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 Pathway module
 
   Energy metabolism
     Carbon fixation
       M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:map01200 map00710]
       M00166  Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P [PATH:map01200 map00710]
       M00167  Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P [PATH:map01200 map00710]
       M00168  CAM (Crassulacean acid metabolism), dark [PATH:map01200 map00710]
       M00169  CAM (Crassulacean acid metabolism), light [PATH:map01200 map00710]
       M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:map01200 map00710]
       M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:map01200 map00710]
       M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:map01200 map00710]
       M00173  Reductive citrate cycle (Arnon-Buchanan cycle) [PATH:map01200 map00720]
         K00169  porA; pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1]
         K00170  porB; pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1]
         K00171  porD; pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1]
         K00172  porG; pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1]
         K03737  nifJ; putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-]
         K01007  pps, ppsA; pyruvate, water dikinase [EC:2.7.9.2]
         K01006  ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
         K01595  ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
         K01959  pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
         K01960  pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
         K01958  PC, pyc; pyruvate carboxylase [EC:6.4.1.1]
         K00024  mdh; malate dehydrogenase [EC:1.1.1.37]
         K01676  E4.2.1.2A, fumA, fumB; fumarate hydratase, class I [EC:4.2.1.2]
         K01679  E4.2.1.2B, fumC; fumarate hydratase, class II [EC:4.2.1.2]
         K01677  E4.2.1.2AA, fumA; fumarate hydratase subunit alpha [EC:4.2.1.2]
         K01678  E4.2.1.2AB, fumB; fumarate hydratase subunit beta [EC:4.2.1.2]
         K00239  sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
         K00240  sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
         K00241  sdhC; succinate dehydrogenase cytochrome b556 subunit
         K00242  sdhD; succinate dehydrogenase membrane anchor subunit
         K00244  frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
         K00245  frdB; fumarate reductase iron-sulfur subunit [EC:1.3.5.4]
         K00246  frdC; fumarate reductase subunit C
         K00247  frdD; fumarate reductase subunit D
         K18556  frdA; NADH-dependent fumarate reductase subunit A [EC:1.3.1.6]
         K18557  frdB; NADH-dependent fumarate reductase subunit B [EC:1.3.1.6]
         K18558  frdC; NADH-dependent fumarate reductase subunit C
         K18559  frdD; NADH-dependent fumarate reductase subunit D
         K18560  frdE; NADH-dependent fumarate reductase subunit E
         K01902  sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
         K01903  sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
         K00174  korA, oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
         K00175  korB, oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
         K00177  korC, oorC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
         K00176  korD, oorD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
         K00031  IDH1, IDH2, icd; isocitrate dehydrogenase [EC:1.1.1.42]
         K01681  ACO, acnA; aconitate hydratase [EC:4.2.1.3]
         K01682  acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
         K15230  aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
         K15231  aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
         K15232  ccsA; citryl-CoA synthetase large subunit [EC:6.2.1.18]
         K15233  ccsB; citryl-CoA synthetase small subunit
         K15234  ccl; citryl-CoA lyase [EC:4.1.3.34]
       M00376  3-Hydroxypropionate bi-cycle [PATH:map01200 map00720]
       M00375  Hydroxypropionate-hydroxybutylate cycle [PATH:map01200 map00720]
       M00374  Dicarboxylate-hydroxybutyrate cycle [PATH:map01200 map00720]
         K00169  porA; pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1]
         K00170  porB; pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1]
         K00171  porD; pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1]
         K00172  porG; pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1]
         K01007  pps, ppsA; pyruvate, water dikinase [EC:2.7.9.2]
         K01595  ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
         K00024  mdh; malate dehydrogenase [EC:1.1.1.37]
         K01676  E4.2.1.2A, fumA, fumB; fumarate hydratase, class I [EC:4.2.1.2]
         K01679  E4.2.1.2B, fumC; fumarate hydratase, class II [EC:4.2.1.2]
         K01677  E4.2.1.2AA, fumA; fumarate hydratase subunit alpha [EC:4.2.1.2]
         K01678  E4.2.1.2AB, fumB; fumarate hydratase subunit beta [EC:4.2.1.2]
         K00239  sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
         K00240  sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
         K00241  sdhC; succinate dehydrogenase cytochrome b556 subunit
         K00242  sdhD; succinate dehydrogenase membrane anchor subunit
         K00244  frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
         K00245  frdB; fumarate reductase iron-sulfur subunit [EC:1.3.5.4]
         K00246  frdC; fumarate reductase subunit C
         K00247  frdD; fumarate reductase subunit D
         K01902  sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
         K01903  sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
         K15038  K15038; succinyl-CoA reductase [EC:1.2.1.76]
         K15017  K15017; malonyl-CoA/succinyl-CoA reductase (NADPH) [EC:1.2.1.75 1.2.1.76]
         K14465  K14465; succinate semialdehyde reductase (NADPH) [EC:1.1.1.-]
         K14466  K14466; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40]
         K14467  4hbl; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40]
         K14534  abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
         K15016  K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
         K00626  E2.3.1.9, atoB; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
       M00377  Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway) [PATH:map01200 map00720]
       M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:map01200 map00720]
     Nitrogen metabolism
     Methane metabolism
     Sulfur metabolism
 
   Carbohydrate and lipid metabolism
     Central carbohydrate metabolism
       M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:map01200 map00010]
       M00002  Glycolysis, core module involving three-carbon compounds [PATH:map01200 map01230 map00010]
       M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:map00010 map00020]
       M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:map01200 map00010 map00020 map00620]
       M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:map01200 map00020]
         K01647  CS, gltA; citrate synthase [EC:2.3.3.1]
         K01681  ACO, acnA; aconitate hydratase [EC:4.2.1.3]
         K01682  acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
         K00031  IDH1, IDH2, icd; isocitrate dehydrogenase [EC:1.1.1.42]
         K00030  IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
         K00164  OGDH, sucA; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
         K00658  DLST, sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
         K00382  DLD, lpd, pdhD; dihydrolipoamide dehydrogenase [EC:1.8.1.4]
         K00174  korA, oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
         K00175  korB, oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
         K00177  korC, oorC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
         K00176  korD, oorD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
         K01902  sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
         K01903  sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
         K01899  LSC1; succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5]
         K01900  LSC2; succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5]
         K18118  aarC, cat1; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
         K00234  SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
         K00235  SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]
         K00236  SDHC, SDH3; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
         K00237  SDHD, SDH4; succinate dehydrogenase (ubiquinone) membrane anchor subunit
         K00239  sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
         K00240  sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
         K00241  sdhC; succinate dehydrogenase cytochrome b556 subunit
         K00242  sdhD; succinate dehydrogenase membrane anchor subunit
         K00244  frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
         K00245  frdB; fumarate reductase iron-sulfur subunit [EC:1.3.5.4]
         K00246  frdC; fumarate reductase subunit C
         K00247  frdD; fumarate reductase subunit D
         K01676  E4.2.1.2A, fumA, fumB; fumarate hydratase, class I [EC:4.2.1.2]
         K01679  E4.2.1.2B, fumC; fumarate hydratase, class II [EC:4.2.1.2]
         K01677  E4.2.1.2AA, fumA; fumarate hydratase subunit alpha [EC:4.2.1.2]
         K01678  E4.2.1.2AB, fumB; fumarate hydratase subunit beta [EC:4.2.1.2]
         K00026  MDH2; malate dehydrogenase [EC:1.1.1.37]
         K00025  MDH1; malate dehydrogenase [EC:1.1.1.37]
         K00024  mdh; malate dehydrogenase [EC:1.1.1.37]
         K00116  mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
       M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:map01200 map01210 map01230 map00020]
       M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:map01200 map00020]
         K00164  OGDH, sucA; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
         K00658  DLST, sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
         K00382  DLD, lpd, pdhD; dihydrolipoamide dehydrogenase [EC:1.8.1.4]
         K00174  korA, oorA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
         K00175  korB, oorB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
         K00177  korC, oorC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
         K00176  korD, oorD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
         K01902  sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
         K01903  sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
         K01899  LSC1; succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5]
         K01900  LSC2; succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5]
         K18118  aarC, cat1; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
         K00234  SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
         K00235  SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]
         K00236  SDHC, SDH3; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
         K00237  SDHD, SDH4; succinate dehydrogenase (ubiquinone) membrane anchor subunit
         K00239  sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
         K00240  sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
         K00241  sdhC; succinate dehydrogenase cytochrome b556 subunit
         K00242  sdhD; succinate dehydrogenase membrane anchor subunit
         K00244  frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
         K00245  frdB; fumarate reductase iron-sulfur subunit [EC:1.3.5.4]
         K00246  frdC; fumarate reductase subunit C
         K00247  frdD; fumarate reductase subunit D
         K01676  E4.2.1.2A, fumA, fumB; fumarate hydratase, class I [EC:4.2.1.2]
         K01679  E4.2.1.2B, fumC; fumarate hydratase, class II [EC:4.2.1.2]
         K01677  E4.2.1.2AA, fumA; fumarate hydratase subunit alpha [EC:4.2.1.2]
         K01678  E4.2.1.2AB, fumB; fumarate hydratase subunit beta [EC:4.2.1.2]
         K00026  MDH2; malate dehydrogenase [EC:1.1.1.37]
         K00025  MDH1; malate dehydrogenase [EC:1.1.1.37]
         K00024  mdh; malate dehydrogenase [EC:1.1.1.37]
         K00116  mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
       M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:map01200 map00030]
       M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:map01200 map00030]
       M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:map01200 map01230 map00030]
       M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:map01200 map01230 map00030]
       M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:map01200 map01230 map00030 map00230]
       M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:map01200 map00030]
       M00308  Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P [PATH:map01200 map00030]
       M00633  Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P [PATH:map01200 map00030 map00052]
       M00309  Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH:map01200 map00030 map00052]
     Other carbohydrate metabolism
     Fatty acid metabolism
     Lipid metabolism
     Lipopolysaccharide metabolism
     Sugar metabolism
     Glycan metabolism
     Glycosaminoglycan metabolism
     Terpenoid backbone biosynthesis
     Sterol biosynthesis
     Other terpenoid biosynthesis
 
   Nucleotide and amino acid metabolism
 
   Secondary metabolism
 
 Structural complex
 
   Energy metabolism
     Photosynthesis
     ATP synthesis
       M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:map00190]
       M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:map00190]
       M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:map00190]
       M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:map00190]
       M00146  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [PATH:map00190]
       M00147  NADH dehydrogenase (ubiquinone) 1 beta subcomplex [PATH:map00190]
       M00149  Succinate dehydrogenase, prokaryotes [PATH:map00190]
         K00241  sdhC; succinate dehydrogenase cytochrome b556 subunit
         K00242  sdhD; succinate dehydrogenase membrane anchor subunit
         K00239  sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
         K00240  sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
       M00150  Fumarate reductase, prokaryotes [PATH:map00190]
       M00148  Succinate dehydrogenase (ubiquinone) [PATH:map00190]
       M00162  Cytochrome b6f complex [PATH:map00195]
       M00151  Cytochrome bc1 complex respiratory unit [PATH:map00190]
       M00152  Cytochrome bc1 complex [PATH:map00190]
       M00154  Cytochrome c oxidase [PATH:map00190]
       M00155  Cytochrome c oxidase, prokaryotes [PATH:map00190]
       M00153  Cytochrome d ubiquinol oxidase [PATH:map00190]
       M00417  Cytochrome o ubiquinol oxidase [PATH:map00190]
       M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:map00190]
       M00156  Cytochrome c oxidase, cbb3-type [PATH:map00190]
       M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:map00190 map00195]
       M00158  F-type ATPase, eukaryotes [PATH:map00190]
       M00159  V-type ATPase, prokaryotes [PATH:map00190]
       M00160  V-type ATPase, eukaryotes [PATH:map00190]
 
   Genetic information processing
 
   Environmental information processing
 
 Functional set
 
 Signature module

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Last updated: December 15, 2014