Eukaryotic type
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Basic leucine zipper (bZIP)
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Basic helix-loop-helix (bHLH)
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Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
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Other basic domains
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Zinc finger
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Helix-turn-helix
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Homeo domain ANTP: HOXL
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Homeo domain ANTP: NKL
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Homeo domain Paired-related
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Homeo domain LIM
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Homeo domain POU
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Homeo domain SINE
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Homeo domain ZF
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Homeo domain CUT
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Homeo domain PROS
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Homeo domain TALE
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Homeo domain other
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Fork head/winged helix developmental regulators
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K08035 FOXA2, HNF3B; forkhead box protein A2, hepatocyte nuclear factor 3-beta
K09396 FOXC; forkhead box protein C
K09385 FOXG; forkhead box protein G
K09407 FOXN; forkhead box protein N
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Fork head/winged helix tissue-specific regulators
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Fork head/winged helix cell cycle-controlling factors, E2F
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Fork head/winged helix cell cycle-controlling factors, DP
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Fork head/winged helix other regulators
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Heat shock factors
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Tryptophan clusters Myb, Myb-factors
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Tryptophan clusters Myb, Myb-like factors
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Tryptophan clusters Ets-type
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Tryptophan clusters interferon-regulating factors
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TEA domain
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ARID
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beta-Scaffold factors with minor groove contacts
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Other transcription factors
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Prokaryotic type
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