KEGG Orthology (KO)

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 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
     03020 RNA polymerase [PATH:ko03020]
       K03043  rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
       K13797  rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6]
       K03046  rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
       K03040  rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
       K03060  rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
       K03048  rpoE; DNA-directed RNA polymerase subunit delta
       K03044  rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
       K03045  rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
       K13798  rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
       K03041  rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
       K03042  rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
       K03047  rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
       K03056  rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
       K03049  rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
       K03051  rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
       K03052  rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
       K03053  rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
       K03055  rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
       K03058  rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
       K03059  rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
       K00960  rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
       K25274  RPO132; Poxviridae DNA-directed RNA polymerase 133 kDa subunit [EC:2.7.7.6]
       K25273  RPO147; Poxviridae DNA-directed RNA polymerase 147 kDa subunit [EC:2.7.7.6]
       K25278  RPO7; Poxviridae DNA-directed RNA polymerase 7 kDa subunit [EC:2.7.7.6]
       K25276  RPO35; Poxviridae DNA-directed RNA polymerase 35 kDa subunit [EC:2.7.7.6]
       K25275  RPO30; Poxviridae DNA-directed RNA polymerase 30 kDa subunit [EC:2.7.7.6]
       K25277  RPO22; Poxviridae DNA-directed RNA polymerase 22 kDa subunit [EC:2.7.7.6]
       K25279  RPO19; Poxviridae DNA-directed RNA polymerase 19 kDa subunit [EC:2.7.7.6]
       K21081  RPO18; Poxviridae DNA-directed RNA polymerase 18 kDa subunit [EC:2.7.7.6]
       K03010  RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
       K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
       K03011  RPB3, POLR2C; DNA-directed RNA polymerase II subunit RPB3
       K03008  RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11
       K03012  RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4
       K03015  RPB7, POLR2G; DNA-directed RNA polymerase II subunit RPB7
       K03017  RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
       K21987  POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A
       K03021  RPC2, POLR3B; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
       K03018  RPC1, POLR3A; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
       K03020  RPAC2, RPC19, POLR1D; DNA-directed RNA polymerases I and III subunit RPAC2
       K03027  RPAC1, RPC40, POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1
       K03023  RPC3, POLR3C; DNA-directed RNA polymerase III subunit RPC3
       K03026  RPC4, POLR3D; DNA-directed RNA polymerase III subunit RPC4
       K14721  RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5
       K03025  RPC6, POLR3F; DNA-directed RNA polymerase III subunit RPC6
       K03024  RPC7, POLR3G; DNA-directed RNA polymerase III subunit RPC7
       K03022  RPC8, POLR3H; DNA-directed RNA polymerase III subunit RPC8
       K25304  RPC9, CRCP; DNA-directed RNA polymerase III subunit RPC9
       K03019  RPC11, POLR3K; DNA-directed RNA polymerase III subunit RPC11
       K03002  RPA2, POLR1B; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
       K02999  RPA1, POLR1A; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
       K03000  RPA12, POLR1H, ZNRD1; DNA-directed RNA polymerase I subunit RPA12
       K03001  RPA14; DNA-directed RNA polymerase I subunit RPA14
       K03003  RPA34; DNA-directed RNA polymerase I subunit RPA34
       K25436  POLR1G; DNA-directed RNA polymerase I subunit RPA34
       K03004  RPA43, POLR1F, TWISTNB; DNA-directed RNA polymerase I subunit RPA43
       K03005  RPA49, POLR1E; DNA-directed RNA polymerase I subunit RPA49
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
       K16251  NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
       K16252  NRPD2, NRPE2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
       K16253  NRPD7, NRPE7; DNA-directed RNA polymerase IV and V subunit 7
     03022 Basal transcription factors [PATH:ko03022]
     03040 Spliceosome [PATH:ko03040]
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
   09151 Immune system
     04640 Hematopoietic cell lineage [PATH:ko04640]
     04610 Complement and coagulation cascades [PATH:ko04610]
     04611 Platelet activation [PATH:ko04611]
     04613 Neutrophil extracellular trap formation [PATH:ko04613]
     04620 Toll-like receptor signaling pathway [PATH:ko04620]
     04624 Toll and Imd signaling pathway [PATH:ko04624]
     04621 NOD-like receptor signaling pathway [PATH:ko04621]
     04622 RIG-I-like receptor signaling pathway [PATH:ko04622]
     04623 Cytosolic DNA-sensing pathway [PATH:ko04623]
       K03018  RPC1, POLR3A; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
       K03021  RPC2, POLR3B; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
       K03023  RPC3, POLR3C; DNA-directed RNA polymerase III subunit RPC3
       K03026  RPC4, POLR3D; DNA-directed RNA polymerase III subunit RPC4
       K14721  RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5
       K03027  RPAC1, RPC40, POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1
       K03019  RPC11, POLR3K; DNA-directed RNA polymerase III subunit RPC11
       K03020  RPAC2, RPC19, POLR1D; DNA-directed RNA polymerases I and III subunit RPAC2
       K03022  RPC8, POLR3H; DNA-directed RNA polymerase III subunit RPC8
       K03024  RPC7, POLR3G; DNA-directed RNA polymerase III subunit RPC7
       K03025  RPC6, POLR3F; DNA-directed RNA polymerase III subunit RPC6
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K12646  DDX58, RIG-I; ATP-dependent RNA helicase DDX58 [EC:3.6.4.13]
       K12648  MAVS, IPS1; mitochondrial antiviral-signaling protein
       K02580  NFKB1; nuclear factor NF-kappa-B p105 subunit
       K04735  RELA; transcription factor p65
       K05405  IL6; interleukin 6
       K12889  PCBP1; poly(rC)-binding protein 1
       K17265  G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.3 3.6.4.13]
       K27162  ZCCHC3; zinc finger CCHC domain-containing protein 3
       K17834  CGAS, MB21D1; cyclic GMP-AMP synthase [EC:2.7.7.86]
       K12654  STING1, TMEM173, MITA; stimulator of interferon genes protein
       K20027  ZDHHC1_11; palmitoyltransferase ZDHHC1/11 [EC:2.3.1.225]
       K13116  DDX41, ABS; ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
       K20914  IFI16; gamma-interferon-inducible protein 16
       K05410  TBK1; TANK-binding kinase 1 [EC:2.7.11.10]
       K07211  IKBKE, IKKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon [EC:2.7.11.10]
       K05411  IRF3; interferon regulatory factor 3
       K09447  IRF7; interferon regulatory factor 7
       K05414  IFNA; interferon alpha
       K05415  IFNB; interferon beta
       K12965  ZBP1, DAI; Z-DNA binding protein 1
       K02861  RIPK1, RIP1; receptor-interacting serine/threonine-protein kinase 1 [EC:2.7.11.1]
       K08847  RIPK3; receptor-interacting serine/threonine-protein kinase 3 [EC:2.7.11.1]
       K07210  IKBKG, IKKG, NEMO; inhibitor of nuclear factor kappa-B kinase subunit gamma
       K04467  IKBKA, IKKA, CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha [EC:2.7.11.10]
       K07209  IKBKB, IKKB; inhibitor of nuclear factor kappa-B kinase subunit beta [EC:2.7.11.10]
       K02581  NFKBIB; NF-kappa-B inhibitor beta
       K04734  NFKBIA; NF-kappa-B inhibitor alpha
       K12964  CCL4; C-C motif chemokine 4
       K12499  CCL5; C-C motif chemokine 5
       K12671  CXCL10, IP10; C-X-C motif chemokine 10
       K12966  AIM2; absent in melanoma 2
       K12800  NLRP3, PYPAF1; NACHT, LRR and PYD domains-containing protein 3
       K12803  MEFV; pyrin
       K02373  FADD; FAS-associated death domain protein
       K04398  CASP8; caspase 8 [EC:3.4.22.61]
       K12799  PYCARD, ASC; apoptosis-associated speck-like protein containing a CARD
       K01370  CASP1; caspase 1 [EC:3.4.22.36]
       K08849  MLKL; mixed lineage kinase domain-like [EC:2.7.11.1]
       K02187  CASP3; caspase 3 [EC:3.4.22.56]
       K04397  CASP7; caspase 7 [EC:3.4.22.60]
       K22146  GSDME, DFNA5; gasdermin-E
       K20917  GSDMD; gasdermin-D
       K04519  IL1B; interleukin 1 beta
       K05482  IL18, IL1F4; interleukin 18
       K12967  IL33; interleukin 33
       K12968  ADAR, ADAR1; double-stranded RNA-specific adenosine deaminase [EC:3.5.4.37]
       K22544  SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
       K10790  TREX1; three prime repair exonuclease 1 [EC:3.1.11.2]
       K01158  DNASE2; deoxyribonuclease II [EC:3.1.22.1]
       K12969  E3L; Poxviridae RNA-binding protein E3
       K12970  M45; Murid betaherpesvirus 1 ribonucleoside-diphosphate reductase [EC:1.17.4.1]
       K12971  IFI202; interferon-activable protein 202
     04625 C-type lectin receptor signaling pathway [PATH:ko04625]
     04650 Natural killer cell mediated cytotoxicity [PATH:ko04650]
     04612 Antigen processing and presentation [PATH:ko04612]
     04660 T cell receptor signaling pathway [PATH:ko04660]
     04658 Th1 and Th2 cell differentiation [PATH:ko04658]
     04659 Th17 cell differentiation [PATH:ko04659]
     04657 IL-17 signaling pathway [PATH:ko04657]
     04662 B cell receptor signaling pathway [PATH:ko04662]
     04664 Fc epsilon RI signaling pathway [PATH:ko04664]
     04666 Fc gamma R-mediated phagocytosis [PATH:ko04666]
     04670 Leukocyte transendothelial migration [PATH:ko04670]
     04672 Intestinal immune network for IgA production [PATH:ko04672]
     04062 Chemokine signaling pathway [PATH:ko04062]
 
   09152 Endocrine system
 
   09153 Circulatory system
 
   09154 Digestive system
 
   09155 Excretory system
 
   09156 Nervous system
 
   09157 Sensory system
 
   09158 Development and regeneration
 
   09149 Aging
 
   09159 Environmental adaptation
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ko03000]
     03021 Transcription machinery [BR:ko03021]
       K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
       K03010  RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
       K03011  RPB3, POLR2C; DNA-directed RNA polymerase II subunit RPB3
       K03008  RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11
       K03012  RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4
       K03015  RPB7, POLR2G; DNA-directed RNA polymerase II subunit RPB7
       K03017  RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
       K21987  POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
       K16251  NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
       K16252  NRPD2, NRPE2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
       K16253  NRPD7, NRPE7; DNA-directed RNA polymerase IV and V subunit 7
       K03122  TFIIA1, GTF2A1, TOA1; transcription initiation factor TFIIA large subunit
       K03123  TFIIA2, GTF2A2, TOA2; transcription initiation factor TFIIA small subunit
       K03124  TFIIB, GTF2B, SUA7, tfb; transcription initiation factor TFIIB
       K03120  TBP, tbp; transcription initiation factor TFIID TATA-box-binding protein
       K03125  TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
       K23358  TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]
       K03128  TAF2; transcription initiation factor TFIID subunit 2
       K14650  TAF3; transcription initiation factor TFIID subunit 3
       K03129  TAF4; transcription initiation factor TFIID subunit 4
       K03130  TAF5; transcription initiation factor TFIID subunit 5
       K03131  TAF6; transcription initiation factor TFIID subunit 6
       K03132  TAF7; transcription initiation factor TFIID subunit 7
       K14649  TAF8; transcription initiation factor TFIID subunit 8
       K14535  TAF9; transcription initiation factor TFIID subunit 9
       K03133  TAF9B, TAF9; transcription initiation factor TFIID subunit 9B
       K03134  TAF10; transcription initiation factor TFIID subunit 10
       K03135  TAF11; transcription initiation factor TFIID subunit 11
       K03126  TAF12; transcription initiation factor TFIID subunit 12
       K03127  TAF13; transcription initiation factor TFIID subunit 13
       K03140  TAF14; transcription initiation factor TFIID/TFIIF subunit
       K14651  TAF15, NPL3; transcription initiation factor TFIID subunit 15
       K03136  TFIIE1, GTF2E1, TFA1, tfe; transcription initiation factor TFIIE subunit alpha
       K03137  TFIIE2, GTF2E2, TFA2; transcription initiation factor TFIIE subunit beta
       K03138  TFIIF1, GTF2F1, TFG1; transcription initiation factor TFIIF subunit alpha
       K03139  TFIIF2, GTF2F2, TFG2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
       K03141  TFIIH1, GTF2H1, TFB1; transcription initiation factor TFIIH subunit 1
       K03142  TFIIH2, GTF2H2, SSL1; transcription initiation factor TFIIH subunit 2
       K03143  TFIIH3, GTF2H3, TFB4; transcription initiation factor TFIIH subunit 3
       K03144  TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4
       K10843  ERCC3, XPB; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
       K10844  ERCC2, XPD; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
       K10845  TTDA, GTF2H5, TFB5; TFIIH basal transcription factor complex TTD-A subunit
       K02202  CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
       K10842  MNAT1; CDK-activating kinase assembly factor MAT1
       K06634  CCNH; cyclin H
       K15128  MED6; mediator of RNA polymerase II transcription subunit 6
       K15129  MED8; mediator of RNA polymerase II transcription subunit 8
       K15130  MED8; mediator of RNA polymerase II transcription subunit 8, fungi type
       K15131  MED11; mediator of RNA polymerase II transcription subunit 11
       K15132  MED11; mediator of RNA polymerase II transcription subunit 11, fungi type
       K15133  MED17; mediator of RNA polymerase II transcription subunit 17
       K15134  SRB4, MED17; mediator of RNA polymerase II transcription subunit 17, fungi type
       K15135  MED18; mediator of RNA polymerase II transcription subunit 18
       K15136  SRB5, MED18; mediator of RNA polymerase II transcription subunit 18, fungi type
       K15137  MED19; mediator of RNA polymerase II transcription subunit 19
       K15138  ROX3, MED19; mediator of RNA polymerase II transcription subunit 19, fungi type
       K13528  MED20; mediator of RNA polymerase II transcription subunit 20
       K15139  MED22; mediator of RNA polymerase II transcription subunit 22
       K15140  SRB6, MED22; mediator of RNA polymerase II transcription subunit 22, fungi type
       K15141  MED28; mediator of RNA polymerase II transcription subunit 28
       K15142  MED29; mediator of RNA polymerase II transcription subunit 29
       K15143  MED30; mediator of RNA polymerase II transcription subunit 30
       K15144  MED1; mediator of RNA polymerase II transcription subunit 1
       K15145  MED1; mediator of RNA polymerase II transcription subunit 1, fungi type
       K15146  MED4; mediator of RNA polymerase II transcription subunit 4
       K15147  MED5, NUT1; mediator of RNA polymerase II transcription subunit 5
       K15148  MED7; mediator of RNA polymerase II transcription subunit 7
       K15149  MED9; mediator of RNA polymerase II transcription subunit 9
       K15150  CSE2, MED9; mediator of RNA polymerase II transcription subunit 9, fungi type
       K15151  MED10, NUT2; mediator of RNA polymerase II transcription subunit 10
       K15152  MED21, SRB7; mediator of RNA polymerase II transcription subunit 21
       K15153  MED31, SOH1; mediator of RNA polymerase II transcription subunit 31
       K15154  MED2; mediator of RNA polymerase II transcription subunit 2
       K15155  MED3, HRS1, PGD1; mediator of RNA polymerase II transcription subunit 3
       K15156  MED14, RGR1; mediator of RNA polymerase II transcription subunit 14
       K15157  MED15; mediator of RNA polymerase II transcription subunit 15
       K15158  GAL11, MED15; mediator of RNA polymerase II transcription subunit 15, fungi type
       K15159  MED16; mediator of RNA polymerase II transcription subunit 16
       K15160  SIN4, MED16; mediator of RNA polymerase II transcription subunit 16, fungi type
       K02208  CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
       K15161  CCNC, SSN8; cyclin-C
       K15162  MED12; mediator of RNA polymerase II transcription subunit 12
       K15163  SRB8, MED12; mediator of RNA polymerase II transcription subunit 12, fungi type
       K15164  MED13; mediator of RNA polymerase II transcription subunit 13
       K15165  SSN2, MED13; mediator of RNA polymerase II transcription subunit 13, fungi type
       K15166  MED23; mediator of RNA polymerase II transcription subunit 23
       K15167  MED24; mediator of RNA polymerase II transcription subunit 24
       K15168  MED25; mediator of RNA polymerase II transcription subunit 25
       K15169  MED26; mediator of RNA polymerase II transcription subunit 26
       K15170  MED27; mediator of RNA polymerase II transcription subunit 27
       K06062  PCAF, KAT2, GCN5; histone acetyltransferase [EC:2.3.1.48]
       K08874  TRRAP; transformation/transcription domain-associated protein
       K11313  SUPT3H, SPT3; transcription initiation protein SPT3
       K11359  SPT7; transcriptional activator SPT7
       K11360  SPT8; transcriptional activator SPT8
       K11361  SPT20, ADA5; transcription factor SPT20
       K11362  HFI1, ADA1; transcriptional coactivator HFI1/ADA1
       K11314  TADA2A, ADA2; transcriptional adapter 2-alpha
       K15127  TADA2B; transcriptional adapter 2-beta
       K11315  TADA3, ADA3, NGG1; transcriptional adapter 3
       K11317  TADA1, STAF42; transcriptional adapter 1
       K11363  SGF11; SAGA-associated factor 11
       K11364  SGF29; SAGA-associated factor 29
       K11365  SGF73; SAGA-associated factor 73
       K11316  SUPT7L; STAGA complex 65 subunit gamma
       K11318  ATXN7, SCA7; ataxin-7
       K11367  CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
       K11368  ENY2, DC6, SUS1; enhancer of yellow 2 transcription factor
       K11366  USP22_27_51, UBP8; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
       K12830  SF3B3, SAP130, RSE1; splicing factor 3B subunit 3
       K11647  SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
       K11648  SMARCB1, SNF5, INI1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
       K11649  SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
       K11650  SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
       K11651  SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
       K05692  ACTB_G1; actin beta/gamma 1
       K11340  ACTL6A, INO80K; actin-like protein 6A
       K11652  ACTL6B; actin-like protein 6B
       K11653  ARID1; AT-rich interactive domain-containing protein 1
       K11765  ARID2; AT-rich interactive domain-containing protein 2
       K11757  PBRM1, PB1; protein polybromo-1
       K11771  SWI1, ADR6; SWI/SNF chromatin-remodeling complex subunit SWI1
       K11786  STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
       K11772  SWI3; SWI/SNF complex subunit SWI3
       K11773  SNF6; SWI/SNF complex component SNF6
       K11774  SNF11; SWI/SNF complex component SNF11
       K11775  SNF12, SWP73; SWI/SNF complex component SWP73
       K11776  SWP82; SWI/SNF complex component SWP82
       K11767  ARP7, SWP61; actin-related protein 7
       K11768  ARP9, SWP59; actin-related protein 9
       K11756  RSC1_2; chromatin structure-remodeling complex subunit RSC1/2
       K11758  RSC3_30; chromatin structure-remodeling complex subunit RSC3/30
       K11759  RSC4; chromatin structure-remodeling complex subunit RSC4
       K11760  RSC6; chromatin structure-remodeling complex subunit RSC6
       K11761  NPL6, RSC7; chromatin structure-remodeling complex protein RSC7
       K11762  RSC8, SWH3, SSR2; chromatin structure-remodeling complex subunit RSC8
       K11763  RSC9; chromatin structure-remodeling complex subunit RSC9
       K11764  LDB7, RSC14; chromatin structure-remodeling complex protein RSC14
       K11766  RSC58; chromatin structure-remodeling complex subunit RSC58
       K11769  HTL1; chromatin structure-remodeling complex protein HTL1
       K11770  SFH1; chromatin structure-remodeling complex subunit SFH1
       K25815  SUB1; activated RNA polymerase II transcriptional coactivator p15
       K25827  CCAR1; cell division cycle and apoptosis regulator protein 1
       K25828  CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1
       K03145  TFIIS; transcription elongation factor S-II
       K15171  SUPT4H1, SPT4; transcription elongation factor SPT4
       K15172  SUPT5H, SPT5; transcription elongation factor SPT5
       K11292  SUPT6H, SPT6; transcription elongation factor SPT6
       K15173  TTF2; transcription termination factor 2 [EC:5.6.2.-]
       K14400  PCF11; pre-mRNA cleavage complex 2 protein Pcf11
       K14401  CPSF1, CFT1; cleavage and polyadenylation specificity factor subunit 1
       K14403  CPSF3, YSH1; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
       K14404  CPSF4, YTH1; cleavage and polyadenylation specificity factor subunit 4
       K06269  PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
       K06100  SYMPK; symplekin
       K15544  SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
       K12619  XRN2, RAT1; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
       K14845  RAI1, DOM3Z; RAT1-interacting protein
       K15559  RTT103; regulator of Ty1 transposition protein 103
       K13219  SFPQ, PSF; splicing factor, proline- and glutamine-rich
       K15560  NRD1; protein NRD1
       K13191  RBM16, SCAF8; RNA-binding protein 16
       K13167  SCAF4, SFRS15; SR-related and CTD-associated factor 4
       K15561  NAB3; nuclear polyadenylated RNA-binding protein 3
       K10706  SETX, ALS4; senataxin [EC:5.6.2.-]
       K09578  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
       K15174  PAF1; RNA polymerase II-associated factor 1
       K15175  CDC73; parafibromin
       K15176  CTR9; RNA polymerase-associated protein CTR9
       K15177  LEO1; RNA polymerase-associated protein LEO1
       K15178  RTF1; RNA polymerase-associated protein RTF1
       K15179  WHSC2, NELFA; negative elongation factor A
       K15180  COBRA1, NELFB; negative elongation factor B
       K15181  TH1L, NELFD; negative elongation factor C/D
       K15182  RDBP, NELFE; negative elongation factor E
       K15183  ELL; RNA polymerase II elongation factor ELL
       K15184  AFF1; AF4/FMR2 family member 1
       K15185  AFF4; AF4/FMR2 family member 4
       K15186  EAF; ELL-associated factor
       K15187  MLLT1_3, ENL, AF9; YEATS domain-containing protein 1/3
       K15188  CCNT; cyclin T
       K02211  CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
       K26143  ICE1; little elongation complex subunit 1
       K26144  ICE2; little elongation complex subunit 2
       K24388  ZC3H8; zinc finger CCCH domain-containing protein 8
       K11722  BRD4; bromodomain-containing protein 4
       K15562  BUR1, SGV1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23]
       K15563  BUR2; protein BUR2
       K00916  CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
       K15564  CTK2; CTD kinase subunit beta
       K15565  CTK3; CTD kinase subunit gamma
       K15189  HEXIM1_2; protein HEXIM1/2
       K15190  MEPCE, BCDIN3; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
       K15191  LARP7; La-related protein 7
       K25816  CCAR2, DBC1; cell cycle and apoptosis regulator protein 2
       K13204  ZNF326; zinc finger protein 326
       K03121  TFII-I, GTF2I; transcription initiation factor TFII-I
       K27274  GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1
       K15192  BTAF1, MOT1; TATA-binding protein-associated factor [EC:5.6.2.-]
       K21751  DR1, NC2-beta; down-regulator of transcription 1
       K21752  DRAP1, NC2-alpha; Dr1-associated corepressor
       K15193  SPTY2D1, SPT2; protein SPT2
       K15194  AFF2; AF4/FMR2 family member 2
       K15195  AFF3; AF4/FMR2 family member 3
       K15732  CTDP1, FCP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
       K18998  CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
       K18999  CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
       K15731  CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
       K17498  SPN1, IWS1; transcription factor SPN1
       K17494  CSRNP; cysteine/serine-rich nuclear protein
       K20826  RPAP1; RNA polymerase II-associated protein 1
       K20827  RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
       K23002  RPAP3; RNA polymerase II-associated protein 3
       K06666  TUP1; general transcriptional corepressor TUP1
       K06665  SSN6, CYC8; general transcriptional corepressor CYC8
       K12412  MCM1; pheromone receptor transcription factor
       K21388  AHR1; adhesion and hyphal regulator 1
       K23326  CCNK; cyclin K
       K24104  GPN; GPN-loop GTPase
       K26769  TCEAL1; transcription elongation factor A protein-like 1
       K03018  RPC1, POLR3A; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
       K03021  RPC2, POLR3B; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
       K03027  RPAC1, RPC40, POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1
       K03020  RPAC2, RPC19, POLR1D; DNA-directed RNA polymerases I and III subunit RPAC2
       K03023  RPC3, POLR3C; DNA-directed RNA polymerase III subunit RPC3
       K03026  RPC4, POLR3D; DNA-directed RNA polymerase III subunit RPC4
       K14721  RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5
       K03025  RPC6, POLR3F; DNA-directed RNA polymerase III subunit RPC6
       K03024  RPC7, POLR3G; DNA-directed RNA polymerase III subunit RPC7
       K03022  RPC8, POLR3H; DNA-directed RNA polymerase III subunit RPC8
       K25304  RPC9, CRCP; DNA-directed RNA polymerase III subunit RPC9
       K03019  RPC11, POLR3K; DNA-directed RNA polymerase III subunit RPC11
       K09191  GTF3A; general transcription factor IIIA
       K15196  BRF1, GTF3B; transcription factor IIIB 90 kDa subunit
       K15197  BRF2; transcription factor IIIB 50 kDa subunit
       K15198  BDP1, TFC5; transcription factor TFIIIB component B''
       K15199  GTF3C1; general transcription factor 3C polypeptide 1
       K15200  GTF3C2; general transcription factor 3C polypeptide 2
       K15201  GTP3C3, TFC4; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
       K11310  GTF3C4, KAT12; general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
       K15202  GTF3C5, TFC1; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
       K15203  GTF3C6; general transcription factor 3C polypeptide 6
       K15204  TFC3; transcription factor C subunit 3
       K15205  TFC6; transcription factor C subunit 6
       K15206  TFC7; transcription factor C subunit 7
       K15207  TFC8; transcription factor C subunit 8
       K15208  SNAPC1; snRNA-activating protein complex subunit 1
       K15209  SNAPC2; snRNA-activating protein complex subunit 2
       K15210  SNAPC3; snRNA-activating protein complex subunit 3
       K09453  SNAPC4; snRNA-activating protein complex subunit 4
       K15211  SNAPC5; snRNA-activating protein complex subunit 5
       K09364  POU2F, OTF; POU domain transcription factor, class 2
       K09367  POU5F; POU domain transcription factor, class 5
       K20828  ZNF143_76, STAF; zinc finger protein 143/76
       K25817  MAF1; repressor of RNA polymerase III transcription MAF1
       K02999  RPA1, POLR1A; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
       K03002  RPA2, POLR1B; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
       K03005  RPA49, POLR1E; DNA-directed RNA polymerase I subunit RPA49
       K03004  RPA43, POLR1F, TWISTNB; DNA-directed RNA polymerase I subunit RPA43
       K25436  POLR1G; DNA-directed RNA polymerase I subunit RPA34
       K03003  RPA34; DNA-directed RNA polymerase I subunit RPA34
       K03000  RPA12, POLR1H, ZNRD1; DNA-directed RNA polymerase I subunit RPA12
       K03001  RPA14; DNA-directed RNA polymerase I subunit RPA14
       K15212  TAF1A, SL1; TATA box-binding protein-associated factor RNA polymerase I subunit A
       K15213  TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B
       K15214  TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C
       K15215  TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D
       K09273  UBTF; upstream-binding transcription factor
       K15216  RRN3, TIFIA; RNA polymerase I-specific transcription initiation factor RRN3
       K15217  RRN5; RNA polymerase I-specific transcription initiation factor RRN5
       K15218  RRN6; RNA polymerase I-specific transcription initiation factor RRN6
       K15219  RRN7; RNA polymerase I-specific transcription initiation factor RRN7
       K15220  RRN9; RNA polymerase I-specific transcription initiation factor RRN9
       K15221  RRN10; RNA polymerase I-specific transcription initiation factor RRN10
       K15222  RRN11; RNA polymerase I-specific transcription initiation factor RRN11
       K15223  UAF30, SPP27; upstream activation factor subunit UAF30
       K11654  SMARCA5, SNF2H, ISWI; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
       K15224  BAZ2A, TIP5; bromodomain adjacent to zinc finger domain protein 2A
       K15225  TTF1; transcription termination factor 1
       K19387  PTRF; polymerase I and transcript release factor
       K25818  NOLC1; nucleolar and coiled-body phosphoprotein 1
       K03040  rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
       K03043  rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
       K03046  rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
       K13797  rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6]
       K03048  rpoE; DNA-directed RNA polymerase subunit delta
       K03060  rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
       K03086  rpoD; RNA polymerase primary sigma factor
       K03087  rpoS; RNA polymerase nonessential primary-like sigma factor
       K03088  rpoE; RNA polymerase sigma-70 factor, ECF subfamily
       K23514  fecI, prhI; RNA polymerase sigma-19 factor, ECF subfamily
       K24073  cnrH; RNA polymerase sigma factor CnrH
       K03089  rpoH; RNA polymerase sigma-32 factor
       K03090  sigB; RNA polymerase sigma-B factor
       K03091  sigE_F_G; RNA polymerase sigma-E/F/G factor
       K27000  sigH; RNA polymerase sigma-H factor
       K03093  sigI; RNA polymerase sigma-I factor
       K26992  sigO; RNA polymerase sigma-O factor
       K03092  rpoN; RNA polymerase sigma-54 factor
       K02405  fliA, whiG; RNA polymerase sigma factor FliA
       K24072  xpf; positive control factor
       K03580  hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
       K02600  nusA; transcription termination/antitermination protein NusA
       K03625  nusB; transcription antitermination protein NusB
       K02601  nusG; transcription termination/antitermination protein NusG
       K03599  sspA, mglA; stringent starvation protein A
       K03600  sspB; stringent starvation protein B
       K17752  rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
       K17762  rsbS; rsbT antagonist protein RsbS
       K17763  rsbR; rsbT co-antagonist protein RsbR
       K07315  rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
       K19707  rsbQ; sigma-B regulation protein RsbQ
       K05518  rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
       K04749  rsbV; anti-sigma B factor antagonist
       K04757  rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
       K03597  rseA; sigma-E factor negative regulatory protein RseA
       K03598  rseB; sigma-E factor negative regulatory protein RseB
       K03803  rseC; sigma-E factor negative regulatory protein RseC
       K06204  dksA; RNA polymerase-binding transcription factor
       K03624  greA; transcription elongation factor GreA
       K04760  greB; transcription elongation factor GreB
       K03628  rho; transcription termination factor Rho
       K19000  rof; Rho-binding antiterminator
       K03041  rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
       K03042  rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
       K03044  rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
       K03045  rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
       K13798  rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
       K03047  rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
       K03049  rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
       K03051  rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
       K03052  rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
       K03053  rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
       K03054  rpoI; DNA-directed RNA polymerase subunit I [EC:2.7.7.6]
       K03055  rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
       K03056  rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
       K03058  rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
       K03059  rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
       K00960  rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
       K03057  tfs; transcription factor S
     03019 Messenger RNA biogenesis [BR:ko03019]
     03041 Spliceosome [BR:ko03041]
     03011 Ribosome [BR:ko03011]
     03009 Ribosome biogenesis [BR:ko03009]
     03016 Transfer RNA biogenesis [BR:ko03016]
     03012 Translation factors [BR:ko03012]
     03110 Chaperones and folding catalysts [BR:ko03110]
     04131 Membrane trafficking [BR:ko04131]
     04121 Ubiquitin system [BR:ko04121]
     03051 Proteasome [BR:ko03051]
     03032 DNA replication proteins [BR:ko03032]
     03036 Chromosome and associated proteins [BR:ko03036]
     03400 DNA repair and recombination proteins [BR:ko03400]
     03029 Mitochondrial biogenesis [BR:ko03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: March 17, 2024