarcina psychrophila
spor Sporosarcina sp. P33
spop Sporosarcina sp. P37
sure Sporosarcina ureae
spos Sporosarcina sp. PTS2304
|
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|
Rummeliibacillus (1)
|
rst Rummeliibacillus stabekisii
|
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Paenisporosarcina (2)
|
paek Paenisporosarcina sp. K2R23-3
panc Paenisporosarcina antarctica
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Planomicrobium (2)
|
pgq Planomicrobium glaciei
play Planomicrobium sp. Y50
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|
Novibacillus (1)
|
Laceyella (1)
|
Thermoactinomyces (1)
|
Kroppenstedtia (2)
|
kpul Kroppenstedtia pulmonis
keb Kroppenstedtia eburnea
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Lactococcus (19)
|
Streptococcus (149)
|
Lactobacillus (101)
|
Pediococcus (6)
|
Enterococcus (23)
|
Melissococcus (2)
|
Tetragenococcus (4)
|
Vagococcus (5)
|
Oenococcus (3)
|
Leuconostoc (13)
|
Weissella (11)
|
Aerococcus (7)
|
Abiotrophia (1)
|
unclassified Aerococcaceae (1)
|
Carnobacterium (6)
|
Marinilactibacillus (1)
|
Jeotgalibaca (5)
|
Dolosigranulum (1)
|
Firmicutes - Clostridia (231)
|
Clostridium (54)
|
Alkaliphilus (2)
|
Arthromitus (4)
|
Geosporobacter (1)
|
Hathewaya (1)
|
Caloramator (1)
|
Crassaminicella (1)
|
Caloranaerobacter (1)
|
Mageeibacillus (1)
|
Fastidiosipila (1)
|
Hungateiclostridium (4)
|
unclassified Hungateiclostridiaceae (1)
|
Ruminiclostridium (1)
|
Thermoclostridium (2)
|
Pseudoclostridium (1)
|
unclassified Ruminococcaceae (4)
|
Flavonifractor (1)
|
Ethanoligenens (1)
|
Ruminococcus (5)
|
Faecalibacterium (2)
|
Caproiciproducens (1)
|
Butyrivibrio (3)
|
Cellulosilyticum (2)
|
Roseburia (3)
|
Coprococcus (2)
|
Blautia (6)
|
Lachnoclostridium (3)
|
Lacrimispora (2)
|
Anaerostipes (2)
|
Herbinix (1)
|
Anaerotignum (1)
|
Lachnoanaerobaculum (1)
|
Anaerobutyricum (1)
|
Pseudobutyrivibrio (1)
|
Anaerocolumna (1)
|
Lachnospira (1)
|
Mediterraneibacter (1)
|
Enterocloster (1)
|
unclassified Lachnospiraceae (4)
|
Clostridioides (5)
|
Peptoclostridium (1)
|
Acetoanaerobium (1)
|
Filifactor (1)
|
Paeniclostridium (1)
|
Romboutsia (1)
|
Peptacetobacter (1)
|
unclassified Peptostreptococcaceae (1)
|
Symbiobacterium (1)
|
Syntrophomonas (1)
|
Syntrophothermus (1)
|
Syntrophocurvum (1)
|
Desulfitobacterium (5)
|
Desulfotomaculum (4)
|
Desulfofarcimen (1)
|
Desulfofundulus (1)
|
Desulfallas (1)
|
Pelotomaculum (1)
|
Desulforudis (1)
|
Thermincola (1)
|
Syntrophobotulus (1)
|
Desulfosporosinus (3)
|
Dehalobacter (3)
|
Heliobacterium (1)
|
Heliorestis (1)
|
Eubacterium (3)
|
Acetobacterium (1)
|
Oscillibacter (1)
|
Dysosmobacter (1)
|
Thermaerobacter (3)
|
Sulfobacillus (3)
|
Carboxydocella (1)
|
Christensenella (1)
|
Intestinimonas (1)
|
Mogibacterium (1)
|
Aminipila (3)
|
unclassified Clostridiales (4)
|
Caldanaerobacter (1)
|
Thermoanaerobacter (8)
|
Carboxydothermus (1)
|
Tepidanaerobacter (2)
|
Moorella (3)
|
Ammonifex (1)
|
Thermacetogenium (1)
|
Caldicellulosiruptor (9)
|
Thermosediminibacter (1)
|
Thermoanaerobacterium (4)
|
Thermodesulfobium (2)
|
Mahella (1)
|
Natranaerobius (1)
|
Halothermothrix (1)
|
hor Halothermothrix orenii
|
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Halanaerobium (2)
|
has Halanaerobium hydrogeniformans
hpk Halanaerobium praevalens
|
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|
Halocella (1)
|
hals Halocella sp. SP3-1
|
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|
Acetohalobium (1)
|
Halobacteroides (1)
|
Anoxybacter (1)
|
Firmicutes - Others (46)
|
Finegoldia (1)
|
Anaerococcus (1)
|
Parvimonas (1)
|
Peptoniphilus (3)
|
Gottschalkia (1)
|
Sporanaerobacter (1)
|
Veillonella (4)
|
Megasphaera (3)
|
Dialister (2)
|
Selenomonas (5)
|
sri Selenomonas ruminantium
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Megamonas (2)
|
Pelosinus (2)
|
Methylomusa (1)
|
Sporomusa (1)
|
Acidaminococcus (2)
|
Phascolarctobacterium (1)
|
Erysipelothrix (5)
|
Faecalitalea (1)
|
Turicibacter (2)
|
Faecalibaculum (1)
|
Absiella (2)
|
Erysipelatoclostridium (1)
|
unclassified Erysipelotrichaceae (2)
|
Limnochorda (1)
|
Tenericutes (160)
|
Mycoplasma (99)
Ureaplasma (4)
Hepatoplasma (1)
Phytoplasma (8)
Acholeplasma (6)
Mesoplasma (8)
Entomoplasma (4)
Spiroplasma (27)
Izimaplasma (1)
unclassified Tenericutes (2)
|
|
Actinobacteria (752)
|
Mycobacterium (73)
|
mtu Mycobacterium tuberculosis H37Rv
mtv Mycobacterium tuberculosis H37Rv
mtc Mycobacterium tuberculosis CDC1551
mra Mycobacterium tuberculosis H37Ra
mtf Mycobacterium tuberculosis F11
mtb Mycobacterium tuberculosis KZN 1435
mtk Mycobacterium tuberculosis KZN 4207
mtz Mycobacterium tuberculosis KZN 605
mtg Mycobacterium tuberculosis RGTB327
mti Mycobacterium tuberculosis RGTB423
mte Mycobacterium tuberculosis CCDC5079
mtur Mycobacterium tuberculosis CCDC5079
mtl Mycobacterium tuberculosis CCDC5180
mto Mycobacterium tuberculosis CTRI-2
mtn Mycobacterium tuberculosis Erdman = ATCC 35801
mtj Mycobacterium tuberculosis Beijing/NITR203
mtub Mycobacterium tuberculosis 7199-99
mtuc Mycobacterium tuberculosis CAS/NITR204
mtue Mycobacterium tuberculosis EAI5/NITR206
mtx Mycobacterium tuberculosis EAI5
mtuh Mycobacterium tuberculosis Haarlem/NITR202
mtul Mycobacterium tuberculosis Haarlem
mtut Mycobacterium tuberculosis BT1
mtuu Mycobacterium tuberculosis BT2
mtq Mycobacterium tuberculosis HKBS1
mbo Mycobacterium tuberculosis variant bovis AF2122/97
mbb Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
mbt Mycobacterium tuberculosis variant bovis BCG Tokyo 172
mbm Mycobacterium tuberculosis variant bovis BCG Mexico
mbk Mycobacterium tuberculosis variant bovis BCG Korea 1168P
mbx Mycobacterium tuberculosis variant bovis BCG ATCC 35743
maf Mycobacterium tuberculosis variant africanum
mmic Mycobacterium tuberculosis variant microti
mce Mycobacterium canettii CIPT 140010059
mcq Mycobacterium canettii CIPT 140060008
mcv Mycobacterium canettii CIPT 140070008
mcx Mycobacterium canettii CIPT 140070010
mcz Mycobacterium canettii CIPT 140070017
mpa Mycobacterium avium subsp. paratuberculosis K-10
mao Mycobacterium avium subsp. paratuberculosis MAP4
mavi Mycobacterium avium subsp. paratuberculosis E1
mavu Mycobacterium avium subsp. paratuberculosis E93
mav Mycobacterium avium 104
mit Mycobacterium intracellulare MOTT-02
mia Mycobacterium intracellulare ATCC 13950
mid Mycobacterium intracellulare subsp. intracellulare
myo Mycobacterium intracellulare subsp. yongonense
mir Mycobacterium paraintracellulare
mchi Mycobacterium chimaera
mmal Mycobacterium marseillense
msa Mycobacterium sp. JS623
mul Mycobacterium ulcerans
mmc Mycobacterium sp. MCS
mkm Mycobacterium sp. KMS
mjl Mycobacterium sp. JLS
mmi Mycobacterium marinum M
mmae Mycobacterium marinum E11
mmm Mycobacterium sp. MOTT36Y
mkn Mycobacterium kansasii ATCC 12478
myv Mycobacterium sp. VKM Ac-1817D
mye Mycobacterium sp. EPa45
mhad Mycobacterium haemophilum
myn Mycobacterium sp. NRRL B-3805
mdx Mycobacterium dioxanotrophicus
mshg Mycobacterium shigaense
mfj Mycobacterium florentinum
mgro Mycobacterium grossiae
mxe Mycobacterium xenopi
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|
Mycolicibacterium (21)
|
msm Mycolicibacterium smegmatis MC2 155
msg Mycolicibacterium smegmatis MC2 155
msb Mycolicibacterium smegmatis MC2 155
msn Mycolicibacterium smegmatis INHR1
msh Mycolicibacterium smegmatis INHR2
mva Mycolicibacterium vanbaalenii
mgi Mycolicibacterium gilvum PYR-GCK
msp Mycolicibacterium gilvum Spyr1
mcb Mycolicibacterium chubuense
mne Mycolicibacterium neoaurum
mgo Mycolicibacterium goodii
mft Mycolicibacterium fortuitum
mphl Mycolicibacterium phlei
mvq Mycolicibacterium vaccae
mll Mycolicibacterium litorale
mrh Mycolicibacterium rhodesiae
mthn Mycolicibacterium thermoresistibile
mhas Mycolicibacterium hassiacum
mdu Mycolicibacterium duvalii
mcht Mycolicibacterium chitae
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|
Mycobacteroides (9)
|
mab Mycobacteroides abscessus ATCC 19977
mmv Mycobacteroides abscessus subsp. massiliense GO 06
mabb Mycobacteroides abscessus subsp. bolletii 50594
mabl Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
mche Mycobacteroides chelonae
miz Mycobacteroides immunogenum
mste Mycobacterium stephanolepidis
msao Mycobacteroides saopaulense
msal Mycobacteroides salmoniphilum
|
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|
Mycolicibacter (3)
|
mjd Mycolicibacter sinensis
mter Mycolicibacter terrae
mmin Mycolicibacter minnesotensis
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|
Hoyosella (1)
|
Mycolicibacillus (1)
|
mkr Mycolicibacillus koreensis
|
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Corynebacterium (100)
|
Nocardia (10)
|
nfa Nocardia farcinica IFM 10152
nfr Nocardia farcinica NCTC11134
ncy Nocardia cyriacigeorgica
nbr Nocardia brasiliensis
nno Nocardia nova
nsl Nocardia mangyaensis
nsr Nocardia seriolae
noz Nocardia sp. CS682
nod Nocardia otitidiscaviarum
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|
Rhodococcus (21)
|
rha Rhodococcus jostii
rer Rhodococcus erythropolis PR4
rey Rhodococcus erythropolis CCM2595
reb Rhodococcus erythropolis BG43
rop Rhodococcus opacus B4
roa Rhodococcus opacus PD630
req Rhodococcus hoagii
rav Rhodococcus aetherivorans
rrz Rhodococcus ruber
rqi Rhodococcus qingshengii
rhq Rhodococcus sp. p52
rhod Rhodococcus sp. 008
rrt Rhodococcus rhodochrous
rby Rhodococcus biphenylivorans
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Gordonia (11)
|
gbr Gordonia bronchialis
gpo Gordonia polyisoprenivorans
gor Gordonia sp. KTR9
goq Gordonia phthalatica
gta Gordonia terrae
goc Gordonia sp. YC-JH1
gru Gordonia rubripertincta
gom Gordonia insulae
gav Gordonia alkanivorans
god Gordonia sp. 135
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Tsukamurella (2)
|
Segniliparus (1)
|
Dietzia (5)
|
dtm Dietzia timorensis
diz Dietzia sp. JS16-p6b
dpc Dietzia psychralcaliphila
dlu Dietzia lutea
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|
Lawsonella (1)
|
Tomitella (1)
|
toy Tomitella sp. HY188
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Streptomyces (71)
|
ssx Streptomyces sp. SirexAA-E
salu Streptomyces albulus NK660
sall Streptomyces albulus ZPM
stre Streptomyces sp. 769
sxi Streptomyces xiamenensis
snr Streptomyces noursei
salf Streptomyces alboflavus
sgd Streptomyces griseoviridis
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|
Kitasatospora (4)
|
Streptacidiphilus (1)
|
Tropheryma (2)
|
Luteimicrobium (1)
|
Leifsonia (3)
|
Clavibacter (5)
|
Microbacterium (18)
|
Rhodoluna (2)
|
Aquiluna (1)
|
Rathayibacter (7)
|
Curtobacterium (4)
|
Microterricola (1)
|
Frondihabitans (1)
|
Agromyces (3)
|
Cryobacterium (2)
|
Cnuibacter (1)
|
Aurantimicrobium (3)
|
Pontimonas (1)
|
Microcella (1)
|
Mycetocola (1)
|
Salinibacterium (3)
|
Humibacter (2)
|
Gryllotalpicola (1)
|
Protaetiibacter (1)
|
Lysinimonas (1)
|
Plantibacter (1)
|
Leucobacter (3)
|
Agrococcus (1)
|
Marisediminicola (1)
|
Herbiconiux (1)
|
Arthrobacter (18)
|
Psychromicrobium (1)
|
Paenarthrobacter (1)
|
Pseudarthrobacter (5)
|
Glutamicibacter (4)
|
Renibacterium (1)
|
Kocuria (6)
|
Micrococcus (2)
|
Rothia (3)
|
Sinomonas (1)
|
Neomicrococcus (1)
|
Auritidibacter (1)
|
Citricoccus (1)
|
Beutenbergia (1)
|
Brachybacterium (7)
|
Dermabacter (2)
|
Jonesia (1)
|
Kytococcus (1)
|
Dermacoccus (2)
|
Luteipulveratus (1)
|
Xylanimonas (2)
|
Isoptericola (2)
|
Cellulosimicrobium (2)
|
Xylanimicrobium (1)
|
Sanguibacter (2)
|
Cellulomonas (7)
|
Oerskovia (1)
|
Pseudactinotalea (1)
|
Intrasporangium (1)
|
Arsenicicoccus (1)
|
Serinicoccus (2)
|
Janibacter (3)
|
Ornithinimicrobium (2)
|
Tetrasphaera (1)
|
Phycicoccus (1)
|
Brevibacterium (4)
|
Dermatophilus (1)
|
Georgenia (1)
|
Cutibacterium (14)
|
Propionibacterium (5)
|
Pseudopropionibacterium (1)
|
Acidipropionibacterium (4)
|
Microlunatus (3)
|
Tessaracoccus (4)
|
Raineyella (1)
|
Propioniciclava (1)
|
Nocardioides (8)
|
ndk Nocardioides dokdonensis
|
2/59
|
Kribbella (1)
|
Pimelobacter (1)
|
psim Pimelobacter simplex
|
3/59
|
Aeromicrobium (4)
|
aeb Aeromicrobium sp. A1-2
|
2/59
|
Micropruina (1)
|
Thermobifida (1)
|
Nocardiopsis (3)
|
Streptomonospora (1)
|
Thermomonospora (1)
|
Actinomadura (1)
|
actw Actinomadura sp. WMMB499
|
3/59
|
Streptosporangium (1)
|
Nonomuraea (2)
|
noa Nonomuraea sp. ATCC 55076
|
5/59
|
Frankia (5)
|
fri Frankia inefficax
|
4/59
|
Acidothermus (1)
|
Nakamurella (2)
|
Geodermatophilus (1)
|
Blastococcus (1)
|
Modestobacter (1)
|
Kineococcus (1)
|
Saccharopolyspora (3)
|
sen Saccharopolyspora erythraea
|
3/59
|
Saccharomonospora (2)
|
Amycolatopsis (11)
|
Pseudonocardia (8)
|
Actinosynnema (2)
|
Saccharothrix (2)
|
sesp Saccharothrix espanaensis
|
3/59
|
Kutzneria (1)
|
Kibdelosporangium (1)
|
kphy Kibdelosporangium phytohabitans
|
2/59
|
Lentzea (1)
|
Actinoalloteichus (5)
|
Alloactinosynnema (1)
|
Prauserella (1)
|
Salinispora (2)
|
Micromonospora (6)
|
Verrucosispora (1)
|
Actinoplanes (5)
|
Plantactinospora (3)
|
Phytohabitans (2)
|
Catenulispora (1)
|
Stackebrandtia (1)
|
Arcanobacterium (2)
|
Mobiluncus (1)
|
Trueperella (3)
|
Actinotignum (2)
|
Schaalia (2)
|
Actinomyces (11)
|
Flaviflexus (2)
|
Bifidobacterium (56)
|
Gardnerella (3)
|
Scardovia (1)
|
Parascardovia (1)
|
Thermobispora (1)
|
Actinopolyspora (1)
|
Planktophila (6)
|
Nanopelagicus (3)
|
Epidermidibacterium (1)
|
unclassified Actinobacteria (1)
|
abai Actinobacteria bacterium
|
5/59
|
Rubrobacter (3)
|
Baekduia (1)
|
Conexibacter (1)
|
Acidimicrobium (1)
|
Ilumatobacter (1)
|
Cryptobacterium (1)
|
Slackia (1)
|
Eggerthella (2)
|
Gordonibacter (1)
|
Adlercreutzia (1)
|
Denitrobacterium (1)
|
Atopobium (1)
|
Olsenella (2)
|
Parolsenella (1)
|
Coriobacterium (1)
|
Collinsella (1)
|
unclassified Coriobacteriaceae (1)
|
Egibacter (1)
|
Euzebya (1)
|
Cyanobacteria (128)
|
Synechocystis (8)
|
syn Synechocystis sp. PCC 6803
syz Synechocystis sp. PCC 6803
syy Synechocystis sp. PCC 6803 GT-S
syt Synechocystis sp. PCC 6803 GT-I
sys Synechocystis sp. PCC 6803 PCC-N
syq Synechocystis sp. PCC 6803 PCC-P
syj Synechocystis sp. PCC 6714
syo Synechocystis sp. IPPAS B-1465
|
2/59
2/59
2/59
2/59
2/59
2/59
2/59
2/59
|
Synechococcus (23)
|
syne Synechococcus sp. PCC 6312
synp Synechococcus sp. PCC 7502
slw Synechococcus lividus
|
6/59
2/59
2/59
|
Thermosynechococcus (4)
|
tel Thermosynechococcus elongatus
thn Thermosynechococcus sp. NK55
tvn Thermosynechococcus vulcanus
thec Thermosynechococcus sp. CL-1
|
2/59
2/59
2/59
2/59
|
Cyanobium (2)
|
cyi Cyanobium sp. NIES-981
|
4/59
|
Dactylococcopsis (1)
|
Chamaesiphon (1)
|
Leptolyngbya (4)
|
len Leptolyngbya sp. NIES-3755
lbo Leptolyngbya boryana
|
2/59
2/59
|
Halomicronema (1)
|
hhg Halomicronema hongdechloris
|
6/59
|
Pseudanabaena (2)
|
Prochlorococcus (14)
|
Acaryochloris (1)
|
amr Acaryochloris marina
|
2/59
|
Thermoleptolyngbya (1)
|
Gloeocapsa (1)
|
Geminocystis (2)
|
gen Geminocystis sp. NIES-3709
gee Geminocystis sp. NIES-3708
|
2/59
2/59
|
Chondrocystis (1)
|
Microcystis (4)
|
mar Microcystis aeruginosa
mpk Microcystis panniformis
miq Microcystis sp. MC19
mvz Microcystis viridis
|
6/59
2/59
2/59
2/59
|
Cyanobacterium (3)
|
can Cyanobacterium aponinum
|
2/59
|
Halothece (1)
|
Euhalothece (1)
|
Atelocyanobacterium (1)
|
cyu Candidatus Atelocyanobacterium thalassa
|
2/59
|
Crocosphaera (2)
|
cyt Crocosphaera subtropica
cwa Crocosphaera watsonii
|
2/59
2/59
|
Rippkaea (2)
|
cyp Rippkaea orientalis PCC 8801
cyh Rippkaea orientalis PCC 8802
|
2/59
2/59
|
Gloeothece (2)
|
cyc Gloeothece citriformis
cyj Gloeothece verrucosa
|
2/59
2/59
|
Cyanothece (1)
|
cyn Cyanothece sp. PCC 7425
|
2/59
|
Trichodesmium (1)
|
ter Trichodesmium erythraeum
|
2/59
|
Microcoleus (1)
|
mic Microcoleus sp. PCC 7113
|
2/59
|
Arthrospira (1)
|
arp Arthrospira platensis
|
3/59
|
Planktothrix (1)
|
pagh Planktothrix agardhii
|
5/59
|
Oxynema (1)
|
Limnospira (1)
|
lfs Limnospira fusiformis
|
3/59
|
Geitlerinema (1)
|
Oscillatoria (2)
|
Moorea (1)
|
mpro Moorea producens
|
2/59
|
Crinalium (1)
|
Gloeobacter (2)
|
gvi Gloeobacter violaceus
glj Gloeobacter kilaueensis
|
2/59
2/59
|
Nostoc (8)
|
ana Nostoc sp. PCC 7120
npu Nostoc punctiforme
nos Nostoc sp. PCC 7107
nop Nostoc sp. PCC 7524
non Nostoc sp. NIES-3756
nfl Nostoc flagelliforme
noe Nostoc sp. CENA543
nsh Nostoc sphaeroides
|
2/59
2/59
2/59
2/59
2/59
2/59
2/59
2/59
|
Trichormus (2)
|
ava Trichormus variabilis
|
2/59
|
Anabaena (4)
|
anb Anabaena sp. 90
acy Anabaena cylindrica
awa Anabaena sp. WA102
ann Anabaena sp. YBS01
|
6/59
2/59
6/59
2/59
|
Cylindrospermum (1)
|
csg Cylindrospermum stagnale
|
2/59
|
Calothrix (3)
|
calo Calothrix sp. PCC 7507
calt Calothrix sp. PCC 6303
|
2/59
6/59
|
Rivularia (1)
|
Fischerella (1)
|
fis Fischerella sp. NIES-3754
|
2/59
|
Nodularia (1)
|
Dolichospermum (2)
|
dou Dolichospermum sp. UHCC 0315A
dfs Dolichospermum flos-aquae
|
2/59
6/59
|
Tolypothrix (1)
|
toq Tolypothrix sp. PCC 7910
|
2/59
|
unclassified Nostocales (1)
|
ncn Nostocales cyanobacterium HT-58-2
|
2/59
|
Chroococcidiopsis (1)
|
Pleurocapsa (1)
|
plp Pleurocapsa sp. PCC 7327
|
2/59
|
Stanieria (2)
|
scs Stanieria cyanosphaera
stan Stanieria sp. NIES-3757
|
2/59
6/59
|
unclassified Cyanobacteria (2)
|
ceo Cyanobacterium endosymbiont of Epithemia turgida
cer Cyanobacterium endosymbiont of Rhopalodia gibberula
|
2/59
2/59
|
unclassified Melainabacteria (1)
|
Chloroflexi (31)
|
Dehalococcoides (12)
|
Dehalogenimonas (3)
|
Roseiflexus (2)
|
Chloroflexus (3)
|
Herpetosiphon (1)
|
Thermomicrobium (1)
|
Sphaerobacterineae (1)
|
Anaerolinea (1)
|
Brevefilum (1)
|
Pelolinea (1)
|
unclassified Anaerolineaceae (1)
|
Caldilinea (1)
|
Promineofilum (1)
|
pbf Candidatus Promineofilum breve
|
3/59
|
unclassified Ktedonobacterales (1)
|
kbs Ktedonobacterales bacterium SCAWS-G2
|
2/59
|
Tepidiforma (1)
|
Deinococcus-Thermus (33)
|
Deinococcus (16)
Truepera (1)
Thermus (10)
Meiothermus (4)
Oceanithermus (1)
Marinithermus (1)
|
|
Other Terrabacteria group (3)
|
Chthonomonas (1)
Fimbriimonas (1)
Thermobaculum (1)
|
|
Chlamydiae (120)
|
Chlamydia (114)
|
Protochlamydia (2)
|
pcu Candidatus Protochlamydia amoebophila
pnl Candidatus Protochlamydia naegleriophila
|
3/59
3/59
|
Parachlamydia (1)
|
puv Parachlamydia acanthamoebae
|
12/59
|
Neochlamydia (1)
|
Waddlia (1)
|
wch Waddlia chondrophila
|
3/59
|
Simkania (1)
|
Verrucomicrobia (14)
|
Opitutus (1)
|
Lacunisphaera (1)
|
Nibricoccus (1)
|
unclassified Opitutaceae (1)
|
Coraliomargarita (1)
|
Akkermansia (2)
|
amu Akkermansia muciniphila
agl Akkermansia glycaniphila
|
2/59
2/59
|
Roseimicrobium (1)
|
roo Roseimicrobium sp. ORNL1
|
6/59
|
Luteolibacter (1)
|
luo Luteolibacter sp. G-1-1-1
|
6/59
|
Xiphinematobacter (1)
|
xii Candidatus Xiphinematobacter sp. Idaho Grape
|
2/59
|
Methylacidiphilum (2)
|
unclassified Verrucomicrobia (2)
|
vbs Verrucomicrobia bacterium S94
|
4/59
|
Planctomycetes (31)
|
Rhodopirellula (1)
|
Pirellula (2)
|
Roseimaritima (1)
|
rul Roseimaritima ulvae
|
4/59
|
Mariniblastus (1)
|
Thermogutta (1)
|
Lacipirellula (1)
|
Planctopirus (2)
|
Rubinisphaera (1)
|
Planctomyces (2)
|
pls Planctomyces sp. SH-PL14
|
4/59
|
Fuerstia (1)
|
Gimesia (2)
|
Bremerella (1)
|
Gemmata (3)
|
gog Gemmata obscuriglobus
|
5/59
|
Tuwongella (1)
|
Limnoglobus (1)
|
lrs Limnoglobus roseus
|
4/59
|
Isosphaera (1)
|
Singulisphaera (1)
|
saci Singulisphaera acidiphila
|
4/59
|
Paludisphaera (1)
|
Aquisphaera (1)
|
Kuenenia (1)
|
Phycisphaera (1)
|
Sedimentisphaera (2)
|
Limihaloglobus (1)
|
Anaerohalosphaera (1)
|
Kiritimatiellaeota (1)
|
Kiritimatiella (1)
|
|
Lentisphaerae (1)
|
unclassified Victivallales (1)
|
|
Spirochaetes (86)
|
Borreliella (19)
|
Borrelia (11)
|
Treponema (23)
|
Sediminispirochaeta (1)
|
Spirochaeta (4)
|
Sphaerochaeta (3)
|
Salinispira (1)
|
Oceanispirochaeta (1)
|
Leptospira (13)
|
lbj Leptospira borgpetersenii JB197
lbl Leptospira borgpetersenii L550
lst Leptospira santarosai
laj Leptospira tipperaryensis
lmay Leptospira mayottensis
lkm Leptospira kmetyi
|
5/59
5/59
4/59
4/59
5/59
4/59
|
Turneriella (1)
|
tpx Turneriella parva
|
4/59
|
Brachyspira (9)
|
bhy Brachyspira hyodysenteriae WA1
bhd Brachyspira hyodysenteriae ATCC 27164
brm Brachyspira murdochii
bpo Brachyspira pilosicoli 95/1000
bpj Brachyspira pilosicoli B2904
bpip Brachyspira pilosicoli P43/6/78
bpw Brachyspira pilosicoli WesB
bip Brachyspira intermedia
bhp Brachyspira hampsonii
|
2/59
2/59
2/59
2/59
2/59
2/59
2/59
2/59
2/59
|
Acidobacteria (13)
|
Koribacter (1)
|
Acidobacterium (1)
|
Granulicella (3)
|
gma Granulicella mallensis
|
6/59
|
Terriglobus (3)
|
Acidisarcina (1)
|
abas Acidisarcina polymorpha
|
2/59
|
Edaphobacter (1)
|
Solibacter (1)
|
sus Candidatus Solibacter usitatus
|
2/59
|
Chloracidobacterium (1)
|
Luteitalea (1)
|
Elusimicrobia (4)
|
Elusimicrobium (1)
|
emi Elusimicrobium minutum
|
2/59
|
Endomicrobium (3)
|
Fusobacteria (24)
|
Fusobacterium (13)
Ilyobacter (1)
Leptotrichia (7)
Sebaldella (1)
Streptobacillus (1)
Sneathia (1)
|
|
Synergistetes (6)
|
Thermanaerovibrio (1)
Aminobacterium (1)
Thermovirga (1)
Anaerobaculum (1)
Fretibacterium (1)
Cloacibacillus (1)
|
|
Fibrobacteres (2)
|
Fibrobacter (2)
|
fsu Fibrobacter succinogenes
fsc Fibrobacter succinogenes
|
2/59
2/59
|
Gemmatimonadetes (3)
|
Gemmatimonas (2)
|
gau Gemmatimonas aurantiaca
gph Gemmatimonas phototrophica
|
2/59
2/59
|
Gemmatirosa (1)
|
gba Gemmatirosa kalamazoonesis
|
2/59
|
Bacteroidetes (360)
|
Bacteroides (20)
|
Porphyromonas (6)
|
Fermentimonas (1)
|
Petrimonas (2)
|
Paludibacter (1)
|
Parabacteroides (2)
|
Tannerella (2)
|
Muribaculum (1)
|
Duncaniella (1)
|
Barnesiella (1)
|
Proteiniphilum (1)
|
Dysgonomonas (1)
|
Odoribacter (1)
|
Butyricimonas (1)
|
Azobacteroides (1)
|
Prevotella (10)
|
Alloprevotella (1)
|
Alistipes (6)
|
Mucinivorans (1)
|
unclassified Bacteroidales (1)
|
Draconibacterium (2)
|
Salinivirga (1)
|
Alkalitalea (1)
|
Labilibaculum (1)
|
Salinibacter (2)
|
Rhodothermus (2)
|
unclassified Rhodothermaceae (1)
|
Chitinophaga (4)
|
cpi Chitinophaga pinensis
cbae Chitinophaga caeni
chit Chitinophaga sp. XS-30
|
4/59
4/59
4/59
|
Niastella (1)
|
Niabella (2)
|
Flavisolibacter (2)
|
fla Flavisolibacter tropicus
fgg Flavisolibacter ginsenosidimutans
|
4/59
4/59
|
Arachidicoccus (4)
|
Filimonas (1)
|
fln Filimonas lacunae
|
4/59
|
Pseudoflavitalea (1)
|
pseg Paraflavitalea soli
|
4/59
|
Panacibacter (1)
|
pgin Panacibacter ginsenosidivorans
|
4/59
|
Pseudobacter (1)
|
pgo Pseudobacter ginsenosidimutans
|
4/59
|
Flavihumibacter (1)
|
Haliscomenobacter (1)
|
hhy Haliscomenobacter hydrossis
|
4/59
|
Saprospira (1)
|
Pedobacter (7)
|
pep Pedobacter sp. PACM 27299
psty Pedobacter steynii
pek Pedobacter sp. KBS0701
|
4/59
4/59
4/59
|
Pseudopedobacter (1)
|
Sphingobacterium (9)
|
Solitalea (1)
|
Mucilaginibacter (8)
|
mup Mucilaginibacter sp. PAMC 26640
muc Mucilaginibacter xinganensis
mgot Mucilaginibacter gotjawali
muh Mucilaginibacter sp. HYN0043
mgin Mucilaginibacter ginsenosidivorans
mgk Mucilaginibacter ginsenosidivorax
mrub Mucilaginibacter rubeus
mgos Mucilaginibacter gossypii
|
4/59
4/59
4/59
4/59
4/59
4/59
4/59
4/59
|
Anseongella (1)
|
Olivibacter (1)
|
unclassified Sphingobacteriaceae (1)
|
Cyclobacterium (2)
|
cmr Cyclobacterium marinum
camu Cyclobacterium amurskyense
|
4/59
4/59
|
Belliella (1)
|
Echinicola (3)
|
Algoriphagus (1)
|
Cytophaga (1)
|
Dyadobacter (1)
|
Spirosoma (6)
|
sli Spirosoma linguale
srd Spirosoma radiotolerans
spir Spirosoma pollinicola
spik Spirosoma sp. KCTC 42546
spib Spirosoma sp. BT328
|
4/59
4/59
4/59
4/59
4/59
|
Leadbetterella (1)
|
Runella (3)
|
rsi Runella slithyformis
run Runella sp. HYN0085
rup Runella sp. SP2
|
4/59
4/59
4/59
|
Emticicia (1)
|
Fibrella (2)
|
fae Fibrella aestuarina
fib Fibrella sp. ES10-3-2-2
|
4/59
4/59
|
Allopseudarcicella (1)
|
psez Allopseudarcicella aquatilis
|
4/59
|
Arcticibacterium (1)
|
Rhodocytophaga (1)
|
rhoz Rhodocytophaga sp. 172606-1
|
4/59
|
Flexibacter (1)
|
Hymenobacter (10)
|
hyj Hymenobacter jejuensis
|
4/59
|
Pontibacter (2)
|
pact Pontibacter actiniarum
|
4/59
|
Rufibacter (3)
|
ruf Rufibacter sp. DG31D
|
4/59
|
Nibribacter (1)
|
nib Nibribacter sp. BT10
|
4/59
|
Marivirga (1)
|
mtt Marivirga tractuosa
|
4/59
|
Flammeovirga (2)
|
Fabibacter (1)
|
unclassified Flammeovirgaceae (1)
|
Amoebophilus (1)
|
Cardinium (3)
|
Chryseolinea (1)
|
chk Chryseolinea soli
|
4/59
|
Gramella (4)
|
Flavobacterium (25)
|
fpsz Flavobacterium psychrophilum Z2
|
4/59
|
Capnocytophaga (13)
|
Robiginitalea (1)
|
Zunongwangia (1)
|
Croceibacter (1)
|
Riemerella (6)
|
Maribacter (5)
|
Cellulophaga (5)
|
Weeksella (1)
|
Dokdonia (4)
|
Lacinutrix (3)
|
Zobellia (1)
|
zga Zobellia galactanivorans
|
4/59
|
Muricauda (3)
|
Aequorivita (2)
|
aev Aequorivita sp. H23M31
|
2/59
|
Ornithobacterium (2)
|
Psychroflexus (1)
|
Nonlabens (5)
|
Polaribacter (5)
|
poa Polaribacter sp. ALD11
|
4/59
|
Elizabethkingia (9)
|
emn Elizabethkingia anophelis FMS-007
een Elizabethkingia anophelis JM-87
emg Elizabethkingia meningoseptica
|
4/59
4/59
4/59
|
Myroides (4)
|
mod Myroides odoratimimus
myz Myroides sp. ZB35
|
4/59
4/59
|
Chryseobacterium (15)
|
cio Chryseobacterium indologenes
chry Chryseobacterium sp. T16E-39
cpip Chryseobacterium piperi
chrs Chryseobacterium sp. 3008163
clac Chryseobacterium lactis
|
4/59
4/59
4/59
4/59
4/59
|
Winogradskyella (2)
|
Siansivirga (1)
|
Algibacter (1)
|
Sediminicola (1)
|
Tenacibaculum (5)
|
Lutibacter (1)
|
Urechidicola (1)
|
Wenyingzhuangia (1)
|
Formosa (3)
|
Salegentibacter (1)
|
salt Salegentibacter sp. T436
|
4/59
|
Seonamhaeicola (1)
|
Arenibacter (1)
|
Olleya (2)
|
Flavivirga (1)
|
Tamlana (1)
|
Aureitalea (1)
|
Spongiibacterium (1)
|
Kordia (2)
|
Mariniflexile (1)
|
Aquimarina (3)
|
aqa Aquimarina sp. AD1
|
4/59
|
Euzebyella (1)
|
Cloacibacterium (1)
|
Muriicola (1)
|
mur Muriicola sp. MMS17-SY002
|
4/59
|
Psychroserpens (1)
|
Antarcticibacterium (2)
|
afla Antarcticibacterium flavum
anp Antarcticibacterium sp. PAMC 28998
|
4/59
4/59
|
Empedobacter (1)
|
Oceanihabitans (1)
|
Bergeyella (1)
|
Marinirhabdus (1)
|
Apibacter (1)
|
Mesoflavibacter (1)
|
Galbibacter (1)
|
unclassified Flavobacteriaceae (3)
|
Sulcia (9)
|
Blattabacterium (9)
|
Fluviicola (2)
|
fte Fluviicola taffensis
|
7/59
|
Owenweeksia (1)
|
Ichthyobacterium (1)
|
Walczuchella (1)
|
Uzinura (1)
|
unclassified Bacteroidetes (1)
|
Chlorobi (17)
|
Chlorobaculum (3)
Chlorobium (5)
Pelodictyon (2)
Prosthecochloris (4)
Chloroherpeton (1)
Ignavibacterium (1)
Melioribacter (1)
|
|
Balneolaeota (1)
|
Cyclonatronum (1)
|
|
Cloacimonetes (1)
|
Cloacimonas (1)
|
|
Aquificae (14)
|
Aquifex (1)
Hydrogenobaculum (3)
Hydrogenobacter (2)
Thermocrinis (2)
Sulfurihydrogenibium (2)
Persephonella (1)
Thermosulfidibacter (1)
Thermovibrio (1)
Desulfurobacterium (1)
|
|
Thermotogae (32)
|
Thermotoga (13)
Pseudothermotoga (3)
Thermosipho (4)
Fervidobacterium (3)
Petrotoga (1)
Marinitoga (2)
Defluviitoga (1)
Kosmotoga (2)
Mesotoga (2)
Athalassotoga (1)
|
|
Coprothermobacterota (1)
|
Coprothermobacter (1)
|
|
Caldiserica (1)
|
Caldisericum (1)
|
|
Chrysiogenetes (1)
|
Desulfurispirillum (1)
|
|
Deferribacteres (5)
|
Deferribacter (1)
Denitrovibrio (1)
Calditerrivibrio (1)
Flexistipes (1)
Geovibrio (1)
|
|
Calditrichaeota (1)
|
Caldithrix (1)
|
caby Caldithrix abyssi
|
2/59
|
Dictyoglomi (2)
|
Dictyoglomus (2)
|
|
Nitrospirae (9)
|
Thermodesulfovibrio (1)
|
Nitrospira (4)
|
nde Nitrospira defluvii
nmv Nitrospira moscoviensis
nio Candidatus Nitrospira inopinata
nja Nitrospira japonica
|
2/59
2/59
2/59
2/59
|
Leptospirillum (4)
|
Thermodesulfobacteria (7)
|
Thermodesulfatator (1)
Thermodesulfobacterium (3)
Caldimicrobium (1)
Thermosulfuriphilus (1)
Thermosulfurimonas (1)
|
|
Saccharibacteria (4)
|
Saccharimonas (4)
|
|
Peregrinibacteria (1)
|
Peribacter (1)
|
|
Bipolaricaulota (2)
|
Bipolaricaulis (2)
|
|
Other (4)
|
Vampirococcus (1)
|
Methylomirabilis (1)
|
mox Candidatus Methylomirabilis oxyfera
|
2/59
|
Chazhemtobacterium (1)
|
Babela (1)
|
unclassified Bacteria (11)
|
|
|
Archaea (326)
|
Euryarchaeota (226)
|
Methanocaldococcus (6)
|
Methanotorris (1)
|
Methanococcus (11)
|
Methanothermococcus (1)
|
Methanofervidicoccus (1)
|
Methanothermobacter (8)
|
Methanosphaera (2)
|
Methanobrevibacter (6)
|
Methanobacterium (10)
|
Methanothermus (1)
|
Methanopyrus (1)
|
Archaeoglobus (5)
|
Ferroglobus (1)
|
Geoglobus (2)
|
Thermoplasma (2)
|
Picrophilus (1)
|
Ferroplasma (2)
|
Cuniculiplasma (1)
|
unclassified Thermoplasmatales (1)
|
Methanomethylophilus (1)
|
Methanomassiliicoccus (1)
|
Methanoplasma (1)
|
unclassified Thermoplasmata (1)
|
Aciduliprofundum (2)
|
Pyrococcus (8)
|
Thermococcus (27)
|
Palaeococcus (1)
|
Methanosarcina (23)
|
Methanococcoides (2)
|
Methanohalophilus (2)
|
Methanohalobium (1)
|
Methanosalsum (1)
|
Methanolobus (2)
|
Methanomethylovorans (1)
|
Methanosaeta (3)
|
Methanospirillum (1)
|
Methanocorpusculum (1)
|
Methanoculleus (3)
|
Methanolacinia (1)
|
Methanoregula (2)
|
Methanosphaerula (1)
|
Methanocella (3)
|
Halobacterium (4)
|
hal Halobacterium salinarum NRC-1
hsl Halobacterium salinarum
hdl Halobacterium sp. DL1
hhb Halobacterium hubeiense
|
2/59
2/59
2/59
2/59
|
Halalkalicoccus (1)
|
hje Halalkalicoccus jeotgali
|
2/59
|
Halodesulfurarchaeum (2)
|
Halanaeroarchaeum (2)
|
hsu Halanaeroarchaeum sulfurireducens HSR2
hsf Halanaeroarchaeum sulfurireducens M27-SA2
|
2/59
2/59
|
Salarchaeum (1)
|
salr Salarchaeum sp. JOR-1
|
2/59
|
Halarchaeum (1)
|
Haloarcula (6)
|
hma Haloarcula marismortui
hhi Haloarcula hispanica ATCC 33960
hhn Haloarcula hispanica N601
hab Haloarcula sp. CBA1115
hta Haloarcula taiwanensis
halj Haloarcula sp. JP-L23
|
2/59
2/59
2/59
2/59
2/59
2/59
|
Natronomonas (2)
|
nmo Natronomonas moolapensis
|
2/59
|
Halorhabdus (3)
|
hut Halorhabdus utahensis
hti Halorhabdus tiamatea
hala Halorhabdus sp. CBA1104
|
2/59
2/59
2/59
|
Halomicrobium (3)
|
hmu Halomicrobium mukohataei
halz Halomicrobium mukohataei JP60
hall Halomicrobium sp. LC1Hm
|
2/59
2/59
2/59
|
Halorientalis (1)
|
Halapricum (1)
|
hsn Halapricum salinum
|
2/59
|
unclassified Haloarculaceae (1)
|
harc Haloarculaceae archaeon HArcel1
|
2/59
|
Haloquadratum (2)
|
hwa Haloquadratum walsbyi DSM 16790
hwc Haloquadratum walsbyi C23
|
2/59
2/59
|
Haloferax (4)
|
hvo Haloferax volcanii
hme Haloferax mediterranei
hgi Haloferax gibbonsii
hale Haloferax alexandrinus
|
2/59
2/59
2/59
2/59
|
Halogeometricum (1)
|
hbo Halogeometricum borinquense
|
2/59
|
Haloplanus (4)
|
haq Haloplanus sp. CBA1112
haj Haloplanus sp. CBA1113
haer Haloplanus aerogenes
hra Haloplanus rallus
|
2/59
2/59
2/59
2/59
|
Halobellus (1)
|
hlm Halobellus limi
|
2/59
|
Haloprofundus (1)
|
halm Haloprofundus sp. MHR1
|
2/59
|
Halorubrum (5)
|
hla Halorubrum lacusprofundi
halp Halorubrum sp. PV6
halb Halorubrum sp. BOL3-1
hezz Halorubrum ezzemoulense
|
2/59
2/59
2/59
2/59
|
Salinigranum (1)
|
srub Salinigranum rubrum
|
2/59
|
Halohasta (1)
|
hae Halohasta litchfieldiae
|
2/59
|
Halolamina (1)
|
Halobonum (1)
|
Halalkaliarchaeum (1)
|
hdf Halalkaliarchaeum desulfuricum
|
2/59
|
unclassified Haloferacales (1)
|
hah Halophilic archaeon DL31
|
2/59
|
Haloterrigena (3)
|
htu Haloterrigena turkmenica
hda Haloterrigena daqingensis
hjt Haloterrigena jeotgali
|
2/59
2/59
2/59
|
Natrialba (1)
|
nmg Natrialba magadii
|
2/59
|
Halopiger (1)
|
hxa Halopiger xanaduensis
|
2/59
|
Natrinema (4)
|
nat Natrinema sp. J7-2
npe Natrinema pellirubrum
nvr Natrinema versiforme
npl Natrinema pallidum
|
2/59
2/59
2/59
2/59
|
Natronobacterium (1)
|
nge Natronobacterium gregoryi
|
2/59
|
Halovivax (1)
|
hru Halovivax ruber
|
2/59
|
Natronococcus (1)
|
nou Natronococcus occultus
|
2/59
|
Salinarchaeum (1)
|
sali Salinarchaeum sp. Harcht-Bsk1
|
2/59
|
Halostagnicola (1)
|
hlr Halostagnicola larsenii
|
2/59
|
Halobiforma (1)
|
hlc Halobiforma lacisalsi
|
2/59
|
Natronolimnobius (3)
|
naj Natronolimnobius aegyptiacus
nag Natronolimnobius sulfurireducens AArc-Mg
nan Natronolimnobius sulfurireducens AArc1
|
2/59
2/59
2/59
|
Natronorubrum (2)
|
nbg Natronorubrum bangense
nas Natronorubrum aibiense
|
2/59
2/59
|
Natrialbaceae (1)
|
nax Natrialbaceae archaeon XQ-INN 246
|
2/59
|
unclassified Nanohaloarchaea (1)
|
nac Nanohaloarchaea archaeon SG9
|
2/59
|
Crenarchaeota (71)
|
Aeropyrum (2)
Staphylothermus (2)
Ignicoccus (2)
Desulfurococcus (3)
Thermosphaera (1)
Ignisphaera (1)
Thermogladius (1)
Hyperthermus (1)
Pyrolobus (1)
Pyrodictium (1)
Sulfurisphaera (2)
Saccharolobus (5)
Sulfolobus (15)
Metallosphaera (5)
Acidianus (5)
Sulfodiicoccus (1)
Stygiolobus (1)
Sulfuracidifex (1)
Pyrobaculum (8)
Caldivirga (1)
Thermoproteus (2)
Vulcanisaeta (2)
Thermofilum (4)
Acidilobus (2)
Caldisphaera (1)
Fervidicoccus (1)
|
|
Thaumarchaeota (18)
|
Nitrosopumilus (6)
Nitrosomarinus (1)
Cenarchaeum (1)
Nitrososphaera (3)
Nitrosocosmicus (2)
Nitrosocaldus (1)
Caldiarchaeum (1)
Nitrosopelagicus (1)
Nitrosotenuis (1)
Nitrosotalea (1)
|
|
Korarchaeota (1)
|
Korarchaeum (1)
|
|
Bathyarchaeota (2)
|
unclassified Bathyarchaeota (2)
|
|
Geothermarchaeota (1)
|
Conexivisphaera (1)
|
|
Nanoarchaeota (2)
|
Nanoarchaeum (1)
Nanopusillus (1)
|
|
Micrarchaeota (1)
|
Candidatus Mancarchaeum (1)
|
|
Lokiarchaeota (2)
|
Lokiarchaeum (1)
Prometheoarchaeum (1)
|
|
unclassified Archaea (2)
|
KEGG Organisms