KEGG Modules

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 Pathway module
 
   Energy metabolism
     Carbon fixation
       M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:map01200 map00710]
       M00166  Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P [PATH:map01200 map00710]
       M00167  Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P [PATH:map01200 map00710]
       M00168  CAM (Crassulacean acid metabolism), dark [PATH:map01200 map00710]
       M00169  CAM (Crassulacean acid metabolism), light [PATH:map01200 map00710]
       M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:map01200 map00710]
       M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:map01200 map00710]
       M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:map01200 map00710]
       M00173  Reductive citrate cycle (Arnon-Buchanan cycle) [PATH:map01200 map00720]
         K00169  porA; pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1]
         K00170  porB; pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1]
         K00171  porD; pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1]
         K00172  porG; pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1]
         K03737  nifJ; putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-]
         K01007  pps, ppsA; pyruvate, water dikinase [EC:2.7.9.2]
         K01006  ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
         K01595  ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
         K01959  pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
         K01960  pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
         K01958  PC, pyc; pyruvate carboxylase [EC:6.4.1.1]
         K00024  mdh; malate dehydrogenase [EC:1.1.1.37]
         K01676  E4.2.1.2A, fumA, fumB; fumarate hydratase, class I [EC:4.2.1.2]
         K01679  E4.2.1.2B, fumC; fumarate hydratase, class II [EC:4.2.1.2]
         K01677  E4.2.1.2AA, fumA; fumarate hydratase subunit alpha [EC:4.2.1.2]
         K01678  E4.2.1.2AB, fumB; fumarate hydratase subunit beta [EC:4.2.1.2]
         K00239  sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
         K00240  sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
         K00241  sdhC; succinate dehydrogenase cytochrome b556 subunit
         K00242  sdhD; succinate dehydrogenase membrane anchor subunit
         K00244  frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
         K00245  frdB; fumarate reductase iron-sulfur subunit [EC:1.3.5.4]
         K00246  frdC; fumarate reductase subunit C
         K00247  frdD; fumarate reductase subunit D
         K01902  sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
         K01903  sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
         K00174  korA, oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
         K00175  korB, oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
         K00177  korC, oorC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
         K00176  korD, oorD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
         K00031  IDH1, IDH2, icd; isocitrate dehydrogenase [EC:1.1.1.42]
         K01681  ACO, acnA; aconitate hydratase [EC:4.2.1.3]
         K01682  acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
         K15230  aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
         K15231  aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
         K15232  ccsA; citryl-CoA synthetase large subunit [EC:6.2.1.18]
         K15233  ccsB; citryl-CoA synthetase small subunit
         K15234  ccl; citryl-CoA lyase [EC:4.1.3.34]
       M00376  3-Hydroxypropionate bi-cycle [PATH:map01200 map00720]
       M00375  Hydroxypropionate-hydroxybutylate cycle [PATH:map01200 map00720]
       M00374  Dicarboxylate-hydroxybutyrate cycle [PATH:map01200 map00720]
         K00169  porA; pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1]
         K00170  porB; pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1]
         K00171  porD; pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1]
         K00172  porG; pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1]
         K03737  nifJ; putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-]
         K01007  pps, ppsA; pyruvate, water dikinase [EC:2.7.9.2]
         K01595  ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
         K00024  mdh; malate dehydrogenase [EC:1.1.1.37]
         K01676  E4.2.1.2A, fumA, fumB; fumarate hydratase, class I [EC:4.2.1.2]
         K01679  E4.2.1.2B, fumC; fumarate hydratase, class II [EC:4.2.1.2]
         K01677  E4.2.1.2AA, fumA; fumarate hydratase subunit alpha [EC:4.2.1.2]
         K01678  E4.2.1.2AB, fumB; fumarate hydratase subunit beta [EC:4.2.1.2]
         K00239  sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
         K00240  sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
         K00241  sdhC; succinate dehydrogenase cytochrome b556 subunit
         K00242  sdhD; succinate dehydrogenase membrane anchor subunit
         K00244  frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
         K00245  frdB; fumarate reductase iron-sulfur subunit [EC:1.3.5.4]
         K00246  frdC; fumarate reductase subunit C
         K00247  frdD; fumarate reductase subunit D
         K01902  sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
         K01903  sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
         K15038  K15038; succinyl-CoA reductase [EC:1.2.1.76]
         K15017  K15017; malonyl-CoA/succinyl-CoA reductase (NADPH) [EC:1.2.1.75 1.2.1.76]
         K14465  K14465; succinate semialdehyde reductase (NADPH) [EC:1.1.1.-]
         K14466  K14466; 4-hydroxybutyryl-CoA synthetase (4-hydroxybutyrate-CoA ligase, AMP-forming) [EC:6.2.1.-]
         K14467  K14467; 4-hydroxybutyryl-CoA synthetase (4-hydroxybutyrate-CoA ligase, AMP-forming) [EC:6.2.1.-]
         K14534  abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
         K15016  K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
         K01715  crt; enoyl-CoA hydratase [EC:4.2.1.17]
         K01782  fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
         K01825  fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
         K07516  fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
         K00626  E2.3.1.9, atoB; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
       M00377  Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway) [PATH:map01200 map00720]
       M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:map01200 map00720]
     Nitrogen metabolism
     Methane metabolism
     Sulfur metabolism
 
   Carbohydrate and lipid metabolism
     Central carbohydrate metabolism
       M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:map01200 map00010]
       M00002  Glycolysis, core module involving three-carbon compounds [PATH:map01200 map01230 map00010]
       M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:map00010 map00020]
       M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:map01200 map00010 map00020 map00620]
         K00163  aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
         K00161  PDHA, pdhA; pyruvate dehydrogenase E1 component alpha subunit [EC:1.2.4.1]
         K00162  PDHB, pdhB; pyruvate dehydrogenase E1 component beta subunit [EC:1.2.4.1]
         K00627  DLAT, aceF, pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
         K00382  DLD, lpd, pdhD; dihydrolipoamide dehydrogenase [EC:1.8.1.4]
         K00169  porA; pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1]
         K00170  porB; pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1]
         K00171  porD; pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1]
         K00172  porG; pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1]
       M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:map01200 map00020]
       M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:map01200 map01210 map01230 map00020]
       M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:map01200 map00020]
       M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:map01200 map00030]
       M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:map01200 map00030]
       M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:map01200 map01230 map00030]
       M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:map01200 map01230 map00030]
       M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:map01200 map01230 map00030 map00230]
       M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:map01200 map00030]
       M00308  Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P [PATH:map01200 map00030]
       M00633  Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P [PATH:map01200 map00030 map00052]
       M00309  Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH:map01200 map00030 map00052]
     Other carbohydrate metabolism
     Fatty acid metabolism
     Lipid metabolism
     Lipopolysaccharide metabolism
     Sugar metabolism
     Glycan metabolism
     Glycosaminoglycan metabolism
     Terpenoid backbone biosynthesis
     Sterol biosynthesis
     Other terpenoid biosynthesis
 
   Nucleotide and amino acid metabolism
 
   Secondary metabolism
 
 Structural complex
 
 Functional set
 
 Signature module

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Last updated: July 25, 2014