Chromosome and associated proteins

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 Eukaryotic Type
   Sister chromatid cohesion proteins
   Nucleosome assembly factors
   Histone modification proteins
     HATs (histone acetyltransferases)
     HAT complexes
     HDACs (histone deacetylases)
       Class I HDACs
         K06067  HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
         K11404  HDAC3; histone deacetylase 3 [EC:3.5.1.98]
         K11405  HDAC8; histone deacetylase 8 [EC:3.5.1.98]
         K11482  HOS1; histone deacetylase HOS1 [EC:3.5.1.98]
         K11483  HOS2; histone deacetylase HOS2 [EC:3.5.1.98]
         K11484  HOS3; histone deacetylase HOS3 [EC:3.5.1.98]
       Class II HDACs
       SIRTs (sirtuins, class III HDACs)
       Class IV HDACs
     HMTs (histone methyltransferases)
     HMT complexes
     Histone demethylases
     Polycomb group proteins
     Sir proteins
     Other histone modification proteins
   Chromosome condensation proteins
   Centromeric chromatin formation proteins
   Heterochromatin formation proteins
     HP1 (heterochromatin protein 1)
     MBPs (metylated DNA binding proteins)
     Other heterochromatin formation proteins
       K00558  DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
       K17398  DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
       K17399  DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
       K17400  DNMT3L; DNA (cytosine-5)-methyltransferase 3-like
       K06067  HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
       K11642  CHD3, MI2A; chromodomain-helicase-DNA-binding protein 3 [EC:3.6.4.12]
       K11643  CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12]
       K10752  RBBP4, HAT2, CAF1, MIS16; histone-binding protein RBBP4
       K11421  SETDB1; histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
       K18494  SETDB2; histone-lysine N-methyltransferase SETDB2 [EC:2.1.1.43]
       K11644  SIN3A; paired amphipathic helix protein Sin3a
       K11419  SUV39H, CLR4; histone-lysine N-methyltransferase SUV39H [EC:2.1.1.43]
   RNA silencing
   Centrosomal proteins
   Spindle formation proteins
   Sister chromatid separation proteins
   Chromatin remodeling factors
     BAF complex
     PBAF complex
     CHRAC complex
     RSF complex
     WICH complex
     B-WICH complex
     NuRD complex
       K06067  HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
       K11642  CHD3, MI2A; chromodomain-helicase-DNA-binding protein 3 [EC:3.6.4.12]
       K11643  CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12]
       K10752  RBBP4, HAT2, CAF1, MIS16; histone-binding protein RBBP4
       K11659  RBBP7; histone-binding protein RBBP7
       K11660  MTA; metastasis-associated protein MTA
       K11591  MBD3; methyl-CpG-binding domain protein 3
     NuRF complex
     NuRF complex (fruit fly)
     SRCAP complex
     INO80 complex
     INO80 complex (yeast)
     RSC complex
     SWI/SNF complex
     SWR1 complex
     Other chromatin remodeling factors
 
 Prokaryotic Type

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Last updated: August 25, 2014