 Eukaryotic Type
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 Basic leucine zipper (bZIP)
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Basic helix-loop-helix (bHLH)
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Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
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Other basic domains
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Zinc finger
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Cys4 thyroid hormone-like
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Cys4 hepatocyte nuclear factor 4-like
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Cys4 estrogen-like
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Cys4 nerve growth factor IB-like
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Cys4 Fushi tarazu-F1-like
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Cys4 germ cell nuclear factor
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Cys4 Knirps/DAX 1-like
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Cys4 GATA-factors
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Cys4 Trithorax
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Other Cys4 zinc finger factors
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Cys2His2 ubiquitous factors
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Cys2His2 developmental/cell cycle regulators, Egr/Krox
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 K09202 SWI5; regulatory protein SWI5
K09203 EGR1; early growth response protein 1
K12496 EGR2; early growth response protein 2
K12497 EGR3; early growth response protein 3
K12498 EGR4; early growth response protein 4
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Cys2His2 developmental/cell cycle regulators, Krueppel-like
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Cys2His2 developmental/cell cycle regulators, GLI-like
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Cys2His2 developmental/cell cycle regulators, Others
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Cys2His2 metabolic regulators in fungi
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Cys2His2 large factors with NF-6B-like binding properties
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Cys6 metabolic regulators in fungi
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Cys4HisCys3 PHD fingers
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Zinc fingers of alternating composition
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Helix-turn-helix
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beta-Scaffold factors with minor groove contacts
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Other transcription factors
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Prokaryotic Type
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Transcription Factors