Eukaryotes (541)
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Animals (250)
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Vertebrates (146)
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Mammals (66)
Birds (24)
Reptiles (12)
Amphibians (3)
Fishes (39)
Cartilaginous fishes (2)
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Lancelets (1)
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Ascidians (1)
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Echinoderms (2)
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Hemichordates (1)
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Arthropods (72)
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Insects (65)
Crustaceans (2)
Chelicerates (5)
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Nematodes (6)
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Annelids (1)
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Mollusks (5)
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Brachiopodas (1)
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Flatworms (4)
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Cnidarians (8)
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Placozoans (1)
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Poriferans (1)
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Plants (106)
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Eudicots (75)
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Mustard family (9)
Caper family (1)
Papaya family (1)
Rue family (2)
Mallow family (5)
Myrtle family (1)
Pea family (13)
Rose family (7)
Buckthorn family (1)
Cucumber family (6)
Spurge family (4)
Willow family (2)
Walnut family (1)
Beech family (1)
Grape family (1)
Nightshade family (8)
Morning-glory family (1)
Sesame family (1)
Olive family (1)
Daisy family (3)
Parsley family (1)
Amaranth family (3)
Lotus family (1)
Poppy family (1)
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Monocots (14)
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Grass family (8)
Palm family (2)
Banana family (1)
Orchid family (2)
Asparagus family (1)
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Basal Magnoliophyta (1)
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Amborella family (1)
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Ferns (1)
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Mosses (1)
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Green algae (11)
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Red algae (3)
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Fungi (133)
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Ascomycetes (95)
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Saccharomycetes (32)
Sordariomycetes (27)
Leotiomycetes (5)
Eurotiomycetes (19)
Dothideomycetes (10)
Pezizomycetes (1)
Schizosaccharomycetes (1)
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Basidiomycetes (33)
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Microsporidians (5)
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Protists (52)
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Choanoflagellates (2)
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Amoebozoa (7)
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Dictyostelia (3)
Entamoeba (3)
Acanthamoeba (1)
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Alveolates (21)
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Apicomplexans (18)
Ciliates (2)
Dinoflagellates (1)
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Stramenopiles (8)
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Diatoms (3)
Eustigmatophytes (1)
Pelagophytes (1)
Oomycetes (3)
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Haptophyta (1)
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Cryptomonads (1)
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Euglenozoa (9)
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Kinetoplasts (9)
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Heterolobosea (1)
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Tetramitia (1)
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Metamonada (2)
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Trichomonads (1)
Diplomonads (1)
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Prokaryotes (6109)
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Bacteria (5783)
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Gammaproteobacteria - Enterobacteria (511)
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Escherichia (69)
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eco Escherichia coli K-12 MG1655
ecj Escherichia coli K-12 W3110
ebw Escherichia coli K-12 BW2952
ecok Escherichia coli K-12 MDS42
ece Escherichia coli O157:H7 EDL933 (EHEC)
ecs Escherichia coli O157:H7 Sakai (EHEC)
ecf Escherichia coli O157:H7 EC4115 (EHEC)
etw Escherichia coli O157:H7 TW14359 (EHEC)
elx Escherichia coli O157:H7 Xuzhou21 (EHEC)
eoi Escherichia coli O111:H- 11128 (EHEC)
eoj Escherichia coli O26:H11 11368 (EHEC)
eoh Escherichia coli O103:H2 12009 (EHEC)
ecoo Escherichia coli O145:H28 RM13514 (EHEC)
ecoh Escherichia coli O145:H28 RM13516 (EHEC)
esl Escherichia coli O104:H4 2011C-3493 (EAEC)
eso Escherichia coli O104:H4 2009EL-2071 (EAEC)
esm Escherichia coli O104:H4 2009EL-2050 (EAEC)
eck Escherichia coli 55989 (EAEC)
eok Escherichia coli O55:H7 CB9615 (EPEC)
elr Escherichia coli O55:H7 RM12579 (EPEC)
elh Escherichia coli O78:H11:K80 H10407 (ETEC)
ecw Escherichia coli O139:H28 E24377A (ETEC)
eun Escherichia coli UMNK88 (ETEC, porcine)
ena Escherichia coli NA114 (UPEC)
ecos Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
ecoa Escherichia coli APEC O78 (APEC)
ecx Escherichia coli O9 HS (commensal)
ecm Escherichia coli SMS-3-5 (environmental)
ecy Escherichia coli O152:H28 SE11 (commensal)
ecr Escherichia coli O8 IAI1 (commensal)
ecq Escherichia coli O81 ED1a (commensal)
eum Escherichia coli O17:K52:H18 UMN026 (ExPEC)
ect Escherichia coli O7:K1 IAI39 (ExPEC)
eoc Escherichia coli O7:K1 CE10
ebr Escherichia coli B REL606
ebl Escherichia coli BL21(DE3)
ebe Escherichia coli BL21(DE3)
ebd Escherichia coli BL21-Gold(DE3)pLysS AG
elo Escherichia coli O44:H18 042 (EAEC)
ese Escherichia coli O150:H5 SE15 (commensal)
ecl Escherichia coli ATCC 8739
eko Escherichia coli KO11FL
ekf Escherichia coli KO11FL
edh Escherichia coli DH1
edj Escherichia coli DH1
elw Escherichia coli W
ell Escherichia coli W
elp Escherichia coli P12b
ecol Escherichia coli LY180
ecoj Escherichia coli JJ1886
efe Escherichia fergusonii
ema Escherichia marmotae
esz Escherichia sp. E4742
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Salmonella (54)
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Shigella (13)
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ssn Shigella sonnei Ss046
shq Shigella sp. PAMC 28760
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Enterobacter (31)
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eas Enterobacter soli
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2/37
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Cronobacter (11)
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Klebsiella (42)
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kpn Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
kpu Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
kpm Klebsiella pneumoniae subsp. pneumoniae HS11286
kpp Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1)
kph Klebsiella pneumoniae subsp. pneumoniae KPNIH24
kpz Klebsiella pneumoniae subsp. pneumoniae KPNIH27
kpv Klebsiella pneumoniae subsp. pneumoniae KPNIH29
kpw Klebsiella pneumoniae subsp. pneumoniae KPNIH30
kpy Klebsiella pneumoniae subsp. pneumoniae KPNIH31
kpg Klebsiella pneumoniae subsp. pneumoniae KPNIH32
kpc Klebsiella pneumoniae subsp. pneumoniae KPNIH10
kpq Klebsiella pneumoniae subsp. pneumoniae KPR0928
kpt Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
kpo Klebsiella pneumoniae KCTC 2242
kpr Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
kpj Klebsiella pneumoniae JM45
kpi Klebsiella pneumoniae CG43
kpa Klebsiella pneumoniae 30660/NJST258_1
kps Klebsiella pneumoniae 30684/NJST258_2
kpx Klebsiella pneumoniae PMK1
kpb Klebsiella pneumoniae blaNDM-1
kpne Klebsiella pneumoniae 32192
kpnu Klebsiella pneumoniae 34618
kpnk Klebsiella pneumoniae Kp52.145
kva Klebsiella variicola At-22
kpe Klebsiella variicola 342
kpk Klebsiella variicola KP5-1
kvd Klebsiella variicola DX120E
kvq Klebsiella variicola DSM 15968
kox Klebsiella michiganensis KCTC 1686
koe Klebsiella michiganensis E718
koy Klebsiella michiganensis HKOPL1
kom Klebsiella michiganensis M1
kmi Klebsiella michiganensis RC10
kok Klebsiella oxytoca KONIH1
koc Klebsiella oxytoca CAV1374
kqu Klebsiella quasipneumoniae
eae Klebsiella aerogenes KCTC 2190
ear Klebsiella aerogenes EA1509E
kqv Klebsiella quasivariicola
kll Klebsiella sp. LTGPAF-6F
klw Klebsiella huaxiensis
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Citrobacter (15)
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cfd Citrobacter freundii
cwe Citrobacter werkmanii
cyo Citrobacter youngae
cpot Citrobacter portucalensis
cfq Citrobacter freundii complex sp. CFNIH3
caf Citrobacter amalonaticus FDAARGOS_165
cif Citrobacter sp. FDAARGOS_156
cfar Citrobacter farmeri
cir Citrobacter sp. CFNIH10
cie Citrobacter sp. CRE-46
cpar Citrobacter pasteurii
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Gibbsiella (1)
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gqu Gibbsiella quercinecans
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Blochmannia (6)
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Hamiltonella (1)
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unclassified aphid symbionts (2)
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unclassified mealybug symbionts (1)
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Riesia (2)
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Moranella (2)
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Shimwellia (1)
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ebt Shimwellia blattae
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10/37
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Raoultella (6)
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ror Raoultella ornithinolytica B6
ron Raoultella ornithinolytica S12
rpln Raoultella planticola
rao Raoultella sp. X13
rtg Raoultella terrigena
ree Raoultella electrica
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Cedecea (4)
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Pluralibacter (3)
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pge Pluralibacter gergoviae
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18/37
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Kosakonia (5)
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Kluyvera (2)
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kgo Kluyvera georgiana
kie Kluyvera intermedia
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Ishikawaella (1)
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Leclercia (6)
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lax Leclercia adecarboxylata
lei Leclercia sp. LSNIH1
leh Leclercia sp. LSNIH3
lee Leclercia sp. W17
ler Leclercia sp. 1106151
lea Leclercia sp. J807
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Lelliottia (4)
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lef Lelliottia jeotgali
lew Lelliottia sp. WB101
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Limnobaculum (1)
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Buttiauxella (2)
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buf Buttiauxella sp. 3AFRM03
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Tachikawaea (1)
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Doolittlea (1)
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Hoaglandella (1)
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Gullanella (1)
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Mikella (1)
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Purcelliella (1)
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Metakosakonia (1)
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mety Metakosakonia sp. MRY16-398
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Atlantibacter (1)
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Izhakiella (1)
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izh Izhakiella sp. KSNA2
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Yokenella (1)
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Scandinavium (1)
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sgoe Scandinavium goeteborgense
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unclassified Enterobacteriaceae (4)
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ebf Enterobacteriaceae bacterium FGI 57
ebc Enterobacteriaceae bacterium ENNIH2
ebu Enterobacteriaceae bacterium S05
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Yersinia (46)
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yca Yersinia canariae
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Serratia (24)
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smar Serratia marcescens SM39
smac Serratia marcescens subsp. marcescens Db11
smw Serratia marcescens WW4
spe Serratia proteamaculans
srr Serratia plymuthica AS9
srl Serratia plymuthica 4Rx13
sry Serratia plymuthica S13
sply Serratia plymuthica PRI-2C
srs Serratia sp. AS12
sra Serratia sp. AS13
smaf Serratia sp. FGI94
slq Serratia liquefaciens
serf Serratia sp. FS14
sfw Serratia fonticola DSM 4576
sfg Serratia fonticola GS2
srz Serratia rubidaea
sera Serratia sp. ATCC 39006
serq Serratia sp. ATCC 39006
serm Serratia sp. MYb239
squ Serratia quinivorans
sfj Serratia ficaria
sof Serratia odorifera
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Chania (1)
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Rahnella (4)
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raq Rahnella aquatilis CIP 78.65 = ATCC 33071
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Fukatsuia (1)
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Pectobacterium (13)
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eca Pectobacterium atrosepticum SCRI1043
patr Pectobacterium atrosepticum JG10-08
pato Pectobacterium atrosepticum 21A
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Sodalis (4)
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Dickeya (11)
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dzc Dickeya zeae EC1
daq Dickeya aquatica
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Brenneria (3)
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Lonsdalea (1)
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Erwinia (11)
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epe Erwinia persicina
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Buchnera (18)
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Wigglesworthia (2)
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Pantoea (17)
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pao Pantoea sp. At-9b
kln Pantoea rwandensis
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Mixta (4)
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Tatumella (2)
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Photorhabdus (4)
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plu Photorhabdus laumondii subsp. laumondii TTO1
plum Photorhabdus laumondii subsp. laumondii DSPV002N
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Proteus (8)
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Xenorhabdus (7)
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xbv Xenorhabdus bovienii CS03
xne Xenorhabdus nematophila ATCC 19061
xnm Xenorhabdus nematophila AN6/1
xho Xenorhabdus hominickii
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Providencia (9)
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Morganella (1)
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Arsenophonus (3)
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Edwardsiella (8)
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Hafnia (2)
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Obesumbacterium (1)
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Pragia (2)
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Leminorella (1)
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lri Leminorella richardii
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4/37
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Phytobacter (2)
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kin Phytobacter ursingii
pdz Phytobacter diazotrophicus
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Plesiomonas (1)
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Gammaproteobacteria - Others (842)
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Haemophilus (22)
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Glaesserella (5)
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Histophilus (2)
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Pasteurella (7)
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Basfia (2)
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Mannheimia (15)
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Actinobacillus (11)
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Aggregatibacter (9)
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Gallibacterium (1)
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Bibersteinia (4)
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Avibacterium (2)
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Rodentibacter (2)
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Otariodibacter (1)
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Frederiksenia (1)
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Bisgaardia (1)
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unclassified Pasteurellaceae (1)
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paet Pasteurella aerogenes
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Xylella (9)
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Xanthomonas (38)
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xcc Xanthomonas campestris pv. campestris ATCC 33913
xcb Xanthomonas campestris pv. campestris 8004
xca Xanthomonas campestris pv. campestris B100
xcp Xanthomonas campestris pv. raphani
xcv Xanthomonas campestris pv. vesicatoria
xax Xanthomonas axonopodis pv. citrumelo F1
xac Xanthomonas citri pv. citri 306
xci Xanthomonas citri subsp. citri Aw12879
xct Xanthomonas citri subsp. citri A306
xcj Xanthomonas citri subsp. citri UI6
xcu Xanthomonas citri pv. citri UI7
xcn Xanthomonas citri pv. citri NT17
xcw Xanthomonas citri pv. citri MN10
xcr Xanthomonas citri pv. citri MN11
xcm Xanthomonas citri pv. citri MN12
xcf Xanthomonas citri pv. citri mf20
xao Xanthomonas axonopodis Xac29-1
xor Xanthomonas oryzae pv. oryzicola BLS256
xoz Xanthomonas oryzae pv. oryzicola CFBP7342
xal Xanthomonas albilineans
xsa Xanthomonas sacchari
xve Xanthomonas vesicatoria
xpe Xanthomonas perforans
xhr Xanthomonas hortorum
xga Xanthomonas hortorum pv. gardneri
xva Xanthomonas vasicola
xan Xanthomonas sp. ISO98C4
xar Xanthomonas arboricola
xcz Xanthomonas cucurbitae
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Stenotrophomonas (11)
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smt Stenotrophomonas maltophilia R551-3
stek Stenotrophomonas sp. KCTC 12332
slm Stenotrophomonas sp. LM091
stem Stenotrophomonas sp. MYb57
stes Stenotrophomonas sp. ASS1
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Pseudoxanthomonas (3)
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psd Pseudoxanthomonas spadix
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Lysobacter (11)
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lab Lysobacter antibioticus 76
laq Lysobacter antibioticus ATCC 29479
lcp Lysobacter capsici
lgu Lysobacter gummosus
lez Lysobacter enzymogenes C3
lem Lysobacter enzymogenes M497-1
lyj Lysobacter sp. SJ-36
lsol Lysobacter soli
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Luteimonas (3)
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lum Luteimonas chenhongjianii
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Thermomonas (2)
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theh Thermomonas sp. HDW16
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2/37
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Pseudolysobacter (1)
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xbc Pseudolysobacter antarcticus
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2/37
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Frateuria (1)
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Rhodanobacter (2)
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rgl Rhodanobacter glycinis
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7/37
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Dyella (4)
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dji Dyella jiangningensis
dja Dyella japonica
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Dokdonella (1)
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Luteibacter (2)
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lrz Luteibacter rhizovicinus DSM 16549
lpy Luteibacter pinisoli
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Ahniella (1)
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xba Ahniella affigens
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2/37
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Aerosticca (1)
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rbd Aerosticca soli
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16/37
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Vibrio (53)
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vna Vibrio natriegens
vej Vibrio sp. EJY3
vfu Vibrio furnissii
vaf Vibrio alfacsensis
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Aliivibrio (4)
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Photobacterium (3)
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Grimontia (1)
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Paraphotobacterium (1)
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Salinivibrio (3)
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Pseudomonas (115)
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pae Pseudomonas aeruginosa PAO1
paev Pseudomonas aeruginosa PAO1-VE13
paei Pseudomonas aeruginosa PAO1-VE2
pau Pseudomonas aeruginosa UCBPP-PA14
pap Pseudomonas aeruginosa PA7
pag Pseudomonas aeruginosa LESB58
paf Pseudomonas aeruginosa M18
pnc Pseudomonas aeruginosa NCGM2.S1
paeb Pseudomonas aeruginosa NCGM 1900
pdk Pseudomonas aeruginosa DK2
psg Pseudomonas aeruginosa B136-33
prp Pseudomonas aeruginosa RP73
paep Pseudomonas aeruginosa PA1
paer Pseudomonas aeruginosa PA1R
paem Pseudomonas aeruginosa MTB-1
pael Pseudomonas aeruginosa LES431
paes Pseudomonas aeruginosa SCV20265
paeu Pseudomonas aeruginosa PA38182
paeg Pseudomonas aeruginosa YL84
paec Pseudomonas aeruginosa c7447m
paeo Pseudomonas aeruginosa PAO581
pmk Pseudomonas mendocina NK-01
pre Pseudomonas resinovorans
ppse Pseudomonas pseudoalcaligenes
pcq Pseudomonas citronellolis
ppu Pseudomonas putida KT2440
ppf Pseudomonas putida F1
ppg Pseudomonas putida GB-1
ppw Pseudomonas putida W619
ppt Pseudomonas putida S16
ppb Pseudomonas putida BIRD-1
ppi Pseudomonas putida ND6
ppx Pseudomonas putida DOT-T1E
ppuh Pseudomonas putida HB3267
pput Pseudomonas putida H8234
ppun Pseudomonas putida NBRC 14164
ppud Pseudomonas putida DLL-E4
pfv Pseudomonas fulva
pmon Pseudomonas monteilii SB3078
pmot Pseudomonas monteilii SB3101
pmos Pseudomonas soli
ppj Pseudomonas plecoglossicida
pst Pseudomonas syringae pv. tomato DC3000
psb Pseudomonas syringae pv. syringae B728a
psyr Pseudomonas syringae CC1557
psp Pseudomonas savastanoi pv. phaseolicola 1448A
pamg Pseudomonas amygdali
pavl Pseudomonas avellanae
pvd Pseudomonas viridiflava
pfl Pseudomonas protegens Pf-5
pprc Pseudomonas protegens CHA0
ppro Pseudomonas protegens Cab57
pfo Pseudomonas fluorescens Pf0-1
pfs Pseudomonas fluorescens SBW25
pfe Pseudomonas fluorescens F113
pfn Pseudomonas fluorescens UK4
ppz Pseudomonas poae
pman Pseudomonas mandelii
ptv Pseudomonas trivialis
pcg Pseudomonas corrugata
pvr Pseudomonas veronii
pazo Pseudomonas azotoformans
pfw Pseudomonas simiae PCL1751
pff Pseudomonas simiae PICF7
pfx Pseudomonas lurida
pen Pseudomonas entomophila
psa Pseudomonas stutzeri A1501
psz Pseudomonas stutzeri ATCC 17588
psr Pseudomonas stutzeri DSM 4166
psc Pseudomonas stutzeri CCUG 29243
psj Pseudomonas stutzeri DSM 10701
psh Pseudomonas stutzeri RCH2
pstu Pseudomonas stutzeri 19SMN4
pstt Pseudomonas stutzeri 28a24
pbm Pseudomonas balearica
plul Pseudomonas luteola
pba Pseudomonas brassicacearum subsp. brassicacearum NFM421
pbc Pseudomonas brassicacearum DF41
ppuu Pseudomonas sp. UW4
pdr Pseudomonas sp. ATCC 13867
psv Pseudomonas sp. VLB120
psk Pseudomonas sp. TKP
pkc Pseudomonas knackmussii
pch Pseudomonas chlororaphis PA23
pcz Pseudomonas chlororaphis PCL1606
pcp Pseudomonas chlororaphis subsp. aurantiaca
pfz Pseudomonas fragi
plq Psychrobacter sp. FME2
palk Pseudomonas alkylphenolica
prh Pseudomonas rhizosphaerae
pses Pseudomonas sp. StFLB209
psem Pseudomonas sp. MRSN12121
ppsy Pseudomonas versuta
psos Pseudomonas sp. Os17
pfk Pseudomonas frederiksbergensis
ppsl Pseudomonas psychrotolerans
pset Pseudomonas sp. TCU-HL1
psil Pseudomonas silesiensis
pym Pseudomonas yamanorum
psed Pseudomonas sp. R2A2
pke Pseudomonas kribbensis
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7/37
7/37
7/37
7/37
8/37
7/37
7/37
7/37
7/37
7/37
8/37
7/37
7/37
6/37
13/37
12/37
13/37
8/37
19/37
14/37
12/37
8/37
8/37
24/37
26/37
10/37
12/37
12/37
7/37
11/37
20/37
20/37
3/37
16/37
4/37
4/37
6/37
4/37
4/37
4/37
4/37
7/37
7/37
7/37
10/37
4/37
10/37
7/37
9/37
7/37
4/37
4/37
14/37
7/37
3/37
3/37
7/37
8/37
6/37
3/37
6/37
18/37
6/37
6/37
18/37
3/37
18/37
12/37
11/37
4/37
13/37
12/37
10/37
5/37
15/37
8/37
11/37
7/37
12/37
10/37
23/37
2/37
12/37
10/37
12/37
11/37
18/37
9/37
15/37
13/37
7/37
7/37
7/37
|
Azotobacter (4)
|
avn Azotobacter vinelandii DJ
avl Azotobacter vinelandii CA
avd Azotobacter vinelandii CA6
acx Azotobacter chroococcum
|
17/37
17/37
17/37
15/37
|
Oblitimonas (1)
|
Permianibacter (1)
|
pagr Permianibacter aggregans
|
2/37
|
Psychrobacter (12)
|
pcr Psychrobacter cryohalolentis
pso Psychrobacter sp. G
pur Psychrobacter urativorans
pali Psychrobacter alimentarius
pspg Psychrobacter sp. P2G3
psyg Psychrobacter sp. P11G5
psyp Psychrobacter sp. PAMC27889
|
6/37
6/37
3/37
9/37
9/37
9/37
9/37
|
Acinetobacter (47)
|
acb Acinetobacter baumannii ATCC 17978
abm Acinetobacter baumannii SDF
aby Acinetobacter baumannii AYE
abc Acinetobacter baumannii ACICU
abn Acinetobacter baumannii AB0057
abb Acinetobacter baumannii AB307-0294
abx Acinetobacter baumannii 1656-2
abz Acinetobacter baumannii MDR-ZJ06
abr Acinetobacter baumannii MDR-TJ
abd Acinetobacter baumannii TCDC-AB0715
abh Acinetobacter baumannii TYTH-1
abad Acinetobacter baumannii D1279779
abj Acinetobacter baumannii BJAB07104
abab Acinetobacter baumannii BJAB0715
abaj Acinetobacter baumannii BJAB0868
abaz Acinetobacter baumannii ZW85-1
abk Acinetobacter baumannii AbH12O-A2
abau Acinetobacter baumannii AB030
abaa Acinetobacter baumannii AB031
abw Acinetobacter baumannii AC29
abal Acinetobacter baumannii LAC-4
acc Acinetobacter pittii
ano Acinetobacter nosocomialis
alc Acinetobacter lactucae
acal Acinetobacter calcoaceticus
acd Acinetobacter oleivorans
aci Acinetobacter baylyi
att Acinetobacter sp. TTH0-4
aei Acinetobacter equi
ajo Acinetobacter johnsonii
acw Acinetobacter sp. DUT-2
acv Acinetobacter sp. TGL-Y2
ajn Acinetobacter junii
asol Acinetobacter soli
asj Acinetobacter schindleri
aid Acinetobacter indicus
adv Acinetobacter defluvii
arj Acinetobacter radioresistens
awu Acinetobacter wuhouensis
acum Acinetobacter cumulans
agu Acinetobacter guillouiae
alw Acinetobacter lwoffii
ads Acinetobacter dispersus
aber Acinetobacter bereziniae
|
6/37
3/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
6/37
9/37
7/37
16/37
6/37
7/37
12/37
6/37
12/37
15/37
6/37
7/37
6/37
12/37
12/37
6/37
17/37
12/37
12/37
12/37
12/37
12/37
13/37
7/37
|
Moraxella (8)
|
moi Moraxella ovis
|
7/37
|
unclassified Moraxellaceae (1)
|
mbah Moraxellaceae bacterium HYN0046
|
2/37
|
Shewanella (34)
|
sdn Shewanella denitrificans
spl Shewanella pealeana
shl Shewanella halifaxensis
swd Shewanella woodyi
|
2/37
6/37
6/37
8/37
|
Idiomarina (5)
|
Colwellia (7)
|
colw Colwellia sp. PAMC 21821
cber Colwellia beringensis
|
7/37
7/37
|
Litorilituus (1)
|
Thalassotalea (2)
|
tht Thalassotalea sp. HSM 43
|
7/37
|
Pseudoalteromonas (23)
|
pha Pseudoalteromonas haloplanktis
pat Pseudoalteromonas atlantica
psm Pseudoalteromonas sp. SM9913
prr Pseudoalteromonas rubra
ptn Pseudoalteromonas translucida
pea Pseudoalteromonas espejiana
png Pseudoalteromonas nigrifaciens
pcar Pseudoalteromonas carrageenovora
|
8/37
4/37
2/37
2/37
8/37
2/37
9/37
2/37
|
Marinobacter (12)
|
mhc Marinobacter hydrocarbonoclasticus ATCC 49840
mad Marinobacter adhaerens
msr Marinobacter salarius
mpq Marinobacter psychrophilus
mari Marinobacter sp. CP1
mlq Marinobacter sp. LQ44
msq Marinobacter salinus
marj Marinobacter sp. JH2
|
7/37
16/37
13/37
10/37
9/37
10/37
10/37
11/37
|
Alteromonas (23)
|
amag Alteromonas mediterranea MED64
amg Alteromonas macleodii English Channel 673
alr Alteromonas sp. RKMC-009
|
2/37
6/37
11/37
|
Glaciecola (2)
|
Paraglaciecola (2)
|
Lacimicrobium (1)
|
lal Lacimicrobium alkaliphilum
|
8/37
|
Catenovulum (1)
|
cate Catenovulum sp. CCB-QB4
|
2/37
|
Saliniradius (1)
|
salh Saliniradius amylolyticus
|
8/37
|
Salinimonas (2)
|
Hydrocarboniclastica (1)
|
hmi Hydrocarboniclastica marina
|
2/37
|
Psychromonas (2)
|
Ferrimonas (2)
|
Moritella (3)
|
Cellvibrio (5)
|
cja Cellvibrio japonicus
ceg Cellvibrio sp. KY-GH-1
|
3/37
2/37
|
Saccharophagus (1)
|
Teredinibacter (1)
|
ttu Teredinibacter turnerae
|
5/37
|
Simiduia (1)
|
Spongiibacter (1)
|
spoi Spongiibacter sp. IMCC21906
|
17/37
|
Zhongshania (1)
|
zal Zhongshania aliphaticivorans
|
14/37
|
Oceanicoccus (1)
|
Microbulbifer (6)
|
mict Microbulbifer sp. THAF38
|
4/37
|
Halioglobus (2)
|
hja Halioglobus japonicus
halc Halioglobus maricola
|
6/37
6/37
|
Kineobactrum (1)
|
kim Kineobactrum sp. M2
|
10/37
|
Coxiella (8)
|
Rickettsiella (1)
|
Aquicella (2)
|
Legionella (23)
|
Tatlockia (1)
|
Methylococcus (2)
|
Methylomonas (5)
|
Methylomicrobium (2)
|
Methylovulum (1)
|
Methylocaldum (1)
|
mmai Methylocaldum marinum
|
4/37
|
Methylospira (1)
|
Francisella (43)
|
Allofrancisella (2)
|
Hydrogenovibrio (3)
|
Thiomicrospira (3)
|
Methylophaga (2)
|
Cycloclasticus (3)
|
cyq Cycloclasticus sp. P1
cza Cycloclasticus zancles
cyy Cycloclasticus sp. PY97N
|
22/37
22/37
22/37
|
Piscirickettsia (1)
|
Thiomicrorhabdus (1)
|
Thioploca (1)
|
Beggiatoa (1)
|
blep Beggiatoa leptomitiformis
|
11/37
|
Nitrosococcus (4)
|
Allochromatium (1)
|
Thiocystis (1)
|
Thioflavicoccus (1)
|
tmb Thioflavicoccus mobilis
|
4/37
|
Marichromatium (1)
|
mpur Marichromatium purpuratum
|
2/37
|
Tenderia (1)
|
Nitrosoglobus (1)
|
Thiodictyon (1)
|
Rheinheimera (1)
|
Thermochromatium (1)
|
Alkalilimnicola (1)
|
aeh Alkalilimnicola ehrlichii
|
7/37
|
Halorhodospira (2)
|
Ectothiorhodospira (2)
|
Thioalkalivibrio (5)
|
Spiribacter (4)
|
Acidihalobacter (1)
|
Halothiobacillus (2)
|
Wenzhouxiangella (1)
|
wma Wenzhouxiangella marina
|
2/37
|
Woeseia (1)
|
Granulosicoccus (1)
|
gai Granulosicoccus antarcticus
|
3/37
|
Guyparkeria (1)
|
Thiohalobacter (1)
|
Hahella (2)
|
hch Hahella chejuensis
hahe Hahella sp. KA22
|
2/37
2/37
|
Chromohalobacter (1)
|
csa Chromohalobacter salexigens
|
3/37
|
Halomonas (18)
|
hcs Halomonas campaniensis
hak Halomonas sp. KO116
ham Halomonas sp. R57-5
hhu Halomonas huangheensis
hsi Halomonas aestuarii
halo Halomonas sp. 1513
hhh Halomonas hydrothermalis
hbe Halomonas beimenensis
halk Halomonas alkaliphila
hvn Halomonas venusta
hol Halomonas olivaria
hsr Halomonas sulfidaeris
hmd Halomonas meridiana
|
6/37
13/37
2/37
6/37
7/37
2/37
8/37
8/37
6/37
6/37
4/37
3/37
4/37
|
Portiera (9)
|
Carsonella (7)
|
Evansia (1)
|
Zymobacter (1)
|
Halotalea (1)
|
haa Halotalea alkalilenta
|
3/37
|
Cobetia (1)
|
Kushneria (3)
|
Pistricoccus (1)
|
Alcanivorax (5)
|
apac Alcanivorax pacificus
axe Alcanivorax xenomutans
|
16/37
2/37
|
Ketobacter (1)
|
kak Ketobacter alkanivorans
|
7/37
|
Kangiella (4)
|
kko Kangiella koreensis
kge Kangiella geojedonensis
ksd Kangiella sediminilitoris
kpd Kangiella profundi
|
2/37
2/37
2/37
2/37
|
Marinomonas (3)
|
mmw Marinomonas sp. MWYL1
mme Marinomonas mediterranea
mpc Marinomonas posidonica
|
7/37
12/37
6/37
|
Thalassolituus (2)
|
Oleispira (1)
|
Marinobacterium (1)
|
mars Marinobacterium aestuarii
|
8/37
|
Bacterioplanes (1)
|
Neptunomonas (1)
|
ncu Neptunomonas concharum
|
11/37
|
Nitrincola (1)
|
nik Nitrincola sp. KXZD1103
|
12/37
|
Bermanella (1)
|
Gynuella (1)
|
gsn Gynuella sunshinyii
|
4/37
|
Reinekea (1)
|
Oleiphilus (1)
|
Litoricola (1)
|
Aeromonas (22)
|
Tolumonas (1)
|
Oceanimonas (1)
|
oce Oceanimonas sp. GK1
|
8/37
|
Oceanisphaera (2)
|
Zobellella (1)
|
zdf Zobellella denitrificans
|
17/37
|
Dichelobacter (1)
|
Cardiobacterium (1)
|
Gilliamella (1)
|
Frischella (1)
|
Orbus (1)
|
Steroidobacter (1)
|
Solimonas (1)
|
sok Solimonas sp. K1W22B-7
|
9/37
|
Sinimarinibacterium (1)
|
sini Sinimarinibacterium sp. NLF-5-8
|
11/37
|
Immundisolibacter (1)
|
gbi Immundisolibacter cernigliae
|
24/37
|
Sulfuricaulis (1)
|
slim Sulfuricaulis limicola
|
2/37
|
Sulfurifustis (1)
|
sva Sulfurifustis variabilis
|
3/37
|
Acidiferrobacter (1)
|
Salinisphaera (1)
|
saln Salinisphaera sp. LB1
|
5/37
|
Thiolapillus (1)
|
tbn Thiolapillus brandeum
|
12/37
|
Sedimenticola (1)
|
Thioglobus (3)
|
Pseudohongiella (1)
|
Nardonella (1)
|
Reidiella (1)
|
Ruthia (1)
|
Vesicomyosocius (1)
|
unclassified Gammaproteobacteria (6)
|
gpb Gamma proteobacterium HdN1
|
6/37
|
Betaproteobacteria (446)
|
Neisseria (30)
|
nzl Neisseria zalophi
|
3/37
|
Snodgrassella (1)
|
Kingella (1)
|
Vitreoscilla (2)
|
vff Vitreoscilla filiformis
|
12/37
|
Eikenella (2)
|
Simonsiella (1)
|
unclassified Neisseriaceae (1)
|
Chromobacterium (7)
|
chro Chromobacterium sp. ATCC 53434
crz Chromobacterium rhizoryzae
|
9/37
5/37
|
Iodobacter (1)
|
Laribacter (1)
|
Pseudogulbenkiania (1)
|
pse Pseudogulbenkiania sp. NH8B
|
8/37
|
Jeongeupia (1)
|
Aquaspirillum (1)
|
aql Aquaspirillum sp. LM1
|
12/37
|
Aquitalea (2)
|
aqs Aquitalea sp. USM4
|
5/37
|
Deefgea (1)
|
Ralstonia (13)
|
rso Ralstonia solanacearum GMI1000
rsc Ralstonia solanacearum CFBP2957
rsl Ralstonia solanacearum PSI07
rsn Ralstonia solanacearum Po82
rsm Ralstonia solanacearum CMR15
rse Ralstonia solanacearum FQY_4
rsy Ralstonia solanacearum UY031
rpi Ralstonia pickettii 12J
rpf Ralstonia pickettii 12D
rpj Ralstonia pickettii DTP0602
rmn Ralstonia mannitolilytica
rin Ralstonia insidiosa
rpu Ralstonia pseudosolanacearum
|
11/37
7/37
10/37
10/37
11/37
11/37
10/37
18/37
21/37
23/37
10/37
18/37
11/37
|
Cupriavidus (13)
|
reh Cupriavidus necator H16
cnc Cupriavidus necator N-1
cuh Cupriavidus necator NH9
reu Cupriavidus pinatubonensis JMP134
rme Cupriavidus metallidurans
cti Cupriavidus taiwanensis
cbw Cupriavidus basilensis
ccup Cupriavidus sp. USMAHM13
cup Cupriavidus malaysiensis
cuu Cupriavidus sp. USMAA2-4
cpau Cupriavidus pauculus
cox Cupriavidus oxalaticus
|
20/37
25/37
21/37
16/37
18/37
7/37
20/37
21/37
22/37
21/37
8/37
20/37
|
Burkholderia (89)
|
bma Burkholderia mallei ATCC 23344
bmv Burkholderia mallei SAVP1
bml Burkholderia mallei NCTC 10229
bmn Burkholderia mallei NCTC 10247
bmal Burkholderia mallei 23344
bmae Burkholderia mallei 6
bmaq Burkholderia mallei BMQ
bmai Burkholderia mallei 2000031063
bmaf Burkholderia mallei FMH 23344
bmaz Burkholderia mallei NCTC 10247
bmab Burkholderia mallei 2002734299
bps Burkholderia pseudomallei K96243
bpm Burkholderia pseudomallei 1710b
bpl Burkholderia pseudomallei 1106a
bpd Burkholderia pseudomallei 668
bpr Burkholderia pseudomallei MSHR346
bpse Burkholderia pseudomallei MSHR305
bpsm Burkholderia pseudomallei MSHR511
bpsu Burkholderia pseudomallei MSHR146
bpsd Burkholderia pseudomallei MSHR520
bpz Burkholderia pseudomallei 1026b
bpq Burkholderia pseudomallei BPC006
bpk Burkholderia pseudomallei NCTC 13179
bpsh Burkholderia pseudomallei HBPUB10134a
bpsa Burkholderia pseudomallei NAU35A-3
bpso Burkholderia pseudomallei A79A
but Burkholderia pseudomallei TSV202
bte Burkholderia thailandensis E264
btq Burkholderia thailandensis 2002721723
btj Burkholderia thailandensis E444
btz Burkholderia thailandensis H0587
btd Burkholderia thailandensis MSMB121
btv Burkholderia thailandensis MSMB59
bthe Burkholderia thailandensis E254
bthm Burkholderia thailandensis USAMRU Malaysia #20
btha Burkholderia thailandensis 2003015869
bthl Burkholderia thailandensis 2002721643
bok Burkholderia oklahomensis E0147
boc Burkholderia oklahomensis C6786
buu Burkholderia sp. BDU6
bvi Burkholderia vietnamiensis G4
bve Burkholderia vietnamiensis LMG 10929
bur Burkholderia lata
bcn Burkholderia cenocepacia AU 1054
bch Burkholderia cenocepacia HI2424
bcm Burkholderia cenocepacia MC0-3
bcj Burkholderia cenocepacia J2315
bcen Burkholderia cenocepacia DDS 22E-1
bcew Burkholderia cenocepacia DWS 37E-2
bceo Burkholderia cenocepacia H111
bam Burkholderia ambifaria AMMD
bac Burkholderia ambifaria MC40-6
bmj Burkholderia multivorans ATCC 17616 (Tohoku)
bmu Burkholderia multivorans ATCC 17616 (JGI)
bmk Burkholderia multivorans DDS 15A-1
bmul Burkholderia multivorans ATCC BAA-247
bct Burkholderia cepacia GG4
bced Burkholderia cepacia DDS 7H-2
bcep Burkholderia cepacia ATCC 25416
bdl Burkholderia dolosa
bpyr Burkholderia pyrrocinia
bcon Burkholderia contaminans
bub Burkholderia ubonensis
bdf Burkholderia diffusa
blat Burkholderia latens
btei Burkholderia territorii
bsem Burkholderia seminalis
bpsl Burkholderia pseudomultivorans
bmec Burkholderia metallica
bstg Burkholderia stagnalis
bstl Burkholderia stabilis
bgl Burkholderia glumae BGR1
bgu Burkholderia glumae LMG 2196 = ATCC 33617
bug Burkholderia sp. CCGE1001
bgf Burkholderia sp. CCGE1003
bgd Burkholderia gladioli BSR3
bgo Burkholderia gladioli ATCC 10248
byi Burkholderia sp. YI23
buk Burkholderia sp. KJ006
buo Burkholderia insecticola
bue Burkholderia sp. RPE67
bul Burkholderia sp. 2002721687
buq Burkholderia sp. HB1
bgp Burkholderia plantarii PG1
bpla Burkholderia plantarii ATCC 43733
bud Burkholderia sp. Bp5365
buz Burkholderia sp. OLGA172
bum Burkholderia sp. PAMC 26561
bui Burkholderia sp. PAMC 28687
|
10/37
10/37
10/37
10/37
10/37
10/37
10/37
10/37
10/37
10/37
10/37
12/37
13/37
13/37
13/37
3/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
15/37
12/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
13/37
18/37
12/37
21/37
16/37
16/37
14/37
15/37
24/37
13/37
21/37
14/37
14/37
5/37
11/37
11/37
15/37
15/37
24/37
19/37
8/37
18/37
21/37
8/37
21/37
13/37
21/37
18/37
24/37
18/37
8/37
21/37
9/37
9/37
17/37
5/37
6/37
10/37
11/37
12/37
8/37
13/37
13/37
18/37
4/37
4/37
13/37
17/37
8/37
8/37
|
Paraburkholderia (18)
|
bxe Paraburkholderia xenovorans LB400
bxb Paraburkholderia xenovorans LB400
bph Paraburkholderia phymatum
bge Paraburkholderia sp. CCGE1002
bpx Paraburkholderia phenoliruptrix
bpy Paraburkholderia phytofirmans
bfn Paraburkholderia fungorum
bcai Paraburkholderia caribensis
pspw Paraburkholderia sprentiae
para Paraburkholderia sp. SOS3
parb Paraburkholderia aromaticivorans
phs Paraburkholderia hospita
pter Paraburkholderia terrae
pgp Paraburkholderia graminis
pcj Paraburkholderia caledonica
pts Paraburkholderia terricola
pcaf Paraburkholderia caffeinilytica
pmeg Paraburkholderia megapolitana
|
26/37
24/37
13/37
11/37
17/37
12/37
12/37
10/37
11/37
2/37
18/37
16/37
14/37
4/37
8/37
10/37
19/37
12/37
|
Mycetohabitans (1)
|
brh Paraburkholderia rhizoxinica
|
8/37
|
Polynucleobacter (4)
|
Pandoraea (14)
|
ppk Pandoraea pnomenusa 3kgm
ppno Pandoraea pnomenusa RB38
ppnm Pandoraea pnomenusa DSM 16536
prb Pandoraea pnomenusa
ppul Pandoraea pulmonicola
pspu Pandoraea sputorum
papi Pandoraea apista
pve Pandoraea vervacti
pox Pandoraea oxalativorans
ptx Pandoraea thiooxydans
pfg Pandoraea faecigallinarum
pnr Pandoraea norimbergensis
pand Pandoraea sp. XY-2
pfib Pandoraea fibrosis
|
17/37
11/37
11/37
17/37
11/37
11/37
11/37
14/37
11/37
7/37
11/37
11/37
12/37
12/37
|
Paucimonas (1)
|
plg Paucimonas lemoignei
|
3/37
|
Ephemeroptericola (1)
|
Lautropia (1)
|
Mycoavidus (1)
|
Caballeronia (1)
|
caba Caballeronia sp. SBC2
|
17/37
|
Limnobacter (1)
|
limn Limnobacter sp. SAORIC-580
|
12/37
|
Bordetella (24)
|
bpar Bordetella parapertussis Bpp5
bpa Bordetella parapertussis 12822
bbh Bordetella bronchiseptica 253
bbr Bordetella bronchiseptica RB50
bbm Bordetella bronchiseptica MO149
bbx Bordetella bronchiseptica S798
bpt Bordetella petrii
bav Bordetella avium
bho Bordetella holmesii ATCC 51541
bhm Bordetella holmesii 44057
bhz Bordetella hinzii
btrm Bordetella trematum
bpdz Bordetella pseudohinzii
boh Bordetella sp. H567
boz Bordetella sp. HZ20
boj Bordetella sp. J329
|
7/37
2/37
8/37
8/37
8/37
8/37
14/37
4/37
5/37
5/37
6/37
6/37
4/37
4/37
2/37
18/37
|
Achromobacter (9)
|
axy Achromobacter xylosoxidans A8
axo Achromobacter xylosoxidans NH44784-1996
axn Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
axx Achromobacter xylosoxidans NCTC10807
adt Achromobacter denitrificans
ais Achromobacter insolitus
asw Achromobacter spanius
achr Achromobacter sp. AONIH1
achb Achromobacter sp. B7
|
14/37
5/37
5/37
5/37
5/37
13/37
9/37
19/37
12/37
|
Taylorella (5)
|
Pusillimonas (3)
|
put Pusillimonas sp. T7-7
pus Pusillimonas sp. ye3
pud Pusillimonas sp. DMV24BSW_D
|
5/37
2/37
16/37
|
Advenella (2)
|
Castellaniella (1)
|
cdn Castellaniella defragrans
|
14/37
|
Basilea (1)
|
Alcaligenes (3)
|
afa Alcaligenes faecalis ZD02
afq Alcaligenes faecalis JQ135
aaqu Alcaligenes aquatilis
|
12/37
12/37
12/37
|
Paenalcaligenes (1)
|
phn Paenalcaligenes hominis
|
4/37
|
Orrella (1)
|
Oligella (1)
|
our Oligella urethralis
|
6/37
|
Pigmentiphaga (2)
|
pig Pigmentiphaga sp. H8
|
18/37
|
Kerstersia (1)
|
kgy Kerstersia gyiorum
|
18/37
|
Rhodoferax (6)
|
rfr Rhodoferax ferrireducens
rsb Rhodoferax saidenbachensis
rhy Rhodoferax koreense
|
5/37
4/37
5/37
|
Polaromonas (5)
|
pol Polaromonas sp. JS666
pna Polaromonas naphthalenivorans
pos Polaromonas sp. SP1
poo Polaromonas sp. Pch-P
|
9/37
18/37
4/37
4/37
|
Acidovorax (11)
|
aav Acidovorax citrulli
ajs Acidovorax sp. JS42
dia Acidovorax ebreus
aaa Acidovorax avenae
ack Acidovorax sp. KKS102
acra Acidovorax sp. RAC01
acid Acidovorax carolinensis NA2
acip Acidovorax carolinensis P4
acin Acidovorax carolinensis NA3
acis Acidovorax carolinensis P3
acio Acidovorax sp. 1608163
|
2/37
15/37
2/37
6/37
7/37
10/37
15/37
15/37
15/37
15/37
5/37
|
Verminephrobacter (1)
|
vei Verminephrobacter eiseniae
|
15/37
|
Delftia (4)
|
dac Delftia acidovorans
del Delftia sp. Cs1-4
dts Delftia tsuruhatensis
dhk Delftia sp. HK171
|
5/37
5/37
5/37
5/37
|
Variovorax (6)
|
vap Variovorax paradoxus S110
vpe Variovorax paradoxus EPS
vpd Variovorax paradoxus B4
vbo Variovorax boronicumulans
vam Variovorax sp. PMC12
|
5/37
5/37
14/37
17/37
6/37
|
Comamonas (5)
|
ctt Comamonas thiooxydans
ctes Comamonas testosteroni TK102
cke Comamonas kerstersii
cser Comamonas serinivorans
cof Comamonas sp. NLF 7-7
|
15/37
10/37
4/37
12/37
12/37
|
Alicycliphilus (2)
|
adn Alicycliphilus denitrificans BC
adk Alicycliphilus denitrificans K601
|
15/37
12/37
|
Ramlibacter (1)
|
rta Ramlibacter tataouinensis
|
2/37
|
Symbiobacter (1)
|
Ottowia (2)
|
Limnohabitans (2)
|
lih Limnohabitans sp. 63ED37-2
|
3/37
|
Hydrogenophaga (6)
|
hyr Hydrogenophaga sp. RAC07
hyb Hydrogenophaga sp. PBC
hyl Hydrogenophaga sp. LPB0072
hpse Hydrogenophaga pseudoflava
hyn Hydrogenophaga sp. BPS33
|
4/37
5/37
12/37
17/37
18/37
|
Diaphorobacter (2)
|
dpy Diaphorobacter polyhydroxybutyrativorans
dih Diaphorobacter sp. HDW4A
|
5/37
21/37
|
Simplicispira (1)
|
simp Simplicispira suum
|
15/37
|
Melaminivora (2)
|
melm Pulveribacter suum
mela Melaminivora sp. SC2-9
|
2/37
11/37
|
Serpentinomonas (2)
|
cbaa Serpentinomonas raichei
cbab Serpentinomonas mccroryi
|
3/37
3/37
|
Methylibium (2)
|
mpt Methylibium petroleiphilum
metp Methylibium sp. Pch-M
|
12/37
12/37
|
Herminiimonas (1)
|
har Herminiimonas arsenicoxydans
|
2/37
|
Janthinobacterium (8)
|
mms Janthinobacterium sp. Marseille
jag Janthinobacterium agaricidamnosum
jaj Janthinobacterium sp. 17J80-10
jas Janthinobacterium sp. SNU WT3
|
2/37
9/37
10/37
6/37
|
Herbaspirillum (6)
|
hse Herbaspirillum seropedicae SmR1
hsz Herbaspirillum seropedicae Z67
hht Herbaspirillum hiltneri
hrb Herbaspirillum rubrisubalbicans
hee Herbaspirillum sp. meg3
hhf Herbaspirillum huttiense
|
10/37
10/37
2/37
10/37
9/37
10/37
|
Zinderia (1)
|
Collimonas (3)
|
cfu Collimonas fungivorans
care Collimonas arenae
cpra Collimonas pratensis
|
2/37
2/37
2/37
|
Massilia (10)
|
mnr Massilia sp. NR 4-1
masw Massilia sp. WG5
mali Massilia albidiflava
mum Massilia umbonata
|
3/37
16/37
7/37
7/37
|
Oxalobacter (1)
|
Undibacterium (2)
|
Noviherbaspirillum (1)
|
Duganella (1)
|
Sutterella (2)
|
Leptothrix (1)
|
lch Leptothrix cholodnii
|
12/37
|
Thiomonas (2)
|
Rubrivivax (2)
|
Roseateles (1)
|
rdp Roseateles depolymerans
|
2/37
|
Paucibacter (1)
|
pkt Paucibacter sp. KCTC 42545
|
2/37
|
Mitsuaria (1)
|
miu Mitsuaria sp. 7
|
2/37
|
Rhizobacter (1)
|
rgu Rhizobacter gummiphilus
|
10/37
|
Aquabacterium (1)
|
aon Aquabacterium olei
|
7/37
|
Sphaerotilus (1)
|
snn Sphaerotilus natans
|
11/37
|
Xylophilus (1)
|
xyk Xylophilus sp. KACC 21265
|
2/37
|
unclassified Burkholderiales (3)
|
pbh Polyangium brachysporum
|
2/37
|
Nitrosomonas (7)
|
neu Nitrosomonas europaea
net Nitrosomonas eutropha
nit Nitrosomonas sp. AL212
nco Nitrosomonas communis
nur Nitrosomonas ureae
|
4/37
4/37
4/37
4/37
4/37
|
Nitrosospira (2)
|
nmu Nitrosospira multiformis
nlc Nitrosospira lacus
|
4/37
4/37
|
Sulfuritalea (1)
|
Methyloversatilis (1)
|
Thiobacillus (1)
|
Methylobacillus (1)
|
Methylotenera (2)
|
Methylovorus (2)
|
Methylopumilus (2)
|
Methylophilus (1)
|
Sideroxydans (1)
|
Gallionella (1)
|
Sulfuricella (1)
|
Sulfuriferula (3)
|
Ferriphaselus (1)
|
fam Ferriphaselus amnicola
|
3/37
|
Nitrotoga (1)
|
Aromatoleum (1)
|
eba Aromatoleum aromaticum
|
6/37
|
Azospira (1)
|
Rugosibacter (1)
|
rbu Rugosibacter aromaticivorans
|
18/37
|
Oryzomicrobium (1)
|
otr Oryzomicrobium terrae
|
2/37
|
unclassified Rhodocyclaceae (1)
|
Dechloromonas (2)
|
dar Dechloromonas aromatica
dey Dechloromonas sp. HYN0024
|
18/37
12/37
|
Azoarcus (9)
|
azo Azoarcus sp. BH72
azi Azoarcus sp. CIB
aoa Azoarcus olearius
atw Azoarcus sp. SY39
acom Azoarcus communis
azd Azoarcus sp. DN11
azr Azoarcus sp. DD4
azq Azoarcus sp. M9-3-2
|
18/37
8/37
18/37
2/37
9/37
12/37
18/37
12/37
|
Thauera (5)
|
tmz Thauera sp. MZ1T
thu Thauera humireducens
tcl Thauera chlorobenzoica
thk Thauera sp. K11
tak Thauera aromatica
|
21/37
13/37
3/37
18/37
3/37
|
unclassified Zoogloeaceae (1)
|
Ferrovum (1)
|
Accumulibacter (1)
|
Tremblaya (3)
|
Kinetoplastibacterium (8)
|
Profftella (1)
|
Nasuia (1)
|
Vidania (1)
|
unclassified Betaproteobacteria (3)
|
Epsilonproteobacteria (187)
|
Helicobacter (76)
|
Wolinella (1)
|
Sulfurimonas (5)
|
Sulfuricurvum (2)
|
Campylobacter (67)
|
cjd Campylobacter jejuni subsp. doylei 269.97
clq Campylobacter lari CCUG 22395
ccf Campylobacter coli RM1875
|
2/37
2/37
2/37
|
Arcobacter (13)
|
abu Arcobacter butzleri RM4018
abt Arcobacter butzleri ED-1
abl Arcobacter butzleri 7h1h
ant Arcobacter nitrofigilis
ask Arcobacter skirrowii
ahs Arcobacter halophilus
amar Arcobacter marinus
atp Arcobacter trophiarum
aell Arcobacter ellisii
aaqi Arcobacter aquimarinus
|
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
12/37
|
Aliiarcobacter (2)
|
apoc Arcobacter porcinus
|
2/37
|
Halarcobacter (2)
|
hbv Halarcobacter bivalviorum
hebr Halarcobacter ebronensis
|
2/37
2/37
|
Pseudoarcobacter (1)
|
paco Pseudoarcobacter acticola
|
2/37
|
unclassified Arcobacter (2)
|
arc Arcobacter sp. L
alp Arcobacter sp. LPB0137
|
12/37
2/37
|
Sulfurospirillum (7)
|
shal Sulfurospirillum halorespirans
|
3/37
|
Hydrogenimonas (1)
|
Nitratifractor (1)
|
Nitratiruptor (1)
|
Sulfurovum (2)
|
Nautilia (2)
|
Caminibacter (1)
|
Cetia (1)
|
Deltaproteobacteria (90)
|
Geobacter (11)
|
Geoalkalibacter (1)
|
Pelobacter (4)
|
pef Pelobacter sp. SFB93
|
2/37
|
Desulfuromonas (2)
|
des Desulfuromonas soudanensis
|
3/37
|
Desulfovibrio (18)
|
dma Desulfovibrio magneticus
|
2/37
|
Pseudodesulfovibrio (5)
|
dpi Pseudodesulfovibrio piezophilus
|
2/37
|
Lawsonia (2)
|
Desulfomicrobium (2)
|
Desulfohalobium (1)
|
Desulfotalea (1)
|
Desulfurivibrio (1)
|
Desulfobulbus (2)
|
Desulfocapsa (1)
|
Desulfococcus (2)
|
dml Desulfococcus multivorans
|
4/37
|
Desulfatibacillum (1)
|
Desulfobacterium (1)
|
Desulfobacula (1)
|
Desulfosarcina (3)
|
dwd Desulfosarcina widdelii
|
4/37
|
Anaeromyxobacter (4)
|
Myxococcus (3)
|
mxa Myxococcus xanthus
msd Myxococcus stipitatus
mym Myxococcus hansupus
|
2/37
3/37
5/37
|
Corallococcus (3)
|
ccx Corallococcus coralloides
mfu Corallococcus macrosporus
mmas Myxococcus macrosporus
|
6/37
2/37
2/37
|
Stigmatella (1)
|
sur Stigmatella aurantiaca
|
2/37
|
Archangium (1)
|
age Archangium gephyra
|
2/37
|
Melittangium (1)
|
mbd Melittangium boletus
|
4/37
|
Cystobacter (1)
|
Vulgatibacter (1)
|
Sorangium (2)
|
Chondromyces (1)
|
Sandaracinus (1)
|
Labilithrix (1)
|
Minicystis (1)
|
mrm Minicystis rosea
|
3/37
|
Haliangium (1)
|
hoh Haliangium ochraceum
|
7/37
|
Syntrophus (1)
|
Desulfobacca (1)
|
Desulfomonile (1)
|
dti Desulfomonile tiedjei
|
5/37
|
Syntrophobacter (1)
|
sfu Syntrophobacter fumaroxidans
|
4/37
|
Desulfoglaeba (1)
|
Desulfarculus (1)
|
Hippea (1)
|
Desulfurella (1)
|
Bradymonas (1)
|
Alphaproteobacteria (705)
|
Rickettsia (48)
|
Orientia (2)
|
Phycorickettsia (1)
|
Wolbachia (10)
|
Anaplasma (10)
|
Ehrlichia (14)
|
Neorickettsia (4)
|
Midichloria (1)
|
Fokinia (1)
|
unclassified Rickettsiales (2)
|
Paracaedibacter (1)
|
Paracaedimonas (1)
|
Nucleicultrix (1)
|
unclassified Holosporaceae (1)
|
Mesorhizobium (11)
|
mlo Mesorhizobium japonicum MAFF 303099
mln Mesorhizobium loti NZP2037
mci Mesorhizobium ciceri (biovar Biserrulae)
mop Mesorhizobium opportunistum
mam Mesorhizobium australicum
mamo Mesorhizobium amorphae
meso Mesorhizobium sp. B7
mesw Mesorhizobium sp. WSM1497
mesm Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
mesp Mesorhizobium sp. Pch-S
mhua Mesorhizobium huakuii
|
3/37
3/37
4/37
4/37
4/37
3/37
5/37
4/37
3/37
6/37
9/37
|
Chelativorans (1)
|
mes Chelativorans sp. BNC1
|
4/37
|
Hoeflea (1)
|
Aminobacter (2)
|
aak Aminobacter aminovorans
amih Aminobacter sp. MSH1
|
6/37
13/37
|
Phyllobacterium (1)
|
pht Phyllobacterium zundukense
|
9/37
|
Roseitalea (1)
|
rpod Roseitalea porphyridii
|
2/37
|
Nitratireductor (1)
|
niy Nitratireductor sp. SY7
|
3/37
|
Oricola (1)
|
orm Oricola sp. MEBiC13590
|
2/37
|
Parvibaculum (1)
|
pla Parvibaculum lavamentivorans
|
8/37
|
Pyruvatibacter (1)
|
unclassified Rhodobiaceae (1)
|
Sinorhizobium (15)
|
sme Sinorhizobium meliloti 1021
smk Sinorhizobium meliloti AK83
smq Sinorhizobium meliloti BL225C
smx Sinorhizobium meliloti SM11
smi Sinorhizobium meliloti Rm41
smeg Sinorhizobium meliloti GR4
smel Sinorhizobium meliloti 2011
smer Sinorhizobium meliloti RMO17
smd Sinorhizobium medicae
rhi Sinorhizobium fredii NGR234
sfh Sinorhizobium fredii HH103
sfd Sinorhizobium fredii USDA 257
six Sinorhizobium sp. RAC02
same Sinorhizobium americanum
sino Sinorhizobium sp. CCBAU 05631
|
3/37
3/37
3/37
3/37
6/37
3/37
3/37
6/37
3/37
5/37
10/37
10/37
3/37
4/37
9/37
|
Ensifer (4)
|
ead Ensifer adhaerens OV14
eah Ensifer adhaerens Casida A
esj Ensifer sojae
eak Ensifer alkalisoli
|
9/37
9/37
8/37
15/37
|
Agrobacterium (10)
|
atu Agrobacterium fabrum
ara Agrobacterium radiobacter
atf Agrobacterium tumefaciens Ach5
ata Agrobacterium tumefaciens S33
avi Agrobacterium vitis
agr Agrobacterium sp. H13-3
agc Agrobacterium sp. RAC06
aro Agrobacterium rhizogenes
agt Agrobacterium sp. 33MFTa1.1
alf Agrobacterium larrymoorei
|
6/37
16/37
2/37
4/37
2/37
3/37
6/37
3/37
7/37
2/37
|
Rhizobium (26)
|
ret Rhizobium etli CFN 42
rec Rhizobium etli CIAT 652
rel Rhizobium etli bv. mimosae Mim1
rep Rhizobium etli bv. phaseoli IE4803
rei Rhizobium sp. IE4771
rle Rhizobium leguminosarum bv. viciae 3841
rlt Rhizobium leguminosarum bv. trifolii WSM2304
rlg Rhizobium leguminosarum bv. trifolii WSM1325
rlb Rhizobium leguminosarum bv. trifolii WSM1689
rlu Rhizobium leguminosarum bv. trifolii CB782
rtr Rhizobium tropici
rir Rhizobium sp. IRBG74
rhl Rhizobium favelukesii
rga Rhizobium gallicum
rhn Rhizobium sp. N1341
rpha Rhizobium phaseoli
rht Rhizobium sp. NT-26
rhx Rhizobium sp. N731
rhv Rhizobium sp. S41
rhk Rhizobium sp. Kim5
rez Rhizobium esperanzae
rjg Rhizobium jaguaris
rhr Rhizobium sp. 11515TR
rgr Rhizobium grahamii
rad Rhizobium acidisoli
rpus Rhizobium pusense
|
6/37
6/37
3/37
5/37
5/37
7/37
6/37
6/37
6/37
5/37
6/37
6/37
6/37
6/37
5/37
5/37
3/37
5/37
3/37
11/37
5/37
4/37
4/37
3/37
6/37
4/37
|
Neorhizobium (4)
|
ngl Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
ngg Neorhizobium galegae bv. orientalis HAMBI 540
neo Neorhizobium sp. SOG26
nen Neorhizobium sp. NCHU2750
|
7/37
4/37
3/37
4/37
|
Liberibacter (7)
|
Shinella (1)
|
shz Shinella sp. HZN7
|
7/37
|
Georhizobium (1)
|
abaw Georhizobium profundi
|
8/37
|
Brucella (44)
|
bme Brucella melitensis bv. 1 16M
bmel Brucella melitensis bv. 1 16M
bmi Brucella melitensis ATCC 23457
bmz Brucella melitensis M28
bmg Brucella melitensis M5-90
bmw Brucella melitensis NI
bmee Brucella melitensis bv. 3 Ether
bmf Brucella abortus 2308
bmb Brucella abortus bv. 1 9-941
bmc Brucella abortus S19
baa Brucella abortus A13334
babo Brucella abortus bv. 2 86/8/59
babr Brucella abortus bv. 6 870
babt Brucella abortus 63 75
babb Brucella abortus BDW
babu Brucella abortus bv. 9 C68
babs Brucella abortus BER
babc Brucella abortus NCTC 10505
bms Brucella suis 1330
bsi Brucella suis 1330
bsf Brucella suis bv. 1
bsui Brucella suis bv. 2 Bs143CITA
bsup Brucella suis bv. 2 PT09143
bsuv Brucella suis bv. 2 PT09172
bsuc Brucella suis bv. 2 Bs364CITA
bmt Brucella suis ATCC 23445
bsz Brucella suis bv. 3
bsv Brucella suis VBI22
bsw Brucella suis ZW043
bsg Brucella suis ZW046
bov Brucella ovis
bcs Brucella canis ATCC 23365
bsk Brucella canis HSK A52141
bol Brucella canis Oliveri
bcar Brucella canis RM6/66
bcas Brucella canis SVA13
bmr Brucella microti
bpp Brucella pinnipedialis B2/94
bpv Brucella pinnipedialis 6/566
bcet Brucella ceti TE10759-12
bcee Brucella ceti TE28753-12
bvl Brucella vulpis
bru Brucella sp. 2002734562
brj Brucella sp. 09RB8471
|
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
|
Ochrobactrum (4)
|
oan Ochrobactrum anthropi ATCC 49188
oah Ochrobactrum anthropi OAB
ops Ochrobactrum pseudogrignonense
och Ochrobactrum sp. A44
|
3/37
2/37
2/37
2/37
|
Bradyrhizobium (18)
|
bja Bradyrhizobium diazoefficiens USDA 110
bju Bradyrhizobium japonicum USDA 6
bjp Bradyrhizobium japonicum E109
bra Bradyrhizobium sp. ORS 278
bbt Bradyrhizobium sp. BTAi1
brs Bradyrhizobium sp. S23321
aol Bradyrhizobium oligotrophicum
brc Bradyrhizobium sp. CCGE-LA001
brad Bradyrhizobium sp. BF49
bic Bradyrhizobium icense
bro Bradyrhizobium sp. ORS 285
brk Bradyrhizobium sp. SK17
bot Bradyrhizobium ottawaense
brq Bradyrhizobium amphicarpaeae
bgq Bradyrhizobium guangdongense
bgz Bradyrhizobium guangzhouense
bsym Bradyrhizobium symbiodeficiens
bbet Bradyrhizobium betae
|
6/37
4/37
4/37
4/37
8/37
4/37
7/37
10/37
4/37
7/37
2/37
10/37
4/37
4/37
10/37
7/37
4/37
13/37
|
Rhodopseudomonas (7)
|
rpa Rhodopseudomonas palustris CGA009
rpb Rhodopseudomonas palustris HaA2
rpd Rhodopseudomonas palustris BisB5
rpt Rhodopseudomonas palustris TIE-1
rpx Rhodopseudomonas palustris DX-1
|
3/37
4/37
3/37
3/37
6/37
|
Nitrobacter (2)
|
nha Nitrobacter hamburgensis
|
2/37
|
Oligotropha (3)
|
oca Oligotropha carboxidovorans OM5 (Mississippi)
ocg Oligotropha carboxidovorans OM5 (Goettingen)
oco Oligotropha carboxidovorans OM4
|
4/37
4/37
4/37
|
Bosea (5)
|
bop Bosea sp. PAMC 26642
bos Bosea sp. RAC05
bvv Bosea vaviloviae
boi Bosea sp. Tri-49
bof Bosea sp. F3-2
|
3/37
10/37
4/37
10/37
4/37
|
Variibacter (1)
|
vgo Variibacter gotjawalensis
|
4/37
|
Bartonella (24)
|
bapi Bartonella apis
|
4/37
|
Xanthobacter (1)
|
xau Xanthobacter autotrophicus
|
12/37
|
Azorhizobium (1)
|
azc Azorhizobium caulinodans
|
4/37
|
Starkeya (1)
|
sno Starkeya novella
|
4/37
|
Labrys (1)
|
lne Labrys neptuniae
|
10/37
|
Ancylobacter (2)
|
anc Ancylobacter sp. TS-1
apra Ancylobacter pratisalsi
|
3/37
3/37
|
Methylorubrum (6)
|
mea Methylorubrum extorquens AM1
mdi Methylorubrum extorquens DM4
mex Methylorubrum extorquens PA1
mch Methylorubrum extorquens CM4
mpo Methylorubrum populi
mza Methylorubrum zatmanii
|
2/37
3/37
3/37
3/37
3/37
3/37
|
Methylobacterium (14)
|
mrd Methylobacterium radiotolerans
met Methylobacterium sp. 4-46
mno Methylobacterium nodulans
meta Methylobacterium sp. AMS5
maqu Methylobacterium aquaticum
mee Methylobacterium currus
metx Methylobacterium sp. XJLW
mtea Methylobacterium terrae
|
4/37
14/37
10/37
8/37
4/37
10/37
2/37
10/37
|
Microvirga (3)
|
moc Microvirga ossetica
miv Microvirga sp. 17 mud 1-3
mico Microvirga sp. HR1
|
3/37
2/37
2/37
|
Beijerinckia (1)
|
bid Beijerinckia indica
|
2/37
|
Methylocella (2)
|
msl Methylocella silvestris
mtun Methylocella tundrae
|
11/37
9/37
|
Methylovirgula (1)
|
mlg Methylovirgula ligni
|
3/37
|
unclassified Beijerinckiaceae (1)
|
bbar Beijerinckiaceae bacterium RH AL1
|
6/37
|
Chelatococcus (2)
|
chel Chelatococcus sp. CO-6
cdq Chelatococcus daeguensis
|
5/37
2/37
|
Hyphomicrobium (4)
|
hdn Hyphomicrobium denitrificans ATCC 51888
hmc Hyphomicrobium sp. MC1
hni Hyphomicrobium nitrativorans
|
2/37
3/37
2/37
|
Rhodomicrobium (1)
|
Pelagibacterium (1)
|
phl Pelagibacterium halotolerans
|
3/37
|
Filomicrobium (2)
|
fil Candidatus Filomicrobium marinum W
fiy Candidatus Filomicrobium marinum Y
|
2/37
2/37
|
Devosia (3)
|
deq Devosia sp. H5989
dei Devosia sp. I507
dea Devosia ginsengisoli
|
3/37
2/37
3/37
|
Blastochloris (2)
|
Rhodoplanes (1)
|
rhz Rhodoplanes sp. Z2-YC6860
|
16/37
|
Maritalea (1)
|
mmyr Maritalea myrionectae
|
3/37
|
Youhaiella (1)
|
yti Youhaiella tibetensis
|
4/37
|
Methylocystis (5)
|
Methylosinus (1)
|
Pleomorphomonas (1)
|
pleo Pleomorphomonas sp. SM30
|
4/37
|
Martelella (3)
|
mey Martelella endophytica
maad Martelella sp. AD-3
mmed Martelella mediterranea
|
4/37
8/37
6/37
|
Aureimonas (1)
|
aua Aureimonas sp. AU20
|
2/37
|
Breoghania (1)
|
brn Breoghania sp. L-A4
|
3/37
|
Hodgkinia (4)
|
Methyloceanibacter (1)
|
Tokpelaia (1)
|
Pseudorhodoplanes (1)
|
psin Pseudorhodoplanes sinuspersici
|
7/37
|
Hartmannibacter (1)
|
hdi Hartmannibacter diazotrophicus
|
3/37
|
Nordella (1)
|
noh Nordella sp. HKS 07
|
4/37
|
Methyloligella (1)
|
unclassified Rhizobiales (1)
|
rbm Rhizobiales bacterium NRL2
|
2/37
|
Caulobacter (8)
|
ccr Caulobacter vibrioides CB15
ccs Caulobacter vibrioides NA1000
cak Caulobacter sp. K31
cse Caulobacter segnis
cmb Caulobacter mirabilis
cauf Caulobacter sp. FWC26
|
8/37
8/37
4/37
6/37
2/37
2/37
|
Phenylobacterium (2)
|
phb Phenylobacterium sp. HYN0004
|
3/37
|
Brevundimonas (10)
|
bsb Brevundimonas subvibrioides
|
5/37
|
Asticcacaulis (1)
|
unclassified Caulobacteraceae (1)
|
cbot Caulobacteraceae bacterium
|
4/37
|
Ruegeria (4)
|
sil Ruegeria pomeroyi
sit Ruegeria sp. TM1040
rut Ruegeria sp. THAF33
|
3/37
4/37
8/37
|
Epibacterium (1)
|
rmb Epibacterium mobile
|
4/37
|
Rhodobacter (7)
|
rsp Rhodobacter sphaeroides 2.4.1
rsh Rhodobacter sphaeroides ATCC 17029
rsk Rhodobacter sphaeroides KD131
|
2/37
2/37
2/37
|
Jannaschia (1)
|
jan Jannaschia sp. CCS1
|
6/37
|
Roseobacter (3)
|
rpon Roseobacter ponti
|
3/37
|
Paracoccus (13)
|
pde Paracoccus denitrificans
pami Paracoccus aminophilus
pye Paracoccus yeei
pcon Paracoccus contaminans
pzh Paracoccus zhejiangensis
paro Paracoccus sp. BM15
pamn Paracoccus aminovorans
pmut Paracoccus mutanolyticus
pars Paracoccus sp. SC2-6
parr Paracoccus sp. Arc7-R13
pkd Paracoccus kondratievae
ppan Paracoccus pantotrophus
|
9/37
4/37
5/37
9/37
8/37
3/37
3/37
3/37
3/37
2/37
9/37
9/37
|
Dinoroseobacter (1)
|
Ketogulonicigenium (3)
|
kvl Ketogulonicigenium vulgare WSH-001
kvu Ketogulonicigenium vulgare Y25
kro Ketogulonicigenium robustum
|
6/37
6/37
3/37
|
Pseudovibrio (1)
|
psf Pseudovibrio sp. FO-BEG1
|
4/37
|
Phaeobacter (6)
|
pga Phaeobacter inhibens DSM 17395
pgl Phaeobacter inhibens 2.10
pgd Phaeobacter gallaeciensis DSM 26640
php Phaeobacter porticola
ppic Phaeobacter piscinae
phq Phaeobacter sp. LSS9
|
2/37
3/37
3/37
4/37
5/37
3/37
|
Octadecabacter (4)
|
oar Octadecabacter arcticus
oct Octadecabacter sp. SW4
|
4/37
9/37
|
Leisingera (3)
|
lmd Leisingera methylohalidivorans
lej Leisingera sp. NJS204
laqu Leisingera aquaemixtae
|
3/37
5/37
4/37
|
Roseibacterium (1)
|
Planktomarina (1)
|
ptp Planktomarina temperata
|
2/37
|
Celeribacter (4)
|
cid Celeribacter indicus
cmar Celeribacter marinus
ceh Celeribacter ethanolicus
cmag Celeribacter manganoxidans
|
10/37
6/37
15/37
5/37
|
Marinovum (1)
|
Confluentimicrobium (1)
|
con Confluentimicrobium sp. EMB200-NS6
|
11/37
|
Rhodovulum (3)
|
rsu Rhodovulum sulfidophilum
rhm Rhodovulum sp. MB263
|
2/37
2/37
|
Pannonibacter (1)
|
pphr Pannonibacter phragmitetus
|
10/37
|
Halocynthiibacter (1)
|
hat Halocynthiibacter arcticus
|
3/37
|
Labrenzia (5)
|
lap Labrenzia sp. CP4
lagg Labrenzia aggregata
labr Labrenzia sp. VG12
labp Labrenzia sp. PHM005
labt Labrenzia sp. THAF35
|
3/37
6/37
2/37
4/37
6/37
|
Defluviimonas (1)
|
daa Defluviimonas alba
|
6/37
|
Yangia (2)
|
yan Yangia sp. CCB-MM3
ypac Yangia pacifica
|
2/37
2/37
|
Sulfitobacter (6)
|
suam Sulfitobacter sp. AM1-D1
spse Sulfitobacter pseudonitzschiae
sulz Sulfitobacter sp. SK012
suli Sulfitobacter sp. JL08
suld Sulfitobacter sp. D7
sdo Sulfitobacter donghicola
|
7/37
2/37
3/37
3/37
8/37
3/37
|
Donghicola (1)
|
Salipiger (1)
|
Tateyamaria (1)
|
tom Tateyamaria omphalii
|
2/37
|
Pelagibaca (1)
|
paby Pelagibaca abyssi
|
3/37
|
Thioclava (1)
|
thw Thioclava nitratireducens
|
2/37
|
Roseovarius (5)
|
rmm Roseovarius mucosus
rok Roseovarius sp. AK1035
rid Roseovarius indicus
rom Roseovarius sp. MME-070
roh Roseovarius sp. THAF27
|
9/37
9/37
4/37
3/37
2/37
|
Yoonia (1)
|
lvs Yoonia vestfoldensis
|
2/37
|
Antarctobacter (1)
|
aht Antarctobacter heliothermus
|
3/37
|
Rhodobaca (1)
|
rbg Rhodobaca barguzinensis
|
3/37
|
Sagittula (1)
|
sagu Sagittula sp. P11
|
3/37
|
Thalassococcus (1)
|
thaa Thalassococcus sp. S3
|
5/37
|
Gemmobacter (1)
|
geh Gemmobacter sp. HYN0069
|
2/37
|
Tabrizicola (1)
|
taw Tabrizicola piscis
|
2/37
|
Silicimonas (1)
|
salo Silicimonas algicola
|
2/37
|
Sedimentitalea (1)
|
Haematobacter (1)
|
hml Haematobacter massiliensis
|
5/37
|
Boseongicola (1)
|
boo Boseongicola sp. CCM32
|
5/37
|
Pseudorhodobacter (1)
|
Litoreibacter (1)
|
lit Litoreibacter sp. LN3S51
|
3/37
|
Oceanicola (1)
|
ocd Oceanicola sp. D3
|
5/37
|
Maribius (1)
|
Roseivivax (1)
|
rot Roseivivax sp. THAF197b
|
8/37
|
Paraoceanicella (1)
|
ppru Paraoceanicella profunda
|
6/37
|
Stappia (1)
|
siw Stappia indica
|
4/37
|
Pseudohalocynthiibacter (1)
|
Monaibacterium (1)
|
mon Monaibacterium sp. ALG8
|
9/37
|
Mameliella (1)
|
malu Mameliella alba
|
2/37
|
Thalassobius (1)
|
tgl Thalassobius gelatinovorus
|
2/37
|
unclassified Rhodobacteraceae (4)
|
thas Rhodobacteraceae bacterium SH-1
hdh Rhodobacteraceae bacterium RR4-56
|
5/37
3/37
|
Maricaulis (1)
|
Hyphomonas (1)
|
hne Hyphomonas neptunium
|
3/37
|
Hirschia (1)
|
hba Hirschia baltica
|
2/37
|
Glycocaulis (1)
|
gak Glycocaulis alkaliphilus
|
2/37
|
Hyphomonadaceae (1)
|
hbc Hyphomonadaceae bacterium UKL13-1
|
5/37
|
Zymomonas (8)
|
Novosphingobium (10)
|
nar Novosphingobium aromaticivorans
npp Novosphingobium sp. PP1Y
npn Novosphingobium pentaromativorans
nre Novosphingobium resinovorum
nov Novosphingobium sp. P6W
not Novosphingobium sp. THN1
ntd Novosphingobium tardaugens
nor Novosphingobium sp. ABRDHK2
nog Novosphingobium sp. Gsoil 351
|
26/37
25/37
20/37
17/37
8/37
15/37
4/37
10/37
17/37
|
Sphingopyxis (12)
|
sal Sphingopyxis alaskensis
sphk Sphingopyxis fribergensis
smag Sphingopyxis macrogoltabida EY-1
smaz Sphingopyxis macrogoltabida 203
ster Sphingopyxis terrae
sgi Sphingopyxis granuli
sphq Sphingopyxis sp. QXT-31
spho Sphingopyxis sp. MG
sphx Sphingopyxis sp. PAMC25046
sphu Uncultured Sphingopyxis sp. UC10
|
2/37
7/37
12/37
17/37
6/37
12/37
2/37
8/37
2/37
4/37
|
Sphingomonas (18)
|
swi Sphingomonas wittichii
sphd Sphingomonas wittichii DC-6
sphm Sphingomonas sp. MM-1
sphi Sphingomonas hengshuiensis
ssan Sphingomonas sanxanigenens
smy Sphingomonas melonis
span Sphingomonas panacis
skr Sphingomonas koreensis
spkc Sphingomonas sp. KC8
sphc Sphingomonas sp. Cra20
sphf Sphingomonas sp. FARSPH
spha Sphingomonas sp. YZ-8
spau Sphingomonas paucimobilis
|
20/37
15/37
13/37
10/37
8/37
5/37
12/37
3/37
6/37
7/37
4/37
4/37
2/37
|
Sphingobium (16)
|
sjp Sphingobium japonicum
sch Sphingobium chlorophenolicum
ssy Sphingobium sp. SYK-6
syb Sphingobium sp. YBL2
sbd Sphingobium baderi
spmi Sphingobium sp. MI1205
sphb Sphingobium sp. EP60837
sphr Sphingobium sp. RAC03
sinb Sphingobium indicum
spht Sphingobium sp. TKS
shyd Sphingobium hydrophobicum
sya Sphingobium yanoikuyae
spyg Sphingobium sp. YG1
sufl Sphingobium fuliginis
|
14/37
7/37
10/37
15/37
5/37
4/37
6/37
15/37
14/37
13/37
14/37
11/37
5/37
10/37
|
Citromicrobium (1)
|
cij Citromicrobium sp. JL477
|
3/37
|
Sphingorhabdus (3)
|
sfla Sphingorhabdus sp. SMR4y
sphy Sphingorhabdus sp. YGSMI21
|
7/37
21/37
|
Blastomonas (2)
|
blas Blastomonas sp. RAC04
bfw Blastomonas fulva
|
11/37
9/37
|
Rhizorhabdus (1)
|
rdi Rhizorhabdus dicambivorans
|
13/37
|
Sphingosinicella (2)
|
smic Sphingosinicella microcystinivorans
sphs Sphingosinicella sp. BN140058
|
4/37
3/37
|
Tardibacter (1)
|
sphj Tardibacter chloracetimidivorans
|
16/37
|
Sphingosinithalassobacter (1)
|
Hankyongella (1)
|
Parasphingopyxis (1)
|
Erythrobacter (8)
|
elq Erythrobacter litoralis DSM 8509
ery Erythrobacter atlanticus
erk Erythrobacter sp. KY5
|
3/37
19/37
3/37
|
Altererythrobacter (7)
|
aay Altererythrobacter atlanticus
aep Altererythrobacter epoxidivorans
anh Altererythrobacter namhicola
alb Altererythrobacter sp. B11
alh Altererythrobacter sp. BO-6
|
7/37
2/37
4/37
14/37
4/37
|
Croceicoccus (2)
|
cna Croceicoccus naphthovorans
cman Croceicoccus marinus
|
15/37
3/37
|
Porphyrobacter (4)
|
phz Porphyrobacter sp. HT-58-2
|
4/37
|
Gluconobacter (5)
|
Granulobacter (4)
|
Acidiphilium (2)
|
Gluconacetobacter (2)
|
gdi Gluconacetobacter diazotrophicus PA1 5 (Brazil)
gdj Gluconacetobacter diazotrophicus PA1 5 (JGI)
|
2/37
2/37
|
Komagataeibacter (6)
|
ksc Komagataeibacter saccharivorans
|
3/37
|
Acetobacter (19)
|
asz Acetobacter senegalensis
aace Acetobacter aceti
ato Acetobacter tropicalis
aoy Acetobacter oryzoeni
|
3/37
2/37
4/37
2/37
|
Asaia (1)
|
Kozakia (1)
|
Roseomonas (3)
|
rgi Roseomonas gilardii
ros Roseomonas sp. FDAARGOS_362
rmuc Roseomonas mucosa
|
10/37
4/37
10/37
|
Neoasaia (1)
|
Commensalibacter (2)
|
Stella (2)
|
shum Stella humosa
svc Stella vacuolata
|
4/37
4/37
|
Neokomagataea (2)
|
ntn Neokomagataea tanensis
|
2/37
|
Swingsia (2)
|
Bombella (2)
|
Rhodospirillum (3)
|
Pararhodospirillum (1)
|
Magnetospirillum (5)
|
Azospirillum (10)
|
azl Azospirillum sp. B510
ali Azospirillum lipoferum
abs Azospirillum brasilense Sp245
abq Azospirillum brasilense Az39
abf Azospirillum brasilense Sp7
ati Azospirillum thiophilum
ahu Azospirillum humicireducens
azt Azospirillum sp. TSH58
azm Azospirillum ramasamyi
|
15/37
3/37
2/37
2/37
2/37
2/37
2/37
2/37
8/37
|
Tistrella (1)
|
tmo Tistrella mobilis
|
7/37
|
Endolissoclinum (2)
|
Thalassospira (3)
|
txi Thalassospira xiamenensis
|
5/37
|
Magnetospira (1)
|
magq Magnetospira sp. QH-2
|
8/37
|
Haematospirillum (1)
|
Nitrospirillum (1)
|
nao Nitrospirillum amazonense
|
8/37
|
Niveispirillum (1)
|
ncb Niveispirillum cyanobacteriorum
|
10/37
|
Ferrovibrio (1)
|
fer Ferrovibrio terrae
|
2/37
|
Hypericibacter (2)
|
htq Hypericibacter terrae
hadh Hypericibacter adhaerens
|
4/37
4/37
|
Parvularcula (1)
|
Magnetococcus (1)
|
Pelagibacter (3)
|
pel Candidatus Pelagibacter sp. IMCC9063
peg Candidatus Pelagibacter giovannonii
|
2/37
2/37
|
unclassified Pelagibacteraceae (2)
|
Emcibacter (1)
|
ecog Emcibacter congregatus
|
4/37
|
Micavibrio (2)
|
mai Micavibrio aeruginosavorus ARL-13
man Micavibrio aeruginosavorus EPB
|
3/37
3/37
|
Polymorphum (1)
|
pgv Polymorphum gilvum
|
9/37
|
Phreatobacter (2)
|
phr Phreatobacter cathodiphilus
pstg Phreatobacter stygius
|
2/37
6/37
|
Puniceispirillum (1)
|
Oligoflexia (12)
|
Bdellovibrio (8)
|
bbat Bdellovibrio bacteriovorus Tiberius
bbw Bdellovibrio bacteriovorus W
bdq Bdellovibrio sp. qaytius
|
2/37
3/37
2/37
|
Halobacteriovorax (2)
|
Bacteriovorax (1)
|
unclassified Silvanigrellales (1)
|
Other proteobacteria (10)
|
Acidithiobacillus (7)
|
afi Acidithiobacillus ferrivorans
afj Acidithiobacillus ferridurans
|
2/37
2/37
|
Mariprofundus (2)
|
Hydrogenophilus (1)
|
htl Hydrogenophilus thermoluteolus
|
12/37
|
Firmicutes - Bacilli (817)
|
Bacillus (140)
|
bsu Bacillus subtilis subsp. subtilis 168
bsr Bacillus subtilis subsp. subtilis RO-NN-1
bsl Bacillus subtilis subsp. subtilis BSP1
bsh Bacillus subtilis subsp. subtilis 6051-HGW
bsy Bacillus subtilis subsp. subtilis BAB-1
bsut Bacillus subtilis subsp. subtilis AG1839
bsul Bacillus subtilis subsp. subtilis JH642
bsus Bacillus subtilis subsp. subtilis OH 131.1
bss Bacillus subtilis subsp. spizizenii W23
bst Bacillus subtilis subsp. spizizenii TU-B-10
bso Bacillus subtilis subsp. natto BEST195
bsn Bacillus subtilis BSn5
bsq Bacillus subtilis QB928
bsx Bacillus subtilis XF-1
bsp Bacillus subtilis PY79
bli Bacillus licheniformis ATCC 14580
bld Bacillus licheniformis DSM 13 = ATCC 14580
blh Bacillus paralicheniformis
bay Bacillus velezensis FZB42
baq Bacillus velezensis CAU B946
bya Bacillus velezensis YAU B9601-Y2
bamp Bacillus velezensis AS43.3
baml Bacillus velezensis UCMB5036
bama Bacillus velezensis UCMB5033
bamn Bacillus velezensis UCMB5113
bamb Bacillus velezensis NAU-B3
bamt Bacillus velezensis TrigoCor1448
bamy Bacillus velezensis SQR9
bmp Bacillus velezensis JS25R
bao Bacillus amyloliquefaciens DSM 7
baz Bacillus amyloliquefaciens TA208
bql Bacillus amyloliquefaciens LL3
bxh Bacillus amyloliquefaciens XH7
bqy Bacillus amyloliquefaciens Y2
bami Bacillus amyloliquefaciens IT-45
bamc Bacillus amyloliquefaciens CC178
bamf Bacillus amyloliquefaciens LFB112
bsia Bacillus siamensis
bae Bacillus atrophaeus
bvm Bacillus vallismortis
bson Bacillus sonorensis
bht Bacillus halotolerans
bha Bacillus halodurans
ban Bacillus anthracis Ames
bar Bacillus anthracis Ames Ancestor
bat Bacillus anthracis Sterne
bah Bacillus anthracis CDC 684
bai Bacillus anthracis A0248
bax Bacillus anthracis H9401
bant Bacillus anthracis A16
banr Bacillus anthracis A16R
bans Bacillus anthracis SVA11
banh Bacillus anthracis HYU01
banv Bacillus anthracis Vollum
bce Bacillus cereus ATCC 14579
bca Bacillus cereus ATCC 10987
bcz Bacillus cereus E33L
bcr Bacillus cereus AH187
bcb Bacillus cereus B4264
bcu Bacillus cereus AH820
bcg Bacillus cereus G9842
bcq Bacillus cereus Q1
bcx Bacillus cereus 03BB102
bal Bacillus cereus biovar anthracis CI
bnc Bacillus cereus NC7401
bcf Bacillus cereus F837/76
bcer Bacillus cereus FRI-35
bcef Bacillus cereus FT9
bcy Bacillus cytotoxicus
btk Bacillus thuringiensis serovar konkukian 97-27
btl Bacillus thuringiensis Al Hakam
btb Bacillus thuringiensis BMB171
btt Bacillus thuringiensis serovar kurstaki HD73
bthr Bacillus thuringiensis serovar kurstaki YBT-1520
bthi Bacillus thuringiensis serovar kurstaki HD-1
btc Bacillus thuringiensis serovar chinensis CT-43
btf Bacillus thuringiensis serovar finitimus YBT-020
btm Bacillus thuringiensis MC28
btg Bacillus thuringiensis Bt407
bti Bacillus thuringiensis HD-771
btn Bacillus thuringiensis HD-789
btht Bacillus thuringiensis serovar thuringiensis IS5056
bthu Bacillus thuringiensis YBT-1518
btw Bacillus thuringiensis HD1011
bthy Bacillus thuringiensis YWC2-8
bwe Bacillus mycoides KBAB4
bww Bacillus mycoides WSBC 10204
bmyo Bacillus mycoides ATCC 6462
bty Bacillus toyonensis
bmyc Bacillus pseudomycoides 219298
bby Bacillus bombysepticus
bwd Bacillus wiedmannii
btro Bacillus tropicus
bcl Bacillus clausii
bpu Bacillus pumilus SAFR-032
bpum Bacillus pumilus MTCC B6033
bpus Bacillus pumilus SH-B9
bpf Bacillus pseudofirmus
bmq Bacillus megaterium QM B1551
bmd Bacillus megaterium DSM 319
bmh Bacillus megaterium WSH-002
bmeg Bacillus megaterium NBRC 15308 = ATCC 14581
bco Bacillus cellulosilyticus
bck Bacillus coagulans 2-6
bag Bacillus coagulans 36D1
bjs Bacillus sp. JS
baci Bacillus sp. 1NLA3E
bif Bacillus infantis
ble Bacillus lehensis
bmet Bacillus methanolicus
gst Bacillus sp. X1(2014)
bacw Bacillus sp. WP8
bacp Bacillus sp. Pc3
bacb Bacillus sp. BH072
baco Bacillus sp. OxB-1
bacy Bacillus sp. YP1
bacl Bacillus sp. BS34A
balm Bacillus sp. LM 4-2
beo Bacillus filamentosus
bsm Bacillus smithii
bsj Bacillus simplex
bon Bacillus oceanisediminis
bgy Bacillus glycinifermentans
bfx Bacillus flexus
bgi Bacillus gibsonii
bxi Bacillus xiamenensis
bhk Bacillus horikoshii
bkw Bacillus krulwichiae
bbev Bacillus beveridgei
bko Bacillus kochii
balt Bacillus altitudinis
bacs Bacillus sp. SDLI1
bmur Bacillus muralis
bsaf Bacillus safensis
bit Bacillus intestinalis
bacq Bacillus sp. Y1
bcir Bacillus circulans
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9/37
6/37
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Oceanobacillus (3)
|
oih Oceanobacillus iheyensis
ocn Oceanobacillus sp. 160
ocb Oceanobacillus sp. 143
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2/37
10/37
6/37
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Geobacillus (18)
|
gte Geobacillus thermoleovorans CCB_US3_UF5
gtk Geobacillus thermoleovorans KCTC 3570
gtm Geobacillus thermocatenulatus
gtn Geobacillus thermodenitrificans
gyc Geobacillus sp. Y412MC61
gya Geobacillus sp. Y412MC52
gct Geobacillus sp. C56-T3
gmc Geobacillus sp. Y4.1MC1
ggh Geobacillus sp. GHH01
gjf Geobacillus genomosp. 3
gse Geobacillus stearothermophilus
gsr Geobacillus subterraneus
gej Geobacillus sp. JS12
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Parageobacillus (3)
|
gth Parageobacillus thermoglucosidasius C56-YS93
ptl Parageobacillus thermoglucosidasius DSM 2542
ptb Parageobacillus toebii NBRC 107807
|
9/37
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3/37
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Anoxybacillus (6)
|
anm Anoxybacillus sp. B2M1
aamy Anoxybacillus amylolyticus
anl Anoxybacillus sp. B7M1
and Anoxybacillus sp. PDR2
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Amphibacillus (1)
|
axl Amphibacillus xylanus
|
3/37
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Lysinibacillus (8)
|
lsp Lysinibacillus sphaericus
lgy Lysinibacillus varians
lfu Lysinibacillus fusiformis
lys Lysinibacillus sp. YS11
lyb Lysinibacillus sp. B2A1
lyz Lysinibacillus sp. 2017
lyg Lysinibacillus sp. SGAir0095
lpak Lysinibacillus pakistanensis
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Halobacillus (3)
|
hhd Halobacillus halophilus
hmn Halobacillus mangrovi
hli Halobacillus litoralis
|
2/37
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Terribacillus (1)
|
tap Terribacillus goriensis
|
7/37
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Virgibacillus (7)
|
vir Virgibacillus sp. SK37
vhl Virgibacillus halodenitrificans
vig Virgibacillus sp. 6R
vil Virgibacillus phasianinus
vne Virgibacillus necropolis
vpn Virgibacillus dokdonensis
vim Virgibacillus sp. MSP4-1
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2/37
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Lentibacillus (1)
|
lao Lentibacillus amyloliquefaciens
|
10/37
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Fictibacillus (2)
|
fpn Fictibacillus phosphorivorans
far Fictibacillus arsenicus
|
8/37
8/37
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Salimicrobium (1)
|
sje Salimicrobium jeotgali
|
2/37
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Aeribacillus (1)
|
apak Aeribacillus pallidus
|
8/37
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Aquibacillus (1)
|
aqt Aquibacillus sp. TKL69
|
3/37
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Psychrobacillus (2)
|
psyh Psychrobacillus sp. AK 1817
psyo Psychrobacillus glaciei
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3/37
3/37
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Pradoshia (1)
|
prd Pradoshia sp. D12
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8/37
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Gracilibacillus (1)
|
grc Gracilibacillus sp. SCU50
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3/37
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Salicibibacter (2)
|
rue Salicibibacter kimchii
sale Salicibibacter halophilus
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10/37
10/37
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Pontibacillus (1)
|
pof Pontibacillus sp. HMF3514
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2/37
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Sporolactobacillus (1)
|
stea Sporolactobacillus terrae
|
2/37
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unclassified Sporolactobacillaceae (1)
|
bse Bacillus selenitireducens
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3/37
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Staphylococcus (92)
|
sau Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA)
sav Staphylococcus aureus subsp. aureus Mu50 (MRSA/VISA)
saw Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA)
sah Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA)
saj Staphylococcus aureus subsp. aureus JH9 (MRSA/VISA)
sam Staphylococcus aureus subsp. aureus MW2 (CA-MRSA)
sas Staphylococcus aureus subsp. aureus MSSA476 (MSSA)
sar Staphylococcus aureus subsp. aureus MRSA252 (MRSA)
sac Staphylococcus aureus subsp. aureus COL (MRSA)
sax Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA)
saa Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA)
sao Staphylococcus aureus subsp. aureus NCTC8325
sae Staphylococcus aureus subsp. aureus Newman
sad Staphylococcus aureus subsp. aureus ED98
suu Staphylococcus aureus subsp. aureus M013 (CA-MRSA)
suv Staphylococcus aureus subsp. aureus VC40
sue Staphylococcus aureus subsp. aureus ED133
suj Staphylococcus aureus subsp. aureus JKD6159 (CA-MRSA)
suk Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA)
suc Staphylococcus aureus subsp. aureus ECT-R 2 (MSSA)
sut Staphylococcus aureus subsp. aureus T0131 (MRSA)
suq Staphylococcus aureus subsp. aureus TCH60
suz Staphylococcus aureus subsp. aureus 11819-97 (CA-MRSA)
sud Staphylococcus aureus subsp. aureus 71193 (MSSA)
sux Staphylococcus aureus subsp. aureus HO 5096 0412 (MRSA)
suw Staphylococcus aureus subsp. aureus TW20 (MRSA)
sug Staphylococcus aureus subsp. aureus ST398 (MRSA)
suf Staphylococcus aureus subsp. aureus LGA251 (MRSA)
saua Staphylococcus aureus subsp. aureus 55/2053
saue Staphylococcus aureus subsp. aureus 6850 (MSSA)
saun Staphylococcus aureus subsp. aureus CN1 (CA-MRSA)
saus Staphylococcus aureus subsp. aureus SA40 (CA-MRSA)
sauu Staphylococcus aureus subsp. aureus SA957 (CA-MRSA)
saug Staphylococcus aureus subsp. aureus SA268 (CA-MRSA)
sauz Staphylococcus aureus subsp. aureus Z172 (MRSA/VISA)
saut Staphylococcus aureus subsp. aureus ST228/10388 (MRSA)
sauj Staphylococcus aureus subsp. aureus ST228/10497 (MRSA)
sauk Staphylococcus aureus subsp. aureus ST228/15532 (MRSA)
sauq Staphylococcus aureus subsp. aureus ST228/16035 (MRSA)
sauv Staphylococcus aureus subsp. aureus ST228/18412 (MRSA)
sauw Staphylococcus aureus subsp. aureus ST228/16125 (MRSA)
saux Staphylococcus aureus subsp. aureus ST228/18341 (MRSA)
sauy Staphylococcus aureus subsp. aureus ST228/18583 (MRSA)
sauf Staphylococcus aureus subsp. aureus FDAARGOS_5
sab Staphylococcus aureus RF122
suy Staphylococcus aureus 04-02981 (MRSA)
saub Staphylococcus aureus 08BA02176 (LA-MRSA)
saum Staphylococcus aureus M1 (MRSA)
sauc Staphylococcus aureus CA-347 (MRSA)
saur Staphylococcus aureus Bmb9393 (MRSA)
saui Staphylococcus aureus USA300-ISMMS1 (MRSA)
saud Staphylococcus aureus 502A
sams Staphylococcus aureus MS4
suh Staphylococcus argenteus
ser Staphylococcus epidermidis RP62A (MRSE)
sep Staphylococcus epidermidis ATCC 12228
sepp Staphylococcus epidermidis PM221
seps Staphylococcus epidermidis SEI
sha Staphylococcus haemolyticus JCSC1435
shh Staphylococcus haemolyticus Sh29/312/L2
ssp Staphylococcus saprophyticus
sca Staphylococcus carnosus
slg Staphylococcus lugdunensis HKU09-01
sln Staphylococcus lugdunensis N920143
swa Staphylococcus warneri
spas Staphylococcus pasteuri
sxy Staphylococcus xylosus HKUOPL8
sxl Staphylococcus xylosus SMQ-121
sxo Staphylococcus xylosus C2a
shu Staphylococcus hyicus
scap Staphylococcus capitis subsp. capitis
sagq Staphylococcus agnetis
seqo Staphylococcus equorum
ssif Staphylococcus simulans
scv Staphylococcus condimenti
spet Staphylococcus pettenkoferi
scoh Staphylococcus cohnii
sscu Staphylococcus sciuri
snl Staphylococcus nepalensis
skl Staphylococcus kloosii
shom Staphylococcus hominis
smus Staphylococcus muscae
scar Staphylococcus caprae
sff Staphylococcus fleurettii
schr Staphylococcus chromogenes
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Macrococcus (3)
|
mcl Macrococcus caseolyticus
mcak Macrococcus canis
macr Macrococcus sp. IME1552
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Salinicoccus (1)
|
shv Salinicoccus halodurans
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2/37
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Auricoccucs (1)
|
sbac Auricoccus indicus
|
2/37
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Listeria (47)
|
lmo Listeria monocytogenes EGD-e (serotype 1/2a)
lmn Listeria monocytogenes 08-5578 (serotype 1/2a)
lmy Listeria monocytogenes 08-5923 (serotype 1/2a)
lmt Listeria monocytogenes 10403S (serotype 1/2a)
lmoc Listeria monocytogenes SLCC5850 (serotype 1/2a)
lmoe Listeria monocytogenes La111 (serotype 1/2a)
lmob Listeria monocytogenes N53-1 (serotype 1/2a)
lmod Listeria monocytogenes EGD (serotype 1/2a)
lmow Listeria monocytogenes WSLC1001 (serotype 1/2a)
lmoq Listeria monocytogenes 6179 (serotype 1/2a)
lmr Listeria monocytogenes R479a (serotype 1/2a)
lmom Listeria monocytogenes Lm60 (serotype 1/2a)
lmf Listeria monocytogenes F2365 (serotype 4b)
lmc Listeria monocytogenes CLIP 80459 (serotype 4b)
lmog Listeria monocytogenes serotype 4b LL195
lmp Listeria monocytogenes 07PF0776 (serotype 4b)
lmol Listeria monocytogenes L312 (serotype 4b)
lmoj Listeria monocytogenes J1816 (serotype 4b)
lmoz Listeria monocytogenes J1-220 (serotype 4b)
lmox Listeria monocytogenes WSLC1042 (serotype 4b)
lmh Listeria monocytogenes HCC23 (serotype 4a)
lmq Listeria monocytogenes M7 (serotype 4a)
lml Listeria monocytogenes L99 (serotype 4a)
lmg Listeria monocytogenes FSL R2-561
lms Listeria monocytogenes Finland 1998
lmj Listeria monocytogenes J0161
lmw Listeria monocytogenes SLCC2755 (serotype 1/2b)
lmx Listeria monocytogenes SLCC2372 (serotype 1/2c)
lmz Listeria monocytogenes serotype 7 SLCC2482
lmon Listeria monocytogenes SLCC2376 (serotype 4c)
lmos Listeria monocytogenes SLCC7179 (serotype 3a)
lmoo Listeria monocytogenes SLCC2378 (serotype 4e)
lmoy Listeria monocytogenes SLCC2479 (serotype 3c)
lmot Listeria monocytogenes SLCC2540 (serotype 3b)
lmoa Listeria monocytogenes ATCC 19117 (serotype 4d)
lmok Listeria monocytogenes NE dc2014
lmv Listeria monocytogenes CFSAN006122
lin Listeria innocua (serotype 6a)
lwe Listeria welshimeri
lsg Listeria seeligeri
liv Listeria ivanovii subsp. ivanovii PAM 55
lii Listeria ivanovii subsp. ivanovii WSLC 3010
liw Listeria ivanovii WSLC3009
lia Listeria ivanovii subsp. londoniensis WSLC 30167
lio Listeria ivanovii subsp. londoniensis WSLC 30151
lwi Listeria weihenstephanensis
lgz Listeria grayi
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Brochothrix (1)
|
bths Brochothrix thermosphacta
|
3/37
|
Exiguobacterium (5)
|
esi Exiguobacterium sibiricum
eat Exiguobacterium sp. AT1b
ean Exiguobacterium antarcticum
exm Exiguobacterium sp. MH3
exu Exiguobacterium sp. U13-1
|
3/37
3/37
3/37
3/37
3/37
|
Gemella (5)
|
got Gemella sp. oral taxon 928
gmo Gemella morbillorum
geq Gemella sp. ND 6198
gsa Gemella sanguinis
gha Gemella haemolysans
|
2/37
2/37
2/37
2/37
2/37
|
Brevibacillus (5)
|
bbe Brevibacillus brevis
blr Brevibacillus laterosporus
bfm Brevibacillus formosus
brw Brevibacillus sp. 7WMA2
|
6/37
2/37
7/37
2/37
|
Paenibacillus (49)
|
pjd Paenibacillus sp. JDR-2
gym Paenibacillus sp. Y412MC10
ppy Paenibacillus polymyxa E681
ppm Paenibacillus polymyxa SC2
ppo Paenibacillus polymyxa M1
ppol Paenibacillus polymyxa CR1
ppq Paenibacillus polymyxa SQR-21
ppoy Paenibacillus polymyxa Sb3-1
pms Paenibacillus mucilaginosus KNP414
pmq Paenibacillus mucilaginosus 3016
pmw Paenibacillus mucilaginosus K02
pta Paenibacillus terrae
plv Paenibacillus larvae
pbd Paenibacillus borealis
pgm Paenibacillus graminis
pod Paenibacillus odorifer
paen Paenibacillus sp. FSL P4-0081
pste Paenibacillus stellifer
pbj Paenibacillus beijingensis
pih Paenibacillus sp. IHBB 10380
pri Paenibacillus riograndensis
ppeo Paenibacillus peoriae
pnp Paenibacillus naphthalenovorans
pow Paenibacillus sp. 32O-W
pbv Paenibacillus bovis
pxl Paenibacillus xylanexedens
pdh Paenibacillus donghaensis
pib Paenibacillus ihbetae
pcx Paenibacillus crassostreae
pkb Paenibacillus kribbensis
paih Paenibacillus sp. IHB B 3084
pvo Paenibacillus vortex
plw Paenibacillus lautus
plen Paenibacillus lentus
ppsc Paenibacillus psychroresistens
plut Paenibacillus lutimineralis
palb Paenibacillus albus
pchi Paenibacillus chitinolyticus
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15/37
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4/37
4/37
3/37
4/37
2/37
3/37
3/37
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Thermobacillus (1)
|
tco Thermobacillus composti
|
3/37
|
Aneurinibacillus (2)
|
anx Aneurinibacillus sp. XH2
asoc Aneurinibacillus soli
|
7/37
8/37
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Cohnella (2)
|
coh Cohnella candidum
cohn Cohnella sp. HS21
|
8/37
7/37
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Saccharibacillus (1)
|
saca Saccharibacillus brassicae
|
2/37
|
Alicyclobacillus (2)
|
aac Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
aad Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
|
8/37
9/37
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Kyrpidia (2)
|
bts Kyrpidia tusciae
kyr Kyrpidia spormannii
|
10/37
10/37
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Tumebacillus (2)
|
Solibacillus (3)
|
siv Solibacillus silvestris StLB046
ssil Solibacillus silvestris DSM 12223
sob Solibacillus sp. R5-41
|
11/37
11/37
12/37
|
Planococcus (11)
|
pln Planococcus sp. PAMC 21323
pku Planococcus kocurii
prt Planococcus rifietoensis
pll Planococcus versutus
pdg Planococcus donghaensis
phc Planococcus halocryophilus
pmar Planococcus sp. Y42
ppla Planococcus plakortidis
pfae Planococcus faecalis
plx Planococcus sp. MB-3u-03
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7/37
4/37
3/37
4/37
|
Jeotgalibacillus (1)
|
jeo Jeotgalibacillus malaysiensis
|
3/37
|
Kurthia (2)
|
kur Kurthia sp. 11kri321
kzo Kurthia zopfii
|
4/37
6/37
|
Sporosarcina (6)
|
spsy Sporosarcina psychrophila
spor Sporosarcina sp. P33
spop Sporosarcina sp. P37
sure Sporosarcina ureae
spae Sporosarcina pasteurii
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13/37
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Rummeliibacillus (1)
|
rst Rummeliibacillus stabekisii
|
6/37
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Paenisporosarcina (2)
|
paek Paenisporosarcina sp. K2R23-3
panc Paenisporosarcina antarctica
|
3/37
3/37
|
Planomicrobium (2)
|
pgq Planomicrobium glaciei
play Planomicrobium sp. Y50
|
4/37
7/37
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Novibacillus (1)
|
ntr Novibacillus thermophilus
|
2/37
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Laceyella (1)
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Thermoactinomyces (1)
|
Kroppenstedtia (2)
|
kpul Kroppenstedtia pulmonis
keb Kroppenstedtia eburnea
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5/37
3/37
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Lactococcus (19)
|
llk Lactococcus lactis subsp. lactis KF147
llx Lactococcus lactis subsp. lactis NCDO 2118
llm Lactococcus lactis subsp. cremoris MG1363
llc Lactococcus lactis subsp. cremoris SK11
llr Lactococcus lactis subsp. cremoris A76
lln Lactococcus lactis subsp. cremoris NZ9000
llw Lactococcus lactis subsp. cremoris KW2
llj Lactococcus lactis AI06
lgr Lactococcus garvieae ATCC 49156
lgv Lactococcus garvieae Lg2
lpk Lactococcus piscium
lrn Lactococcus raffinolactis
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4/37
3/37
|
Streptococcus (149)
|
spy Streptococcus pyogenes M1 GAS (serotype M1)
spz Streptococcus pyogenes MGAS5005 (serotype M1)
spym Streptococcus pyogenes M1 476 (serotype M1)
spya Streptococcus pyogenes A20 (serotype M1)
spg Streptococcus pyogenes MGAS315 (serotype M3)
sps Streptococcus pyogenes SSI-1 (serotype M3)
sph Streptococcus pyogenes MGAS10270 (serotype M2)
spi Streptococcus pyogenes MGAS10750 (serotype M4)
spj Streptococcus pyogenes MGAS2096 (serotype M12)
spk Streptococcus pyogenes MGAS9429 (serotype M12)
spa Streptococcus pyogenes MGAS10394 (serotype M6)
spb Streptococcus pyogenes MGAS6180 (serotype M28)
stg Streptococcus pyogenes MGAS15252 (serotype M59)
stx Streptococcus pyogenes MGAS1882 (serotype M59)
soz Streptococcus pyogenes NZ131 (serotype M49)
stz Streptococcus pyogenes Alab49 (serotype M53)
spyh Streptococcus pyogenes HSC5 (serotype M14)
spn Streptococcus pneumoniae TIGR4 (virulent serotype 4)
spd Streptococcus pneumoniae D39 (virulent serotype 2)
spr Streptococcus pneumoniae R6 (avirulent serotype 2)
spw Streptococcus pneumoniae CGSP14 (serotype 14)
sjj Streptococcus pneumoniae JJA (serotype 14)
snv Streptococcus pneumoniae INV200 (serotype 14)
spx Streptococcus pneumoniae G54 (serotype 19F)
snt Streptococcus pneumoniae Taiwan19F-14 (serotype 19F)
snd Streptococcus pneumoniae ST556 (serotype 19F)
spnn Streptococcus pneumoniae A026 (serotype 19F)
sne Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage)
spv Streptococcus pneumoniae Hungary19A 6 (serotype 19A)
snc Streptococcus pneumoniae TCH8431/19A (serotype 19A)
snm Streptococcus pneumoniae 70585 (serotype 5)
spp Streptococcus pneumoniae P1031 (serotype 1)
sni Streptococcus pneumoniae INV104 (serotype 1)
spng Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
snb Streptococcus pneumoniae 670-6B (serotype 6B)
snp Streptococcus pneumoniae AP200 (serotype 11A)
snx Streptococcus pneumoniae OXC141 (serotype 3)
snu Streptococcus pneumoniae SPNA45 (serotype 3)
spne Streptococcus pneumoniae SPN034156 (serotype 3)
spnu Streptococcus pneumoniae SPN034183 (serotype 3)
spnm Streptococcus pneumoniae SPN994038 (serotype 3)
spno Streptococcus pneumoniae SPN994039 (serotype 3)
sag Streptococcus agalactiae 2603 (serotype V)
san Streptococcus agalactiae NEM316 (serotype III)
sak Streptococcus agalactiae A909 (serotype Ia)
sgc Streptococcus agalactiae GD201008-001 (serotype Ia)
sags Streptococcus agalactiae SA20
sagl Streptococcus agalactiae 2-22 (serotype Ib)
sagm Streptococcus agalactiae 09mas018883
sagi Streptococcus agalactiae ILRI005
sagr Streptococcus agalactiae ILRI112
sagp Streptococcus agalactiae 138P
sagc Streptococcus agalactiae 138spar
sagt Streptococcus agalactiae COH1
sage Streptococcus agalactiae NGBS061
sagg Streptococcus agalactiae NGBS572
sagn Streptococcus agalactiae CNCTC 10/84
stc Streptococcus thermophilus CNRZ1066
stl Streptococcus thermophilus LMG 18311
ste Streptococcus thermophilus LMD-9
stn Streptococcus thermophilus ND03
stu Streptococcus thermophilus JIM 8232
stw Streptococcus thermophilus MN-ZLW-002
sthe Streptococcus thermophilus ASCC 1275
ssa Streptococcus sanguinis
ssk Streptococcus suis D12 (serotype 9)
srp Streptococcus suis ST1 (serotype 1)
ssut Streptococcus suis TL13 (serotype 16)
sub Streptococcus uberis
sdg Streptococcus dysgalactiae subsp. equisimilis ATCC 12394
sda Streptococcus dysgalactiae subsp. equisimilis RE378
sdc Streptococcus dysgalactiae subsp. equisimilis AC-2713
sdq Streptococcus dysgalactiae subsp. equisimilis 167
sor Streptococcus oralis
stk Streptococcus parauberis
ssr Streptococcus salivarius CCHSS3
stf Streptococcus salivarius 57.I
stj Streptococcus salivarius JIM8777
strs Streptococcus salivarius NCTC 8618
ssah Streptococcus salivarius HSISS4
std Streptococcus pseudopneumoniae
sig Streptococcus sp. I-G2
sip Streptococcus sp. I-P16
stv Streptococcus sp. VT 162
stra Streptococcus sp. A12
strn Streptococcus sp. NPS 308
ssob Streptococcus sobrinus
seqi Streptococcus equinus
ski Streptococcus koreensis
|
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|
Lactobacillus (101)
|
lpl Lactobacillus plantarum WCFS1
lpj Lactobacillus plantarum JDM1
lpt Lactobacillus plantarum ZJ316
lps Lactobacillus plantarum subsp. plantarum ST-III
lpr Lactobacillus plantarum subsp. plantarum P-8
lpz Lactobacillus plantarum 16
lpb Lactobacillus plantarum B21
lsa Lactobacillus sakei
lsl Lactobacillus salivarius UCC118
lsi Lactobacillus salivarius CECT 5713
lsj Lactobacillus salivarius JCM1046
lbr Lactobacillus brevis ATCC 367
lbk Lactobacillus brevis KB290
lca Lactobacillus paracasei ATCC 334
lcz Lactobacillus paracasei Zhang
lcs Lactobacillus paracasei BD-II
lce Lactobacillus paracasei LC2W
lcl Lactobacillus paracasei LOCK919
lpq Lactobacillus paracasei N1115
lpi Lactobacillus paracasei subsp. paracasei 8700:2
lpap Lactobacillus paracasei subsp. paracasei JCM 8130
lcb Lactobacillus casei BL23
lcw Lactobacillus casei W56
lcx Lactobacillus casei 12A
lre Lactobacillus reuteri DSM 20016
lrf Lactobacillus reuteri JCM 1112
lru Lactobacillus reuteri SD2112
lrr Lactobacillus reuteri TD1
lfe Lactobacillus fermentum IFO 3956
lfr Lactobacillus fermentum CECT 5716
lff Lactobacillus fermentum F-6
lrh Lactobacillus rhamnosus GG
lrg Lactobacillus rhamnosus GG
lrl Lactobacillus rhamnosus Lc 705
lra Lactobacillus rhamnosus ATCC 8530
lro Lactobacillus rhamnosus LOCK900
lrc Lactobacillus rhamnosus LOCK908
lam Lactobacillus amylovorus GRL 1112
lai Lactobacillus amylovorus 30SC
lbh Lactobacillus buchneri NRRL B-30929
lbn Lactobacillus buchneri CD034
lke Lactobacillus kefiranofaciens
lho Lactobacillus hokkaidonensis
lmu Lactobacillus mucosae
lgn Lactobacillus ginsenosidimutans
lko Lactobacillus koreensis
lpx Lactobacillus paraplantarum
lor Lactobacillus oris
lpar Lactobacillus parabuchneri
lpd Lactobacillus paracollinoides
lcu Lactobacillus curieae
lct Lactobacillus crustorum
lcv Lactobacillus curvatus
lamy Lactobacillus amylolyticus
lagl Lactobacillus agilis
lzy Lactobacillus zymae
lpg Lactobacillus pentosus
laca Lactobacillus acidipiscis
lalw Lactobacillus allii
lali Lactobacillus alimentarius
lfm Lactobacillus farciminis
lng Lactobacillus nagelii
ldx Lactobacillus dextrinicus
lbm Lactobacillus bombi
lji Lactobacillus jinshani
lhw Lactobacillus hordei
|
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5/37
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|
Pediococcus (6)
|
ppe Pediococcus pentosaceus ATCC 25745
ppen Pediococcus pentosaceus SL4
paci Pediococcus acidilactici
|
4/37
4/37
4/37
|
Enterococcus (23)
|
efa Enterococcus faecalis V583
efl Enterococcus faecalis 62
efi Enterococcus faecalis OG1RF
efd Enterococcus faecalis D32
efs Enterococcus faecalis Symbioflor 1
efn Enterococcus faecalis DENG1
efq Enterococcus faecalis ATCC 29212
ene Enterococcus faecalis 7L76
efc Enterococcus faecium Aus0004
efau Enterococcus faecium Aus0085
efu Enterococcus faecium DO
efm Enterococcus faecium ATCC 8459 = NRRL B-2354
eft Enterococcus faecium T110
ehr Enterococcus hirae
ecas Enterococcus casseliflavus
emu Enterococcus mundtii
edu Enterococcus durans
ega Enterococcus gallinarum
ess Enterococcus silesiacus
eth Enterococcus thailandicus
egv Enterococcus gilvus
eav Enterococcus avium
esg Enterococcus saigonensis
|
3/37
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4/37
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6/37
6/37
3/37
|
Melissococcus (2)
|
mps Melissococcus plutonius ATCC 35311
mpx Melissococcus plutonius DAT561
|
2/37
2/37
|
Tetragenococcus (4)
|
thl Tetragenococcus halophilus NBRC 12172
tey Tetragenococcus halophilus YJ1
too Tetragenococcus osmophilus
tkr Tetragenococcus koreensis
|
2/37
3/37
3/37
2/37
|
Vagococcus (5)
|
vte Vagococcus teuberi
vpi Vagococcus penaei
vac Vagococcus sp. CF-49
vao Vagococcus sp. MN-17
vah Vagococcus sp. HDW17A
|
3/37
3/37
3/37
3/37
3/37
|
Oenococcus (3)
|
osi Oenococcus sicerae
|
4/37
|
Leuconostoc (13)
|
lki Leuconostoc kimchii
lec Leuconostoc sp. C2
llf Leuconostoc lactis
lgc Leuconostoc garlicum
lpse Leuconostoc pseudomesenteroides
|
4/37
4/37
3/37
3/37
4/37
|
Weissella (11)
|
wjo Weissella jogaejeotgali
wpa Weissella paramesenteroides
wso Weissella soli
whe Weissella hellenica
|
3/37
3/37
4/37
3/37
|
Aerococcus (7)
|
aui Aerococcus urinaeequi
asan Aerococcus sanguinicola
avs Aerococcus viridans
auh Aerococcus urinaehominis
|
3/37
2/37
3/37
2/37
|
Abiotrophia (1)
|
adc Abiotrophia defectiva
|
3/37
|
unclassified Aerococcaceae (1)
|
abae Suicoccus acidiformans
|
3/37
|
Carnobacterium (6)
|
crn Carnobacterium sp. 17-4
cml Carnobacterium maltaromaticum
caw Carnobacterium inhibens
carc Carnobacterium sp. CP1
carn Carnobacterium sp. PL17GRE32
|
4/37
3/37
3/37
4/37
3/37
|
Marinilactibacillus (1)
|
marr Marinilactibacillus sp. 15R
|
3/37
|
Jeotgalibaca (5)
|
jep Jeotgalibaca sp. PTS2502
jeh Jeotgalibaca ciconiae
jar Jeotgalibaca arthritidis
jpo Jeotgalibaca porci
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3/37
2/37
3/37
3/37
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Dolosigranulum (1)
|
Firmicutes - Clostridia (231)
|
Clostridium (54)
|
clj Clostridium ljungdahlii
cls Clostridium sp. SY8519
clb Clostridium sp. BNL1100
cpas Clostridium pasteurianum BC1
cah Clostridium autoethanogenum
csq Clostridium scatologenes
cace Clostridium aceticum
cck Clostridium carboxidivorans
cfm Clostridium formicaceticum
cdrk Clostridium drakei
cdy Clostridium diolis
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Alkaliphilus (2)
|
amt Alkaliphilus metalliredigens
|
2/37
|
Arthromitus (4)
|
Geosporobacter (1)
|
gfe Geosporobacter ferrireducens
|
3/37
|
Hathewaya (1)
|
Caloramator (1)
|
Crassaminicella (1)
|
Caloranaerobacter (1)
|
Mageeibacillus (1)
|
Fastidiosipila (1)
|
Hungateiclostridium (4)
|
ccl Hungateiclostridium clariflavum
|
2/37
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unclassified Hungateiclostridiaceae (1)
|
Ruminiclostridium (1)
|
Thermoclostridium (2)
|
Pseudoclostridium (1)
|
unclassified Ruminococcaceae (4)
|
Flavonifractor (1)
|
fpla Flavonifractor plautii
|
3/37
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Ethanoligenens (1)
|
Ruminococcus (5)
|
Faecalibacterium (2)
|
Caproiciproducens (1)
|
Butyrivibrio (3)
|
Cellulosilyticum (2)
|
Roseburia (3)
|
Coprococcus (2)
|
Blautia (6)
|
Lachnoclostridium (3)
|
lacy Lachnoclostridium sp. YL32
|
4/37
|
Lacrimispora (2)
|
cso Clostridium cf. saccharolyticum K10
|
2/37
|
Anaerostipes (2)
|
Herbinix (1)
|
Anaerotignum (1)
|
Lachnoanaerobaculum (1)
|
Anaerobutyricum (1)
|
Pseudobutyrivibrio (1)
|
Anaerocolumna (1)
|
Lachnospira (1)
|
Mediterraneibacter (1)
|
Enterocloster (1)
|
cbol Enterocloster bolteae
|
4/37
|
unclassified Lachnospiraceae (4)
|
Clostridioides (5)
|
Peptoclostridium (1)
|
Acetoanaerobium (1)
|
Filifactor (1)
|
Paeniclostridium (1)
|
Romboutsia (1)
|
Peptacetobacter (1)
|
unclassified Peptostreptococcaceae (1)
|
Symbiobacterium (1)
|
Syntrophomonas (1)
|
Syntrophothermus (1)
|
Syntrophocurvum (1)
|
Desulfitobacterium (5)
|
dhd Desulfitobacterium hafniense DCB-2
|
4/37
|
Desulfotomaculum (4)
|
dca Desulfotomaculum nigrificans
|
5/37
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Desulfofarcimen (1)
|
Desulfofundulus (1)
|
dku Desulfofundulus kuznetsovii
|
4/37
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Desulfallas (1)
|
dgi Desulfallas gibsoniae
|
4/37
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Pelotomaculum (1)
|
pth Pelotomaculum thermopropionicum
|
4/37
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Desulforudis (1)
|
Thermincola (1)
|
Syntrophobotulus (1)
|
Desulfosporosinus (3)
|
dor Desulfosporosinus orientis
|
4/37
|
Dehalobacter (3)
|
ded Dehalobacter sp. DCA
dec Dehalobacter sp. CF
drs Dehalobacter restrictus
|
2/37
2/37
2/37
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Heliobacterium (1)
|
Heliorestis (1)
|
Eubacterium (3)
|
Acetobacterium (1)
|
Oscillibacter (1)
|
Dysosmobacter (1)
|
Thermaerobacter (3)
|
tmr Thermaerobacter marianensis
thef Thermaerobacter sp. FW80
thep Thermaerobacter sp. PB12/4term
|
7/37
2/37
2/37
|
Sulfobacillus (3)
|
say Sulfobacillus acidophilus TPY
sap Sulfobacillus acidophilus DSM 10332
sthr Sulfobacillus thermotolerans
|
9/37
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2/37
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Carboxydocella (1)
|
Christensenella (1)
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Intestinimonas (1)
|
Mogibacterium (1)
|
Aminipila (3)
|
unclassified Clostridiales (4)
|
Caldanaerobacter (1)
|
Thermoanaerobacter (8)
|
Carboxydothermus (1)
|
chy Carboxydothermus hydrogenoformans
|
4/37
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Tepidanaerobacter (2)
|
Moorella (3)
|
mta Moorella thermoacetica ATCC 39073
mtho Moorella thermoacetica DSM 521
mthz Moorella thermoacetica DSM 2955
|
3/37
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5/37
|
Ammonifex (1)
|
Thermacetogenium (1)
|
Caldicellulosiruptor (9)
|
Thermosediminibacter (1)
|
toc Thermosediminibacter oceani
|
4/37
|
Thermoanaerobacterium (4)
|
Thermodesulfobium (2)
|
Mahella (1)
|
Natranaerobius (1)
|
Halothermothrix (1)
|
Halanaerobium (2)
|
Halocella (1)
|
Acetohalobium (1)
|
Halobacteroides (1)
|
Anoxybacter (1)
|
Firmicutes - Others (46)
|
Finegoldia (1)
|
Anaerococcus (1)
|
Parvimonas (1)
|
Peptoniphilus (3)
|
Gottschalkia (1)
|
Sporanaerobacter (1)
|
spoa Sporanaerobacter sp. NJN-17
|
3/37
|
Veillonella (4)
|
Megasphaera (3)
|
mhw Megasphaera hexanoica
|
2/37
|
Dialister (2)
|
Selenomonas (5)
|
Megamonas (2)
|
Pelosinus (2)
|
Methylomusa (1)
|
Sporomusa (1)
|
sted Sporomusa termitida
|
6/37
|
Acidaminococcus (2)
|
Phascolarctobacterium (1)
|
Erysipelothrix (5)
|
erh Erysipelothrix rhusiopathiae Fujisawa
ers Erysipelothrix rhusiopathiae SY1027
erl Erysipelothrix larvae
eri Erysipelothrix sp. 15TAL0474
erd Erysipelothrix sp. HDW6C
|
2/37
2/37
5/37
2/37
2/37
|
Faecalitalea (1)
|
Turicibacter (2)
|
Faecalibaculum (1)
|
Absiella (2)
|
Erysipelatoclostridium (1)
|
unclassified Erysipelotrichaceae (2)
|
Limnochorda (1)
|
lpil Limnochorda pilosa
|
7/37
|
Tenericutes (160)
|
Mycoplasma (99)
|
Ureaplasma (4)
|
Hepatoplasma (1)
|
Phytoplasma (8)
|
Acholeplasma (6)
|
acl Acholeplasma laidlawii
abra Acholeplasma brassicae
apal Acholeplasma palmae
aoc Acholeplasma oculi
aaxa Acholeplasma axanthum
ahk Acholeplasma hippikon
|
2/37
2/37
2/37
2/37
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2/37
|
Mesoplasma (8)
|
Entomoplasma (4)
|
Spiroplasma (27)
|
Izimaplasma (1)
|
unclassified Tenericutes (2)
|
tbm Tenericutes bacterium MO-XQ
tbz Tenericutes bacterium MZ-XQ
|
2/37
2/37
|
Actinobacteria (752)
|
Mycobacterium (73)
|
mtu Mycobacterium tuberculosis H37Rv
mtv Mycobacterium tuberculosis H37Rv
mtc Mycobacterium tuberculosis CDC1551
mra Mycobacterium tuberculosis H37Ra
mtf Mycobacterium tuberculosis F11
mtb Mycobacterium tuberculosis KZN 1435
mtk Mycobacterium tuberculosis KZN 4207
mtz Mycobacterium tuberculosis KZN 605
mtg Mycobacterium tuberculosis RGTB327
mti Mycobacterium tuberculosis RGTB423
mte Mycobacterium tuberculosis CCDC5079
mtur Mycobacterium tuberculosis CCDC5079
mtl Mycobacterium tuberculosis CCDC5180
mto Mycobacterium tuberculosis CTRI-2
mtd Mycobacterium tuberculosis UT205
mtn Mycobacterium tuberculosis Erdman = ATCC 35801
mtj Mycobacterium tuberculosis Beijing/NITR203
mtub Mycobacterium tuberculosis 7199-99
mtuc Mycobacterium tuberculosis CAS/NITR204
mtue Mycobacterium tuberculosis EAI5/NITR206
mtx Mycobacterium tuberculosis EAI5
mtuh Mycobacterium tuberculosis Haarlem/NITR202
mtul Mycobacterium tuberculosis Haarlem
mtut Mycobacterium tuberculosis BT1
mtuu Mycobacterium tuberculosis BT2
mtq Mycobacterium tuberculosis HKBS1
mbo Mycobacterium tuberculosis variant bovis AF2122/97
mbb Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
mbt Mycobacterium tuberculosis variant bovis BCG Tokyo 172
mbm Mycobacterium tuberculosis variant bovis BCG Mexico
mbk Mycobacterium tuberculosis variant bovis BCG Korea 1168P
mbx Mycobacterium tuberculosis variant bovis BCG ATCC 35743
maf Mycobacterium tuberculosis variant africanum
mmic Mycobacterium tuberculosis variant microti
mce Mycobacterium canettii CIPT 140010059
mcq Mycobacterium canettii CIPT 140060008
mcv Mycobacterium canettii CIPT 140070008
mcx Mycobacterium canettii CIPT 140070010
mcz Mycobacterium canettii CIPT 140070017
mpa Mycobacterium avium subsp. paratuberculosis K-10
mao Mycobacterium avium subsp. paratuberculosis MAP4
mavi Mycobacterium avium subsp. paratuberculosis E1
mavu Mycobacterium avium subsp. paratuberculosis E93
mav Mycobacterium avium 104
mit Mycobacterium intracellulare MOTT-02
mia Mycobacterium intracellulare ATCC 13950
mid Mycobacterium intracellulare subsp. intracellulare
myo Mycobacterium intracellulare subsp. yongonense
mir Mycobacterium paraintracellulare
mchi Mycobacterium chimaera
mmal Mycobacterium marseillense
mlp Mycobacterium lepraemurium
msa Mycobacterium sp. JS623
mul Mycobacterium ulcerans
mmc Mycobacterium sp. MCS
mkm Mycobacterium sp. KMS
mjl Mycobacterium sp. JLS
mmi Mycobacterium marinum M
mmae Mycobacterium marinum E11
mmm Mycobacterium sp. MOTT36Y
mli Mycobacterium liflandii
mkn Mycobacterium kansasii ATCC 12478
myv Mycobacterium sp. VKM Ac-1817D
mye Mycobacterium sp. EPa45
mhad Mycobacterium haemophilum
myn Mycobacterium sp. NRRL B-3805
mdx Mycobacterium dioxanotrophicus
mshg Mycobacterium shigaense
mfj Mycobacterium florentinum
mgro Mycobacterium grossiae
mxe Mycobacterium xenopi
|
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2/37
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3/37
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6/37
4/37
|
Mycolicibacterium (21)
|
msm Mycolicibacterium smegmatis MC2 155
msg Mycolicibacterium smegmatis MC2 155
msb Mycolicibacterium smegmatis MC2 155
msn Mycolicibacterium smegmatis INHR1
msh Mycolicibacterium smegmatis INHR2
mva Mycolicibacterium vanbaalenii
mgi Mycolicibacterium gilvum PYR-GCK
msp Mycolicibacterium gilvum Spyr1
mcb Mycolicibacterium chubuense
mne Mycolicibacterium neoaurum
mgo Mycolicibacterium goodii
mft Mycolicibacterium fortuitum
mphl Mycolicibacterium phlei
mvq Mycolicibacterium vaccae
mll Mycolicibacterium litorale
mrh Mycolicibacterium rhodesiae
mthn Mycolicibacterium thermoresistibile
mhas Mycolicibacterium hassiacum
mdu Mycolicibacterium duvalii
mcht Mycolicibacterium chitae
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3/37
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8/37
7/37
9/37
|
Mycobacteroides (9)
|
mab Mycobacteroides abscessus ATCC 19977
mmv Mycobacteroides abscessus subsp. massiliense GO 06
mabb Mycobacteroides abscessus subsp. bolletii 50594
mabl Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
mche Mycobacteroides chelonae
miz Mycobacteroides immunogenum
mste Mycobacterium stephanolepidis
msao Mycobacteroides saopaulense
msal Mycobacteroides salmoniphilum
|
6/37
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6/37
6/37
6/37
11/37
6/37
6/37
6/37
|
Mycolicibacter (3)
|
mjd Mycolicibacter sinensis
mter Mycolicibacter terrae
mmin Mycolicibacter minnesotensis
|
3/37
6/37
4/37
|
Hoyosella (1)
|
asd Hoyosella subflava
|
7/37
|
Mycolicibacillus (1)
|
mkr Mycolicibacillus koreensis
|
6/37
|
Corynebacterium (100)
|
cgl Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko)
cgb Corynebacterium glutamicum ATCC 13032 (Bielefeld)
cgu Corynebacterium glutamicum K051
cgt Corynebacterium glutamicum R
cgs Corynebacterium glutamicum SCgG1
cgg Corynebacterium glutamicum SCgG2
cgm Corynebacterium glutamicum MB001
cgj Corynebacterium glutamicum ATCC 21831
cgq Corynebacterium glutamicum AR1
cgx Corynebacterium glutamicum B253
cef Corynebacterium efficiens
cdr Corynebacterium diphtheriae HC03
chn Corynebacterium halotolerans
ccn Corynebacterium callunae
cter Corynebacterium terpenotabidum
cmd Corynebacterium maris
caz Corynebacterium argentoratense
ccg Corynebacterium casei
cgy Corynebacterium glyciniphilum
cax Corynebacterium atypicum
cii Corynebacterium imitans
chm Corynebacterium humireducens
cmq Corynebacterium marinum
cmv Corynebacterium mustelae
cei Corynebacterium epidermidicanis
cted Corynebacterium testudinoris
cdx Corynebacterium deserti
csp Corynebacterium simulans
csta Corynebacterium stationis
ccjz Corynebacterium crudilactis
cpho Corynebacterium phocae
cfc Corynebacterium flavescens
cstr Corynebacterium striatum
caqu Corynebacterium aquilae
camg Corynebacterium ammoniagenes
cmin Corynebacterium minutissimum
cpeg Corynebacterium pelargi
cee Corynebacterium endometrii
csan Corynebacterium sanguinis
bfv Brevibacterium flavum
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11/37
|
Nocardia (10)
|
nfa Nocardia farcinica IFM 10152
nfr Nocardia farcinica NCTC11134
ncy Nocardia cyriacigeorgica
nbr Nocardia brasiliensis
nno Nocardia nova
nsl Nocardia mangyaensis
nsr Nocardia seriolae
ntp Nocardia terpenica
noz Nocardia sp. CS682
nod Nocardia otitidiscaviarum
|
14/37
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4/37
4/37
|
Rhodococcus (21)
|
rha Rhodococcus jostii
rer Rhodococcus erythropolis PR4
rey Rhodococcus erythropolis CCM2595
reb Rhodococcus erythropolis BG43
rop Rhodococcus opacus B4
roa Rhodococcus opacus PD630
req Rhodococcus hoagii
rpy Rhodococcus pyridinivorans
rhb Rhodococcus sp. B7740
rav Rhodococcus aetherivorans
rfa Rhodococcus fascians
rhw Rhodococcus sp. WMMA185
rhs Rhodococcus sp. PBTS 2
rrz Rhodococcus ruber
rhu Rhodococcus sp. PBTS 1
rqi Rhodococcus qingshengii
rhq Rhodococcus sp. p52
rhod Rhodococcus sp. 008
rrt Rhodococcus rhodochrous
rby Rhodococcus biphenylivorans
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21/37
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7/37
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4/37
17/37
17/37
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17/37
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Gordonia (11)
|
gbr Gordonia bronchialis
gpo Gordonia polyisoprenivorans
gor Gordonia sp. KTR9
goq Gordonia phthalatica
gta Gordonia terrae
goc Gordonia sp. YC-JH1
git Gordonia iterans
gru Gordonia rubripertincta
gom Gordonia insulae
gav Gordonia alkanivorans
god Gordonia sp. 135
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14/37
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4/37
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16/37
7/37
7/37
|
Tsukamurella (2)
|
tpr Tsukamurella paurometabola
tsm Tsukamurella tyrosinosolvens
|
6/37
9/37
|
Segniliparus (1)
|
Dietzia (5)
|
dtm Dietzia timorensis
dit Dietzia sp. oral taxon 368
diz Dietzia sp. JS16-p6b
dpc Dietzia psychralcaliphila
dlu Dietzia lutea
|
10/37
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15/37
|
Lawsonella (1)
|
Tomitella (1)
|
toy Tomitella sp. HY188
|
6/37
|
Streptomyces (71)
|
sco Streptomyces coelicolor
sma Streptomyces avermitilis
sgr Streptomyces griseus
sgb Streptomyces globisporus
scb Streptomyces scabiei
ssx Streptomyces sp. SirexAA-E
svl Streptomyces violaceusniger
sct Streptomyces cattleya NRRL 8057 = DSM 46488
scy Streptomyces cattleya NRRL 8057 = DSM 46488
sfa Streptomyces pratensis
sbh Streptomyces bingchenggensis
shy Streptomyces hygroscopicus subsp. jinggangensis 5008
sho Streptomyces hygroscopicus subsp. jinggangensis TL01
sve Streptomyces venezuelae
sdv Streptomyces davaonensis
sals Streptomyces albus DSM 41398
strp Streptomyces sp. PAMC 26508
sfi Streptomyces fulvissimus
src Streptomyces rapamycinicus
salu Streptomyces albulus NK660
sall Streptomyces albulus ZPM
slv Streptomyces lividans
sgu Streptomyces glaucescens
svt Streptomyces vietnamensis
stre Streptomyces sp. 769
scw Streptomyces cyaneogriseus
slc Streptomyces lydicus 103
sxi Streptomyces xiamenensis
strm Streptomyces sp. Mg1
strc Streptomyces sp. CNQ-509
samb Streptomyces ambofaciens
spri Streptomyces pristinaespiralis
scz Streptomyces sp. CFMR 7
scx Streptomyces sp. CdTB01
srw Streptomyces reticuli
strf Streptomyces sp. 4F
sle Streptomyces leeuwenhoekii
srn Streptomyces rubrolavendulae
spav Streptomyces parvulus
strt Streptomyces sp. SAT1
sgs Streptomyces griseochromogenes
stsi Streptomyces qaidamensis
sls Streptomyces lincolnensis
snr Streptomyces noursei
splu Streptomyces pluripotens
strd Streptomyces sp. CCM_MD2014
snw Streptomyces niveus
sauo Streptomyces autolyticus
ssia Streptomyces alfalfae
svu Streptomyces violaceoruber
spun Streptomyces fodineus
smal Streptomyces malaysiensis
slau Streptomyces laurentii
slx Streptomyces lavendulae subsp. lavendulae
stro Streptomyces sp. MOE7
sfk Streptomyces formicae
snz Streptomyces nigra
sge Streptomyces griseorubiginosus
srj Streptomyces rochei
sky Streptomyces koyangensis
sdx Streptomyces dengpaensis
sgd Streptomyces griseoviridis
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|
Kitasatospora (4)
|
ksk Kitasatospora setae
kau Kitasatospora aureofaciens
kit Kitasatospora sp. MMS16-BH015
|
3/37
4/37
9/37
|
Streptacidiphilus (1)
|
stri Streptacidiphilus sp. DSM 106435
|
7/37
|
Tropheryma (2)
|
Luteimicrobium (1)
|
lxl Luteimicrobium xylanilyticum
|
2/37
|
Leifsonia (3)
|
lxy Leifsonia xyli subsp. cynodontis DSM 46306
leif Leifsonia sp. PS1209
|
2/37
2/37
|
Clavibacter (5)
|
cmi Clavibacter michiganensis subsp. michiganensis
cms Clavibacter michiganensis subsp. sepedonicus
cmc Clavibacter michiganensis subsp. nebraskensis
cmh Clavibacter michiganensis subsp. insidiosus
ccap Clavibacter michiganensis subsp. capsici
|
2/37
2/37
2/37
2/37
2/37
|
Microbacterium (18)
|
mts Microbacterium testaceum
mim Microbacterium sp. CGR1
mio Microbacterium sp. No. 7
mix Microbacterium sp. XT11
mip Microbacterium sp. PAMC 28756
mcw Microbacterium chocolatum
mpal Microbacterium paludicola
mih Microbacterium sp. BH-3-3-3
micr Microbacterium sp. 1.5R
maur Microbacterium aurum
mhos Microbacterium hominis
mfol Microbacterium foliorum
moo Microbacterium oleivorans
mlv Microbacterium lemovicicum
mwa Microbacterium wangchenii
mprt Microbacterium protaetiae
msed Microbacterium sediminis
|
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Rhodoluna (2)
|
rla Rhodoluna lacicola
rpla Candidatus Rhodoluna planktonica
|
2/37
3/37
|
Aquiluna (1)
|
aqg Aquiluna sp. 15G-AUS-rot
|
2/37
|
Rathayibacter (7)
|
rry Rathayibacter rathayi
ria Rathayibacter iranicus
rfs Rathayibacter festucae
rte Rathayibacter tanaceti
|
4/37
4/37
2/37
2/37
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Curtobacterium (4)
|
cum Curtobacterium sp. MR_MD2014
cub Curtobacterium sp. BH-2-1-1
cug Curtobacterium sp. SGAir0471
|
3/37
2/37
2/37
|
Microterricola (1)
|
mvd Microterricola viridarii
|
7/37
|
Frondihabitans (1)
|
frp Frondihabitans sp. PAMC 28766
|
5/37
|
Agromyces (3)
|
agy Agromyces aureus
agm Agromyces sp. MF30-A
agf Agromyces protaetiae
|
7/37
2/37
5/37
|
Cryobacterium (2)
|
cart Cryobacterium arcticum
cry Cryobacterium sp. LW097
|
2/37
3/37
|
Cnuibacter (1)
|
cphy Cnuibacter physcomitrellae
|
5/37
|
Aurantimicrobium (3)
|
aum Aurantimicrobium sp. MWH-Mo1
|
4/37
|
Pontimonas (1)
|
Microcella (1)
|
malk Microcella alkaliphila
|
2/37
|
Mycetocola (1)
|
myl Mycetocola sp. 449
|
2/37
|
Salinibacterium (3)
|
salc Salinibacterium sp. CGMCC 1.16371
sala Salinibacterium sp. UTAS2018
sald Salinibacterium sp. dk2585
|
9/37
3/37
13/37
|
Humibacter (2)
|
hum Humibacter sp. BT305
huw Humibacter sp. WJ7-1
|
2/37
5/37
|
Gryllotalpicola (1)
|
Protaetiibacter (1)
|
lyd Protaetiibacter intestinalis
|
2/37
|
Lysinimonas (1)
|
lyk Lysinimonas sp. KACC 19322
|
2/37
|
Plantibacter (1)
|
plap Plantibacter sp. PA-3-X8
|
2/37
|
Leucobacter (3)
|
leu Leucobacter sp. DSM 101948
ltr Leucobacter triazinivorans
leb Leucobacter sp. HDW9A
|
3/37
7/37
2/37
|
Agrococcus (1)
|
agg Agrococcus sp. SGAir0287
|
2/37
|
Marisediminicola (1)
|
mant Marisediminicola antarctica
|
2/37
|
Herbiconiux (1)
|
hea Herbiconiux sp. SALV-R1
|
13/37
|
Arthrobacter (18)
|
art Arthrobacter sp. FB24
arr Arthrobacter sp. Rue61a
arm Arthrobacter sp. PAMC 25486
arl Arthrobacter sp. LS16
are Arthrobacter sp. ERGS1:01
aaq Arthrobacter alpinus R3.8
arw Arthrobacter alpinus A3
arh Arthrobacter sp. Hiyo8
ary Arthrobacter sp. YC-RL1
arz Arthrobacter sp. ATCC 21022
aru Arthrobacter sp. U41
arq Arthrobacter sp. QXT-31
arn Arthrobacter sp. YN
arx Arthrobacter sp. ZXY-2
acry Arthrobacter crystallopoietes
arth Arthrobacter sp. PGP41
artp Arthrobacter sp. PAMC25564
acit Arthrobacter citreus
|
2/37
2/37
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5/37
3/37
2/37
3/37
3/37
5/37
8/37
11/37
4/37
8/37
4/37
15/37
2/37
18/37
9/37
|
Psychromicrobium (1)
|
ari Psychromicrobium lacuslunae
|
5/37
|
Paenarthrobacter (1)
|
aau Paenarthrobacter aurescens
|
2/37
|
Pseudarthrobacter (5)
|
ach Pseudarthrobacter chlorophenolicus
apn Pseudarthrobacter phenanthrenivorans
psul Pseudarthrobacter sulfonivorans
psni Pseudarthrobacter sp. NIBRBAC000502771
psey Pseudarthrobacter sp. YJ56
|
3/37
11/37
14/37
11/37
8/37
|
Glutamicibacter (4)
|
aai Glutamicibacter arilaitensis
gar Glutamicibacter halophytocola
gcr Glutamicibacter creatinolyticus
glu Glutamicibacter sp. ZJUTW
|
2/37
3/37
2/37
10/37
|
Renibacterium (1)
|
rsa Renibacterium salmoninarum
|
2/37
|
Kocuria (6)
|
krh Kocuria rhizophila
kpl Kocuria palustris
kfv Kocuria flava
kii Kocuria indica
krs Kocuria rosea
kod Kocuria sp. KD4
|
2/37
9/37
9/37
5/37
15/37
5/37
|
Micrococcus (2)
|
mlu Micrococcus luteus
mick Micrococcus sp. KBS0714
|
2/37
2/37
|
Rothia (3)
|
Sinomonas (1)
|
satk Sinomonas atrocyanea
|
11/37
|
Neomicrococcus (1)
|
nae Neomicrococcus aestuarii
|
10/37
|
Auritidibacter (1)
|
aul Auritidibacter sp. NML130574
|
2/37
|
Citricoccus (1)
|
cig Citricoccus sp. SGAir0453
|
15/37
|
Beutenbergia (1)
|
bcv Beutenbergia cavernae
|
2/37
|
Brachybacterium (7)
|
brx Brachybacterium sp. P6-10-X1
brv Brachybacterium sp. VR2415
bgg Brachybacterium ginsengisoli
brz Brachybacterium sp. VM2412
bsau Brachybacterium saurashtrense
brr Brachybacterium sp. SGAir0954
|
2/37
2/37
2/37
2/37
2/37
2/37
|
Dermabacter (2)
|
Jonesia (1)
|
jde Jonesia denitrificans
|
2/37
|
Kytococcus (1)
|
Dermacoccus (2)
|
Luteipulveratus (1)
|
Xylanimonas (2)
|
xce Xylanimonas cellulosilytica
xyl Xylanimonas allomyrinae
|
2/37
9/37
|
Isoptericola (2)
|
iva Isoptericola variabilis
ido Isoptericola dokdonensis
|
2/37
3/37
|
Cellulosimicrobium (2)
|
cet Cellulosimicrobium sp. TH-20
cceu Cellulosimicrobium cellulans
|
2/37
2/37
|
Xylanimicrobium (1)
|
xya Xylanimicrobium sp. FW10M-9
|
2/37
|
Sanguibacter (2)
|
ske Sanguibacter keddieii
sanw Sanguibacter sp. HDW7
|
2/37
2/37
|
Cellulomonas (7)
|
cfl Cellulomonas flavigena
cfi Cellulomonas fimi
cga Cellulomonas gilvus
cez Cellulomonas sp. PSBB021
celz Cellulomonas shaoxiangyii
cej Cellulomonas sp. JZ18
celh Cellulomonas sp. H30R-01
|
2/37
2/37
2/37
2/37
2/37
2/37
2/37
|
Oerskovia (1)
|
oek Oerskovia sp. KBS0722
|
2/37
|
Pseudactinotalea (1)
|
psei Pseudactinotalea sp. HY158
|
2/37
|
Intrasporangium (1)
|
ica Intrasporangium calvum
|
9/37
|
Arsenicicoccus (1)
|
ars Arsenicicoccus sp. oral taxon 190
|
3/37
|
Serinicoccus (2)
|
serj Serinicoccus hydrothermalis
serw Serinicoccus sp. W204
|
2/37
2/37
|
Janibacter (3)
|
jte Janibacter indicus
jli Janibacter limosus
jme Janibacter melonis
|
9/37
9/37
9/37
|
Ornithinimicrobium (2)
|
orn Ornithinimicrobium sp. AMA3305
orz Ornithinimicrobium sp. H23M54
|
2/37
2/37
|
Tetrasphaera (1)
|
Phycicoccus (1)
|
phw Phycicoccus sp. HDW14
|
4/37
|
Brevibacterium (4)
|
bly Brevibacterium linens BS258
blin Brevibacterium aurantiacum
bri Brevibacterium sp. CS2
blut Brevibacterium luteolum
|
5/37
6/37
3/37
2/37
|
Dermatophilus (1)
|
dco Dermatophilus congolensis
|
2/37
|
Georgenia (1)
|
gez Georgenia sp. Z294
|
3/37
|
Cutibacterium (14)
|
Propionibacterium (5)
|
paus Propionibacterium australiense
|
6/37
|
Pseudopropionibacterium (1)
|
Acidipropionibacterium (4)
|
Microlunatus (3)
|
mik Microlunatus sp. KUDC0627
micg Microlunatus sp. Gsoil 973
|
4/37
3/37
|
Tessaracoccus (4)
|
tfl Tessaracoccus flavus
tfa Tessaracoccus flavescens
tes Tessaracoccus aquimaris
tez Tessaracoccus sp. T2.5-30
|
2/37
2/37
2/37
2/37
|
Raineyella (1)
|
rain Raineyella sp. CBA3103
|
12/37
|
Propioniciclava (1)
|
prv Propioniciclava sp. HDW11
|
4/37
|
Nocardioides (8)
|
nca Nocardioides sp. JS614
ndk Nocardioides dokdonensis
nbe Nocardioides baekrokdamisoli
|
10/37
6/37
3/37
|
Kribbella (1)
|
kfl Kribbella flavida
|
2/37
|
Pimelobacter (1)
|
psim Pimelobacter simplex
|
8/37
|
Aeromicrobium (4)
|
aez Aeromicrobium sp. 592
aeb Aeromicrobium sp. A1-2
|
4/37
4/37
|
Micropruina (1)
|
mgg Micropruina glycogenica
|
2/37
|
Thermobifida (1)
|
Nocardiopsis (3)
|
nda Nocardiopsis dassonvillei
ngv Nocardiopsis gilva
|
4/37
3/37
|
Streptomonospora (1)
|
strr Streptomonospora sp. M2
|
4/37
|
Thermomonospora (1)
|
tcu Thermomonospora curvata
|
11/37
|
Actinomadura (1)
|
actw Actinomadura sp. WMMB499
|
15/37
|
Streptosporangium (1)
|
sro Streptosporangium roseum
|
6/37
|
Nonomuraea (2)
|
noa Nonomuraea sp. ATCC 55076
now Nonomuraea sp. WYY166
|
9/37
11/37
|
Frankia (5)
|
fra Frankia casuarinae
fre Frankia sp. EAN1pec
fri Frankia inefficax
fal Frankia alni
fsy Candidatus Frankia datiscae
|
2/37
5/37
10/37
8/37
9/37
|
Acidothermus (1)
|
Nakamurella (2)
|
nml Nakamurella multipartita
|
5/37
|
Geodermatophilus (1)
|
gob Geodermatophilus obscurus
|
6/37
|
Blastococcus (1)
|
bsd Blastococcus saxobsidens
|
3/37
|
Modestobacter (1)
|
mmar Modestobacter marinus
|
8/37
|
Kineococcus (1)
|
Saccharopolyspora (3)
|
sen Saccharopolyspora erythraea
sace Saccharopolyspora sp. E2A
sacg Saccharopolyspora sp. ASAGF58
|
6/37
9/37
5/37
|
Saccharomonospora (2)
|
svi Saccharomonospora viridis
sacc Saccharomonospora sp. 31sw
|
9/37
3/37
|
Amycolatopsis (11)
|
amd Amycolatopsis mediterranei U32
amn Amycolatopsis mediterranei S699
amm Amycolatopsis mediterranei S699
amz Amycolatopsis mediterranei RB
aoi Amycolatopsis keratiniphila
aja Amycolatopsis japonica
amq Amycolatopsis methanolica
amyc Amycolatopsis sp. AA4
amyb Amycolatopsis sp. BJA-103
aab Amycolatopsis albispora
amyy Amycolatopsis sp. YIM 10
|
13/37
13/37
13/37
13/37
10/37
13/37
16/37
15/37
10/37
8/37
11/37
|
Pseudonocardia (8)
|
pdx Pseudonocardia dioxanivorans
psea Pseudonocardia sp. AL041005-10
psee Pseudonocardia sp. EC080625-04
pseh Pseudonocardia sp. HH130629-09
pseq Pseudonocardia sp. EC080610-09
pecq Pseudonocardia sp EC080619-01
phh Pseudonocardia sp. HH130630-07
paut Pseudonocardia autotrophica
|
13/37
5/37
8/37
3/37
12/37
12/37
5/37
5/37
|
Actinosynnema (2)
|
apre Actinosynnema pretiosum
ami Actinosynnema mirum
|
7/37
7/37
|
Saccharothrix (2)
|
ssyi Saccharothrix syringae
|
4/37
|
Kutzneria (1)
|
kal Kutzneria albida
|
10/37
|
Kibdelosporangium (1)
|
kphy Kibdelosporangium phytohabitans
|
10/37
|
Lentzea (1)
|
led Lentzea guizhouensis
|
4/37
|
Actinoalloteichus (5)
|
ahm Actinoalloteichus hymeniacidonis
|
3/37
|
Alloactinosynnema (1)
|
alo Alloactinosynnema sp. L-07
|
8/37
|
Prauserella (1)
|
pmad Prauserella marina
|
11/37
|
Salinispora (2)
|
stp Salinispora tropica
saq Salinispora arenicola
|
6/37
7/37
|
Micromonospora (6)
|
mau Micromonospora aurantiaca
mil Micromonospora sp. L5
micb Micromonospora sp. B006
mtua Micromonospora tulbaghiae
mich Micromonospora sp. HM134
mtem Micromonospora terminaliae
|
5/37
5/37
6/37
5/37
7/37
5/37
|
Verrucosispora (1)
|
vma Verrucosispora maris
|
10/37
|
Actinoplanes (5)
|
ams Actinoplanes missouriensis
afs Actinoplanes friuliensis
|
9/37
7/37
|
Plantactinospora (3)
|
plk Plantactinospora sp. KBS50
plab Plantactinospora sp. BC1
plat Plantactinospora sp. BB1
|
10/37
6/37
6/37
|
Phytohabitans (2)
|
pfla Phytohabitans flavus
psuu Phytohabitans suffuscus
|
10/37
12/37
|
Catenulispora (1)
|
cai Catenulispora acidiphila
|
7/37
|
Stackebrandtia (1)
|
Arcanobacterium (2)
|
Mobiluncus (1)
|
Trueperella (3)
|
tbw Trueperella bialowiezensis
|
2/37
|
Actinotignum (2)
|
Schaalia (2)
|
Actinomyces (11)
|
ard Actinomyces radicidentis
ahw Actinomyces howellii
|
2/37
2/37
|
Flaviflexus (2)
|
fsl Flaviflexus salsibiostraticola
flh Flaviflexus sp. H23T48
|
2/37
2/37
|
Bifidobacterium (56)
|
Gardnerella (3)
|
Scardovia (1)
|
Parascardovia (1)
|
Thermobispora (1)
|
Actinopolyspora (1)
|
aey Actinopolyspora erythraea
|
5/37
|
Planktophila (6)
|
Nanopelagicus (3)
|
Epidermidibacterium (1)
|
eke Epidermidibacterium keratini
|
2/37
|
unclassified Actinobacteria (1)
|
Rubrobacter (3)
|
rxy Rubrobacter xylanophilus
rrd Rubrobacter radiotolerans
rub Rubrobacter sp. SCSIO 52909
|
5/37
5/37
5/37
|
Baekduia (1)
|
bsol Baekduia soli
|
3/37
|
Conexibacter (1)
|
cwo Conexibacter woesei
|
8/37
|
Acidimicrobium (1)
|
Ilumatobacter (1)
|
aym Ilumatobacter coccineus
|
4/37
|
Cryptobacterium (1)
|
Slackia (1)
|
Eggerthella (2)
|
Gordonibacter (1)
|
gpa Gordonibacter pamelaeae
|
3/37
|
Adlercreutzia (1)
|
Denitrobacterium (1)
|
Atopobium (1)
|
Olsenella (2)
|
Parolsenella (1)
|
Coriobacterium (1)
|
Collinsella (1)
|
unclassified Coriobacteriaceae (1)
|
Egibacter (1)
|
erz Egibacter rhizosphaerae
|
6/37
|
Euzebya (1)
|
euz Euzebya sp. DY32-46
|
7/37
|
Cyanobacteria (128)
|
Synechocystis (8)
|
Synechococcus (23)
|
Thermosynechococcus (4)
|
Cyanobium (2)
|
Dactylococcopsis (1)
|
Chamaesiphon (1)
|
Leptolyngbya (4)
|
Halomicronema (1)
|
Pseudanabaena (2)
|
Prochlorococcus (14)
|
Acaryochloris (1)
|
Thermoleptolyngbya (1)
|
Gloeocapsa (1)
|
Geminocystis (2)
|
Chondrocystis (1)
|
Microcystis (4)
|
Cyanobacterium (3)
|
Halothece (1)
|
Euhalothece (1)
|
Atelocyanobacterium (1)
|
Crocosphaera (2)
|
Rippkaea (2)
|
Gloeothece (2)
|
Cyanothece (1)
|
Trichodesmium (1)
|
Microcoleus (1)
|
Arthrospira (1)
|
Planktothrix (1)
|
Oxynema (1)
|
Limnospira (1)
|
Geitlerinema (1)
|
Oscillatoria (2)
|
Moorea (1)
|
Crinalium (1)
|
Gloeobacter (2)
|
Nostoc (8)
|
Trichormus (2)
|
Anabaena (4)
|
Cylindrospermum (1)
|
Calothrix (3)
|
Rivularia (1)
|
Fischerella (1)
|
Nodularia (1)
|
Dolichospermum (2)
|
dfs Dolichospermum flos-aquae
|
2/37
|
Tolypothrix (1)
|
unclassified Nostocales (1)
|
Chroococcidiopsis (1)
|
Pleurocapsa (1)
|
Stanieria (2)
|
unclassified Cyanobacteria (2)
|
unclassified Melainabacteria (1)
|
Chloroflexi (31)
|
Dehalococcoides (12)
|
Dehalogenimonas (3)
|
Roseiflexus (2)
|
rrs Roseiflexus sp. RS-1
rca Roseiflexus castenholzii
|
7/37
7/37
|
Chloroflexus (3)
|
cau Chloroflexus aurantiacus
chl Chloroflexus aurantiacus Y-400-fl
cag Chloroflexus aggregans
|
8/37
8/37
7/37
|
Herpetosiphon (1)
|
hau Herpetosiphon aurantiacus
|
2/37
|
Thermomicrobium (1)
|
tro Thermomicrobium roseum
|
7/37
|
Sphaerobacterineae (1)
|
sti Sphaerobacter thermophilus
|
2/37
|
Anaerolinea (1)
|
Brevefilum (1)
|
Pelolinea (1)
|
unclassified Anaerolineaceae (1)
|
Caldilinea (1)
|
cap Caldilinea aerophila
|
6/37
|
Promineofilum (1)
|
pbf Candidatus Promineofilum breve
|
2/37
|
unclassified Ktedonobacterales (1)
|
kbs Ktedonobacterales bacterium SCAWS-G2
|
8/37
|
Tepidiforma (1)
|
Deinococcus-Thermus (33)
|
Deinococcus (16)
|
dra Deinococcus radiodurans
dge Deinococcus geothermalis
ddr Deinococcus deserti
dmr Deinococcus maricopensis
dpt Deinococcus proteolyticus
dgo Deinococcus gobiensis
dpd Deinococcus peraridilitoris
dch Deinococcus soli
dab Deinococcus actinosclerus
dpu Deinococcus puniceus
dez Deinococcus irradiatisoli
dwu Deinococcus wulumuqiensis
dfc Deinococcus ficus
dein Deinococcus sp. AJ005
dga Deinococcus grandis
|
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
3/37
2/37
|
Truepera (1)
|
tra Truepera radiovictrix
|
2/37
|
Thermus (10)
|
tth Thermus thermophilus HB27
ttj Thermus thermophilus HB8
tts Thermus thermophilus SG0.5JP17-16
ttl Thermus thermophilus JL-18
tsc Thermus scotoductus
thc Thermus sp. CCB_US3_UF1
tos Thermus oshimai
taq Thermus aquaticus
tpar Thermus parvatiensis
tbc Thermus brockianus
|
2/37
8/37
2/37
9/37
7/37
10/37
7/37
2/37
2/37
10/37
|
Meiothermus (4)
|
mrb Meiothermus ruber DSM 1279
mre Meiothermus ruber DSM 1279
msv Meiothermus silvanus
mtai Meiothermus taiwanensis
|
2/37
2/37
2/37
2/37
|
Oceanithermus (1)
|
Marinithermus (1)
|
mhd Marinithermus hydrothermalis
|
2/37
|
Other Terrabacteria group (3)
|
Chthonomonas (1)
|
Fimbriimonas (1)
|
fgi Fimbriimonas ginsengisoli
|
2/37
|
Thermobaculum (1)
|
ttr Thermobaculum terrenum
|
2/37
|
Chlamydiae (120)
|
Chlamydia (114)
Protochlamydia (2)
Parachlamydia (1)
Neochlamydia (1)
Waddlia (1)
Simkania (1)
|
|
Verrucomicrobia (14)
|
Opitutus (1)
|
ote Opitutus terrae
|
2/37
|
Lacunisphaera (1)
|
obg Lacunisphaera limnophila
|
2/37
|
Nibricoccus (1)
|
vbh Nibricoccus aquaticus HZ-65
|
2/37
|
unclassified Opitutaceae (1)
|
obt Opitutaceae bacterium TAV5
|
2/37
|
Coraliomargarita (1)
|
Akkermansia (2)
|
Roseimicrobium (1)
|
roo Roseimicrobium sp. ORNL1
|
2/37
|
Luteolibacter (1)
|
luo Luteolibacter sp. G-1-1-1
|
2/37
|
Xiphinematobacter (1)
|
Methylacidiphilum (2)
|
unclassified Verrucomicrobia (2)
|
vba Verrucomicrobia bacterium IMCC26134
vbs Verrucomicrobia bacterium S94
|
2/37
4/37
|
Planctomycetes (31)
|
Rhodopirellula (1)
|
Pirellula (2)
|
Roseimaritima (1)
|
Mariniblastus (1)
|
Thermogutta (1)
|
Lacipirellula (1)
|
Planctopirus (2)
|
Rubinisphaera (1)
|
Planctomyces (2)
|
Fuerstia (1)
|
Gimesia (2)
|
Bremerella (1)
|
Gemmata (3)
|
ges Gemmata sp. SH-PL17
gog Gemmata obscuriglobus
gms Gemmata massiliana
|
3/37
3/37
3/37
|
Tuwongella (1)
|
Limnoglobus (1)
|
lrs Limnoglobus roseus
|
2/37
|
Isosphaera (1)
|
Singulisphaera (1)
|
Paludisphaera (1)
|
pbor Paludisphaera borealis
|
4/37
|
Aquisphaera (1)
|
agv Aquisphaera giovannonii
|
3/37
|
Kuenenia (1)
|
Phycisphaera (1)
|
Sedimentisphaera (2)
|
Limihaloglobus (1)
|
Anaerohalosphaera (1)
|
Kiritimatiellaeota (1)
|
Kiritimatiella (1)
|
|
Lentisphaerae (1)
|
unclassified Victivallales (1)
|
|
Spirochaetes (86)
|
Borreliella (19)
|
Borrelia (11)
|
Treponema (23)
|
tpi Treponema primitia
|
6/37
|
Sediminispirochaeta (1)
|
ssm Sediminispirochaeta smaragdinae
|
3/37
|
Spirochaeta (4)
|
Sphaerochaeta (3)
|
Salinispira (1)
|
Oceanispirochaeta (1)
|
Leptospira (13)
|
laj Leptospira tipperaryensis
|
2/37
|
Turneriella (1)
|
Brachyspira (9)
|
Acidobacteria (13)
|
Koribacter (1)
|
aba Candidatus Koribacter versatilis
|
2/37
|
Acidobacterium (1)
|
Granulicella (3)
|
acm Granulicella tundricola
gma Granulicella mallensis
grw Granulicella sp. WH15
|
6/37
3/37
6/37
|
Terriglobus (3)
|
tsa Terriglobus saanensis
trs Terriglobus roseus
talb Terriglobus albidus
|
3/37
4/37
4/37
|
Acidisarcina (1)
|
Edaphobacter (1)
|
Solibacter (1)
|
Chloracidobacterium (1)
|
Luteitalea (1)
|
abac Luteitalea pratensis
|
2/37
|
Elusimicrobia (4)
|
Elusimicrobium (1)
Endomicrobium (3)
|
|
Fusobacteria (24)
|
Fusobacterium (13)
|
Ilyobacter (1)
|
Leptotrichia (7)
|
lgo Leptotrichia goodfellowii
|
2/37
|
Sebaldella (1)
|
str Sebaldella termitidis
|
3/37
|
Streptobacillus (1)
|
Sneathia (1)
|
Synergistetes (6)
|
Thermanaerovibrio (1)
|
Aminobacterium (1)
|
aco Aminobacterium colombiense
|
2/37
|
Thermovirga (1)
|
Anaerobaculum (1)
|
Fretibacterium (1)
|
Cloacibacillus (1)
|
cpor Cloacibacillus porcorum
|
2/37
|
Fibrobacteres (2)
|
Fibrobacter (2)
|
|
Gemmatimonadetes (3)
|
Gemmatimonas (2)
|
gau Gemmatimonas aurantiaca
gph Gemmatimonas phototrophica
|
2/37
2/37
|
Gemmatirosa (1)
|
gba Gemmatirosa kalamazoonesis
|
2/37
|
Bacteroidetes (360)
|
Bacteroides (20)
|
bsa Bacteroides salanitronis
bdo Bacteroides dorei HS1_L_1_B_010
bdh Bacteroides dorei HS1_L_3_B_079
|
2/37
2/37
2/37
|
Porphyromonas (6)
|
Fermentimonas (1)
|
pbt Fermentimonas caenicola
|
2/37
|
Petrimonas (2)
|
pmuc Petrimonas mucosa
pet Petrimonas sp. IBARAKI
|
2/37
2/37
|
Paludibacter (1)
|
Parabacteroides (2)
|
Tannerella (2)
|
Muribaculum (1)
|
Duncaniella (1)
|
Barnesiella (1)
|
Proteiniphilum (1)
|
psac Proteiniphilum saccharofermentans
|
2/37
|
Dysgonomonas (1)
|
dys Dysgonomonas sp. HDW5A
|
2/37
|
Odoribacter (1)
|
Butyricimonas (1)
|
Azobacteroides (1)
|
Prevotella (10)
|
Alloprevotella (1)
|
Alistipes (6)
|
Mucinivorans (1)
|
unclassified Bacteroidales (1)
|
Draconibacterium (2)
|
Salinivirga (1)
|
Alkalitalea (1)
|
Labilibaculum (1)
|
Salinibacter (2)
|
Rhodothermus (2)
|
rmr Rhodothermus marinus DSM 4252
rmg Rhodothermus marinus SG0.5JP17-172
|
2/37
2/37
|
unclassified Rhodothermaceae (1)
|
Chitinophaga (4)
|
cbae Chitinophaga caeni
chit Chitinophaga sp. XS-30
|
5/37
2/37
|
Niastella (1)
|
nko Niastella koreensis
|
3/37
|
Niabella (2)
|
Flavisolibacter (2)
|
fla Flavisolibacter tropicus
fgg Flavisolibacter ginsenosidimutans
|
3/37
2/37
|
Arachidicoccus (4)
|
Filimonas (1)
|
Pseudoflavitalea (1)
|
pseg Paraflavitalea soli
|
3/37
|
Panacibacter (1)
|
pgin Panacibacter ginsenosidivorans
|
2/37
|
Pseudobacter (1)
|
pgo Pseudobacter ginsenosidimutans
|
3/37
|
Flavihumibacter (1)
|
Haliscomenobacter (1)
|
Saprospira (1)
|
Pedobacter (7)
|
Pseudopedobacter (1)
|
psn Pseudopedobacter saltans
|
2/37
|
Sphingobacterium (9)
|
sht Sphingobacterium sp. ML3W
sdj Sphingobacterium daejeonense
|
7/37
2/37
|
Solitalea (1)
|
Mucilaginibacter (8)
|
mup Mucilaginibacter sp. PAMC 26640
muc Mucilaginibacter xinganensis
mgot Mucilaginibacter gotjawali
muh Mucilaginibacter sp. HYN0043
mgin Mucilaginibacter ginsenosidivorans
mgk Mucilaginibacter ginsenosidivorax
mrub Mucilaginibacter rubeus
mgos Mucilaginibacter gossypii
|
5/37
2/37
2/37
3/37
2/37
3/37
3/37
3/37
|
Anseongella (1)
|
agd Anseongella ginsenosidimutans
|
2/37
|
Olivibacter (1)
|
oli Olivibacter sp. LS-1
|
3/37
|
unclassified Sphingobacteriaceae (1)
|
Cyclobacterium (2)
|
camu Cyclobacterium amurskyense
|
2/37
|
Belliella (1)
|
Echinicola (3)
|
est Echinicola strongylocentroti
|
2/37
|
Algoriphagus (1)
|
Cytophaga (1)
|
Dyadobacter (1)
|
dfe Dyadobacter fermentans
|
2/37
|
Spirosoma (6)
|
sli Spirosoma linguale
srd Spirosoma radiotolerans
smon Spirosoma montaniterrae
spib Spirosoma sp. BT328
|
2/37
2/37
2/37
3/37
|
Leadbetterella (1)
|
Runella (3)
|
rsi Runella slithyformis
run Runella sp. HYN0085
rup Runella sp. SP2
|
2/37
2/37
2/37
|
Emticicia (1)
|
eol Emticicia oligotrophica
|
2/37
|
Fibrella (2)
|
fae Fibrella aestuarina
fib Fibrella sp. ES10-3-2-2
|
2/37
2/37
|
Allopseudarcicella (1)
|
Arcticibacterium (1)
|
Rhodocytophaga (1)
|
rhoz Rhodocytophaga sp. 172606-1
|
3/37
|
Flexibacter (1)
|
Hymenobacter (10)
|
hsw Hymenobacter swuensis
hyg Hymenobacter sedentarius
hyp Hymenobacter sp. PAMC 26554
hyz Hymenobacter sp. PAMC 26628
hyj Hymenobacter jejuensis
|
3/37
3/37
2/37
2/37
3/37
|
Pontibacter (2)
|
pko Pontibacter korlensis
|
4/37
|
Rufibacter (3)
|
ruf Rufibacter sp. DG31D
rud Rufibacter sp. DG15C
|
3/37
3/37
|
Nibribacter (1)
|
nib Nibribacter sp. BT10
|
3/37
|
Marivirga (1)
|
mtt Marivirga tractuosa
|
3/37
|
Flammeovirga (2)
|
Fabibacter (1)
|
fpf Fabibacter pacificus
|
2/37
|
unclassified Flammeovirgaceae (1)
|
fbt Flammeovirgaceae bacterium 311
|
2/37
|
Amoebophilus (1)
|
Cardinium (3)
|
Chryseolinea (1)
|
chk Chryseolinea soli
|
5/37
|
Gramella (4)
|
gfo Gramella forsetii
gfl Gramella flava
grs Gramella fulva
|
2/37
3/37
3/37
|
Flavobacterium (25)
|
ffa Flavobacterium faecale
fse Flavobacterium sediminis
|
2/37
7/37
|
Capnocytophaga (13)
|
Robiginitalea (1)
|
Zunongwangia (1)
|
Croceibacter (1)
|
Riemerella (6)
|
Maribacter (5)
|
marm Maribacter sp. 1_2014MBL_MicDiv
marb Maribacter cobaltidurans
|
3/37
3/37
|
Cellulophaga (5)
|
Weeksella (1)
|
Dokdonia (4)
|
Lacinutrix (3)
|
Zobellia (1)
|
zga Zobellia galactanivorans
|
2/37
|
Muricauda (3)
|
Aequorivita (2)
|
Ornithobacterium (2)
|
Psychroflexus (1)
|
Nonlabens (5)
|
ndo Nonlabens dokdonensis
|
2/37
|
Polaribacter (5)
|
pom Polaribacter sp. MED152
prn Polaribacter reichenbachii
|
2/37
3/37
|
Elizabethkingia (9)
|
Myroides (4)
|
Chryseobacterium (15)
|
chry Chryseobacterium sp. T16E-39
|
4/37
|
Winogradskyella (2)
|
Siansivirga (1)
|
Algibacter (1)
|
Sediminicola (1)
|
Tenacibaculum (5)
|
tmp Tenacibaculum mesophilum
|
2/37
|
Lutibacter (1)
|
Urechidicola (1)
|
Wenyingzhuangia (1)
|
Formosa (3)
|
Salegentibacter (1)
|
Seonamhaeicola (1)
|
Arenibacter (1)
|
aalg Arenibacter algicola
|
3/37
|
Olleya (2)
|
Flavivirga (1)
|
fek Flavivirga eckloniae
|
2/37
|
Tamlana (1)
|
Aureitalea (1)
|
Spongiibacterium (1)
|
Kordia (2)
|
Mariniflexile (1)
|
Aquimarina (3)
|
Euzebyella (1)
|
Cloacibacterium (1)
|
Muriicola (1)
|
Psychroserpens (1)
|
Antarcticibacterium (2)
|
afla Antarcticibacterium flavum
anp Antarcticibacterium sp. PAMC 28998
|
2/37
2/37
|
Empedobacter (1)
|
Oceanihabitans (1)
|
oci Oceanihabitans sp. IOP_32
|
2/37
|
Bergeyella (1)
|
Marinirhabdus (1)
|
Apibacter (1)
|
Mesoflavibacter (1)
|
Galbibacter (1)
|
unclassified Flavobacteriaceae (3)
|
Sulcia (9)
|
Blattabacterium (9)
|
Fluviicola (2)
|
Owenweeksia (1)
|
Ichthyobacterium (1)
|
Walczuchella (1)
|
Uzinura (1)
|
unclassified Bacteroidetes (1)
|
Chlorobi (17)
|
Chlorobaculum (3)
|
Chlorobium (5)
|
Pelodictyon (2)
|
Prosthecochloris (4)
|
Chloroherpeton (1)
|
Ignavibacterium (1)
|
ial Ignavibacterium album
|
2/37
|
Melioribacter (1)
|
Balneolaeota (1)
|
Cyclonatronum (1)
|
|
Cloacimonetes (1)
|
Cloacimonas (1)
|
|
Aquificae (14)
|
Aquifex (1)
Hydrogenobaculum (3)
Hydrogenobacter (2)
Thermocrinis (2)
Sulfurihydrogenibium (2)
Persephonella (1)
Thermosulfidibacter (1)
Thermovibrio (1)
Desulfurobacterium (1)
|
|
Thermotogae (32)
|
Thermotoga (13)
Pseudothermotoga (3)
Thermosipho (4)
Fervidobacterium (3)
Petrotoga (1)
Marinitoga (2)
Defluviitoga (1)
Kosmotoga (2)
Mesotoga (2)
Athalassotoga (1)
|
|
Coprothermobacterota (1)
|
Coprothermobacter (1)
|
|
Caldiserica (1)
|
Caldisericum (1)
|
|
Chrysiogenetes (1)
|
Desulfurispirillum (1)
|
|
Deferribacteres (5)
|
Deferribacter (1)
Denitrovibrio (1)
Calditerrivibrio (1)
Flexistipes (1)
Geovibrio (1)
|
|
Calditrichaeota (1)
|
Caldithrix (1)
|
|
Dictyoglomi (2)
|
Dictyoglomus (2)
|
|
Nitrospirae (9)
|
Thermodesulfovibrio (1)
|
Nitrospira (4)
|
nde Nitrospira defluvii
nmv Nitrospira moscoviensis
nio Candidatus Nitrospira inopinata
nja Nitrospira japonica
|
5/37
3/37
2/37
2/37
|
Leptospirillum (4)
|
Thermodesulfobacteria (7)
|
Thermodesulfatator (1)
Thermodesulfobacterium (3)
Caldimicrobium (1)
Thermosulfuriphilus (1)
Thermosulfurimonas (1)
|
|
Saccharibacteria (4)
|
Saccharimonas (4)
|
|
Peregrinibacteria (1)
|
Peribacter (1)
|
|
Bipolaricaulota (2)
|
Bipolaricaulis (2)
|
|
Other (4)
|
Vampirococcus (1)
Methylomirabilis (1)
Chazhemtobacterium (1)
Babela (1)
|
|
unclassified Bacteria (11)
|
srg Candidate division SR1 bacterium Aalborg_AAW-1
|
2/37
|
|
|
Archaea (326)
|
Euryarchaeota (226)
|
Methanocaldococcus (6)
|
Methanotorris (1)
|
Methanococcus (11)
|
Methanothermococcus (1)
|
Methanofervidicoccus (1)
|
Methanothermobacter (8)
|
Methanosphaera (2)
|
Methanobrevibacter (6)
|
Methanobacterium (10)
|
Methanothermus (1)
|
Methanopyrus (1)
|
Archaeoglobus (5)
|
Ferroglobus (1)
|
Geoglobus (2)
|
Thermoplasma (2)
|
Picrophilus (1)
|
Ferroplasma (2)
|
Cuniculiplasma (1)
|
unclassified Thermoplasmatales (1)
|
Methanomethylophilus (1)
|
Methanomassiliicoccus (1)
|
Methanoplasma (1)
|
unclassified Thermoplasmata (1)
|
Aciduliprofundum (2)
|
Pyrococcus (8)
|
Thermococcus (27)
|
Palaeococcus (1)
|
Methanosarcina (23)
|
Methanococcoides (2)
|
Methanohalophilus (2)
|
Methanohalobium (1)
|
Methanosalsum (1)
|
Methanolobus (2)
|
Methanomethylovorans (1)
|
Methanosaeta (3)
|
Methanospirillum (1)
|
Methanocorpusculum (1)
|
Methanoculleus (3)
|
Methanolacinia (1)
|
Methanoregula (2)
|
Methanosphaerula (1)
|
Methanocella (3)
|
Halobacterium (4)
|
hdl Halobacterium sp. DL1
hhb Halobacterium hubeiense
|
5/37
5/37
|
Halalkalicoccus (1)
|
hje Halalkalicoccus jeotgali
|
3/37
|
Halodesulfurarchaeum (2)
|
halh Halodesulfurarchaeum formicicum HTSR1
hhsr Haloarchaeon HSR6
|
2/37
5/37
|
Halanaeroarchaeum (2)
|
Salarchaeum (1)
|
Halarchaeum (1)
|
Haloarcula (6)
|
hhi Haloarcula hispanica ATCC 33960
hhn Haloarcula hispanica N601
hab Haloarcula sp. CBA1115
hta Haloarcula taiwanensis
halj Haloarcula sp. JP-L23
|
2/37
2/37
2/37
2/37
2/37
|
Natronomonas (2)
|
Halorhabdus (3)
|
hti Halorhabdus tiamatea
|
2/37
|
Halomicrobium (3)
|
Halorientalis (1)
|
hali Halorientalis sp. IM1011
|
3/37
|
Halapricum (1)
|
hsn Halapricum salinum
|
2/37
|
unclassified Haloarculaceae (1)
|
Haloquadratum (2)
|
Haloferax (4)
|
hvo Haloferax volcanii
hme Haloferax mediterranei
hgi Haloferax gibbonsii
hale Haloferax alexandrinus
|
2/37
5/37
2/37
2/37
|
Halogeometricum (1)
|
Haloplanus (4)
|
haq Haloplanus sp. CBA1112
haj Haloplanus sp. CBA1113
haer Haloplanus aerogenes
|
3/37
3/37
2/37
|
Halobellus (1)
|
hlm Halobellus limi
|
8/37
|
Haloprofundus (1)
|
Halorubrum (5)
|
hla Halorubrum lacusprofundi
hezz Halorubrum ezzemoulense
|
2/37
2/37
|
Salinigranum (1)
|
srub Salinigranum rubrum
|
5/37
|
Halohasta (1)
|
hae Halohasta litchfieldiae
|
2/37
|
Halolamina (1)
|
Halobonum (1)
|
Halalkaliarchaeum (1)
|
unclassified Haloferacales (1)
|
Haloterrigena (3)
|
htu Haloterrigena turkmenica
hda Haloterrigena daqingensis
hjt Haloterrigena jeotgali
|
2/37
2/37
2/37
|
Natrialba (1)
|
nmg Natrialba magadii
|
2/37
|
Halopiger (1)
|
hxa Halopiger xanaduensis
|
2/37
|
Natrinema (4)
|
npe Natrinema pellirubrum
nvr Natrinema versiforme
npl Natrinema pallidum
|
2/37
2/37
2/37
|
Natronobacterium (1)
|
Halovivax (1)
|
hru Halovivax ruber
|
2/37
|
Natronococcus (1)
|
nou Natronococcus occultus
|
2/37
|
Salinarchaeum (1)
|
sali Salinarchaeum sp. Harcht-Bsk1
|
2/37
|
Halostagnicola (1)
|
hlr Halostagnicola larsenii
|
5/37
|
Halobiforma (1)
|
Natronolimnobius (3)
|
naj Natronolimnobius aegyptiacus
|
8/37
|
Natronorubrum (2)
|
nas Natronorubrum aibiense
|
2/37
|
Natrialbaceae (1)
|
unclassified Nanohaloarchaea (1)
|
Crenarchaeota (71)
|
Aeropyrum (2)
|
ape Aeropyrum pernix
acj Aeropyrum camini
|
2/37
2/37
|
Staphylothermus (2)
|
Ignicoccus (2)
|
Desulfurococcus (3)
|
Thermosphaera (1)
|
Ignisphaera (1)
|
Thermogladius (1)
|
Hyperthermus (1)
|
Pyrolobus (1)
|
Pyrodictium (1)
|
Sulfurisphaera (2)
|
sto Sulfurisphaera tokodaii
soh Sulfurisphaera ohwakuensis
|
3/37
2/37
|
Saccharolobus (5)
|
sso Saccharolobus solfataricus P2
|
2/37
|
Sulfolobus (15)
|
sai Sulfolobus acidocaldarius DSM 639
sacn Sulfolobus acidocaldarius N8
sacr Sulfolobus acidocaldarius Ron12/I
sacs Sulfolobus acidocaldarius SUSAZ
sis Sulfolobus islandicus L.S.2.15
sia Sulfolobus islandicus M.14.25
sim Sulfolobus islandicus M.16.27
sid Sulfolobus islandicus M.16.4
siy Sulfolobus islandicus Y.G.57.14
sin Sulfolobus islandicus Y.N.15.51
sii Sulfolobus islandicus L.D.8.5
sih Sulfolobus islandicus HVE10/4
sir Sulfolobus islandicus REY15A
sic Sulfolobus islandicus LAL14/1
sula Sulfolobus sp. A20
|
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
2/37
|
Metallosphaera (5)
|
mse Metallosphaera sedula
mcn Metallosphaera cuprina
mhk Metallosphaera hakonensis JCM 8857 = DSM 7519
mpru Metallosphaera prunae
mten Metallosphaera tengchongensis
|
2/37
2/37
2/37
2/37
2/37
|
Acidianus (5)
|
aman Acidianus manzaensis
abri Acidianus brierleyi
asul Acidianus sulfidivorans
|
3/37
2/37
2/37
|
Sulfodiicoccus (1)
|
Stygiolobus (1)
|
Sulfuracidifex (1)
|
Pyrobaculum (8)
|
pai Pyrobaculum aerophilum
pas Pyrobaculum arsenaticum
pyr Pyrobaculum ferrireducens
pog Pyrobaculum oguniense
|
2/37
2/37
2/37
2/37
|
Caldivirga (1)
|
Thermoproteus (2)
|
Vulcanisaeta (2)
|
Thermofilum (4)
|
Acidilobus (2)
|
Caldisphaera (1)
|
Fervidicoccus (1)
|
Thaumarchaeota (18)
|
Nitrosopumilus (6)
|
nmr Nitrosopumilus maritimus
|
2/37
|
Nitrosomarinus (1)
|
Cenarchaeum (1)
|
Nitrososphaera (3)
|
nga Candidatus Nitrososphaera gargensis
nev Candidatus Nitrososphaera evergladensis
|
3/37
3/37
|
Nitrosocosmicus (2)
|
taa Candidatus Nitrosocosmicus oleophilus
nfn Candidatus Nitrosocosmicus franklandus
|
3/37
2/37
|
Nitrosocaldus (1)
|
Caldiarchaeum (1)
|
csu Candidatus Caldiarchaeum subterraneum
|
2/37
|
Nitrosopelagicus (1)
|
Nitrosotenuis (1)
|
Nitrosotalea (1)
|
Korarchaeota (1)
|
Korarchaeum (1)
|
|
Bathyarchaeota (2)
|
unclassified Bathyarchaeota (2)
|
|
Geothermarchaeota (1)
|
Conexivisphaera (1)
|
|
Nanoarchaeota (2)
|
Nanoarchaeum (1)
Nanopusillus (1)
|
|
Micrarchaeota (1)
|
Candidatus Mancarchaeum (1)
|
|
Lokiarchaeota (2)
|
Lokiarchaeum (1)
Prometheoarchaeum (1)
|
|
unclassified Archaea (2)
|