DNA Repair and Recombination Proteins

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 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
         K03648  UNG, UDG; uracil-DNA glycosylase [EC:3.2.2.27]
         K10861  UDG2, CCNO; uracil-DNA glycosylase 2 [EC:3.2.2.-]
         K20813  TDG; thymine-DNA glycosylase [EC:3.2.2.29]
         K03652  MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
         K10800  SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
         K03575  mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
         K10801  MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
         K03660  OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
         K10567  NEIL1; endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
         K10568  NEIL2; endonuclease VIII-like 2 [EC:3.2.2.- 4.2.99.18]
         K10569  NEIL3; endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18]
         K10773  NTHL1, nth; endonuclease III [EC:3.2.2.- 4.2.99.18]
       AP endonucleases
       Long Patch-BER factors
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
         K03648  UNG, UDG; uracil-DNA glycosylase [EC:3.2.2.27]
         K03649  mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
         K10800  SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
         K21929  udg; uracil-DNA glycosylase [EC:3.2.2.27]
         K01247  alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
         K13529  ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
         K03652  MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
         K03575  mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
         K01246  tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
         K10563  mutM, fpg; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
         K05522  nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
         K10773  NTHL1, nth; endonuclease III [EC:3.2.2.- 4.2.99.18]
       AP endonucleases
       RecJ
       DNA ligase
       DNA polymerase I
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024