KEGG Orthology (KO)

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 Metabolism
 
 Genetic Information Processing
 
   Transcription
 
   Translation
 
   Folding, sorting and degradation
 
   Replication and repair
     03030 DNA replication [PATH:ko03030]
     03032 DNA replication proteins [BR:ko03032]
     03036 Chromosome and associated proteins [BR:ko03036]
     03410 Base excision repair [PATH:ko03410]
     03420 Nucleotide excision repair [PATH:ko03420]
     03430 Mismatch repair [PATH:ko03430]
     03440 Homologous recombination [PATH:ko03440]
       K07462  recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
       K03111  ssb; single-strand DNA-binding protein
       K03629  recF; DNA replication and repair protein RecF
       K03584  recO; DNA repair protein RecO (recombination protein O)
       K06187  recR; recombination protein RecR
       K03553  recA; recombination protein RecA
       K02335  DPO1, polA; DNA polymerase I [EC:2.7.7.7]
       K03550  ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
       K03551  ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
       K01159  ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
       K03655  recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
       K03582  recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
       K03583  recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
       K03581  recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
       K02337  DPO3A1, dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
       K03763  DPO3A2, polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
       K02338  DPO3B, dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
       K02343  DPO3G, dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
       K02340  DPO3D1, holA; DNA polymerase III subunit delta [EC:2.7.7.7]
       K02341  DPO3D2, holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
       K02342  DPO3E, dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
       K14159  rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
       K02345  DPO3T, holE; DNA polymerase III subunit theta [EC:2.7.7.7]
       K02339  DPO3C, holC; DNA polymerase III subunit chi [EC:2.7.7.7]
       K02344  DPO3P, holD; DNA polymerase III subunit psi [EC:2.7.7.7]
       K04066  priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
       K02686  priB; primosomal replication protein N
       K04067  priC; primosomal replication protein N''
       K02317  dnaT; DNA replication protein DnaT
       K10866  RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
       K10865  MRE11; double-strand break repair protein MRE11
       K10868  XRS2; DNA repair protein XRS2
       K10867  NBN, NBS1; nijmegen breakage syndrome protein 1
       K10957  RAD55; DNA repair protein RAD55
       K10958  RAD57; DNA repair protein RAD57
       K07466  RFA1, RPA1, rpa; replication factor A1
       K10739  RFA2, RPA2; replication factor A2
       K10740  RPA3; replication factor A3
       K10741  RPA4; replication factor A4
       K04482  RAD51; DNA repair protein RAD51
       K10873  RAD52; DNA repair and recombination protein RAD52
       K08775  BRCA2, FANCD1; breast cancer 2 susceptibility protein
       K10881  SHFM1, DSS1; 26 proteasome complex subunit DSS1
       K10869  RAD51L1, RAD51B; RAD51-like protein 1
       K10870  RAD51L2, RAD51C; RAD51-like protein 2
       K10871  RAD51L3, RAD51D; RAD51-like protein 3
       K10879  XRCC2; DNA-repair protein XRCC2
       K10880  XRCC3; DNA-repair protein XRCC3
       K10959  RAD59; DNA repair protein RAD59
       K10875  RAD54L, RAD54; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]
       K10877  RAD54B; DNA repair and recombination protein RAD54B [EC:3.6.4.-]
       K02327  POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
       K02328  POLD2; DNA polymerase delta subunit 2
       K03504  POLD3; DNA polymerase delta subunit 3
       K03505  POLD4; DNA polymerase delta subunit 4
       K10901  BLM, RECQL3, SGS1; bloom syndrome protein [EC:3.6.4.12]
       K03165  TOP3; DNA topoisomerase III [EC:5.99.1.2]
       K08991  MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
       K10882  EME1, MMS4; crossover junction endonuclease EME1 [EC:3.1.22.-]
     03450 Non-homologous end-joining [PATH:ko03450]
     03460 Fanconi anemia pathway [PATH:ko03460]
     03400 DNA repair and recombination proteins [BR:ko03400]
 
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Last updated: August 26, 2014