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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:kpu03030]
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KP1_3487 holE; DNA polymerase III theta subunit
KP1_1074 dnaQ; DNA polymerase III subunit epsilon
KP1_1041 dnaE; DNA polymerase III subunit alpha
KP1_1328 dnaX; DNA polymerase III subunits gamma and tau
KP1_2088 holB; DNA polymerase III subunit delta
KP1_1627 holA; DNA polymerase III subunit delta
KP1_0786 holD; DNA polymerase III subunit psi
KP1_0545 holC; DNA polymerase III subunit chi
KP1_5482 dnaN; DNA polymerase III subunit beta
KP1_0294 dnaB; replicative DNA helicase
KP1_4765 dnaG; DNA primase
KP1_0302 ssb; single-strand DNA-binding protein
KP1_1073 rnhA; RNase HI
KP1_1040 rnhB; ribonuclease HII
KP1_0024 polA; DNA polymerase I
KP1_5350 yicF; DNA ligase
KP1_4005 ligA; DNA ligase
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K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:kpu03410]
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03420 Nucleotide excision repair [PATH:kpu03420]
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03430 Mismatch repair [PATH:kpu03430]
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KP1_4363 mutS; DNA mismatch repair protein
KP1_0438 mutL; DNA mismatch repair protein
KP1_4512 mutH; DNA mismatch repair protein
KP1_0172 uvrD; DNA-dependent ATPase I and helicase II
KP1_0577 putative helicase
KP1_3673 sbcB; exodeoxyribonuclease I
KP1_4088 xseA; exodeoxyribonuclease VII large subunit
KP1_1240 xseB; exodeoxyribonuclease VII small subunit
KP1_3488 exoX; exodeoxyribonuclease X
KP1_4608 recJ; single-stranded-DNA-specific exonuclease
KP1_0302 ssb; single-strand DNA-binding protein
KP1_1041 dnaE; DNA polymerase III subunit alpha
KP1_5482 dnaN; DNA polymerase III subunit beta
KP1_1328 dnaX; DNA polymerase III subunits gamma and tau
KP1_1627 holA; DNA polymerase III subunit delta
KP1_2088 holB; DNA polymerase III subunit delta
KP1_1074 dnaQ; DNA polymerase III subunit epsilon
KP1_3487 holE; DNA polymerase III theta subunit
KP1_0545 holC; DNA polymerase III subunit chi
KP1_0786 holD; DNA polymerase III subunit psi
KP1_5350 yicF; DNA ligase
KP1_4005 ligA; DNA ligase
KP1_5088 dam; DNA adenine methylase
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K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
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03440 Homologous recombination [PATH:kpu03440]
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KP1_4608 recJ; single-stranded-DNA-specific exonuclease
KP1_0302 ssb; single-strand DNA-binding protein
KP1_5481 recF; recombination protein F
KP1_4144 recO; DNA repair protein
KP1_1330 recR; recombination protein
KP1_4294 recA; recombinase A
KP1_0024 polA; DNA polymerase I
KP1_3506 ruvA; Holliday junction DNA helicase motor protein
KP1_3505 ruvB; Holliday junction DNA helicase
KP1_3507 ruvC; Holliday junction resolvase
KP1_5356 recG; ATP-dependent DNA helicase
KP1_4498 recB; exonuclease V beta subunit
KP1_4500 recC; exonuclease V gamma subunit
KP1_4497 recD; exonuclease V alpha subunit
KP1_1041 dnaE; DNA polymerase III subunit alpha
KP1_5482 dnaN; DNA polymerase III subunit beta
KP1_1328 dnaX; DNA polymerase III subunits gamma and tau
KP1_1627 holA; DNA polymerase III subunit delta
KP1_2088 holB; DNA polymerase III subunit delta
KP1_1074 dnaQ; DNA polymerase III subunit epsilon
KP1_3487 holE; DNA polymerase III theta subunit
KP1_0545 holC; DNA polymerase III subunit chi
KP1_0786 holD; DNA polymerase III subunit psi
KP1_0092 priA; primosome assembly protein
KP1_0469 priB; primosomal replication protein N
KP1_1325 priC; primosomal replication protein N''
KP1_0771 dnaT; primosomal protein I
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:kpu03000]
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03021 Transcription machinery [BR:kpu03021]
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03019 Messenger RNA biogenesis [BR:kpu03019]
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03041 Spliceosome
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03011 Ribosome [BR:kpu03011]
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03009 Ribosome biogenesis [BR:kpu03009]
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03016 Transfer RNA biogenesis [BR:kpu03016]
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03012 Translation factors [BR:kpu03012]
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03110 Chaperones and folding catalysts [BR:kpu03110]
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04131 Membrane trafficking [BR:kpu04131]
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04121 Ubiquitin system [BR:kpu04121]
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03051 Proteasome [BR:kpu03051]
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03032 DNA replication proteins [BR:kpu03032]
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KP1_1073 rnhA; RNase HI
KP1_3560 dcm; DNA cytosine methylase
KP1_0645 putative site-specific DNA methylase
KP1_2166 putative site-specific DNA methylase
KP1_0241 conserved hypothetical protein
KP1_1273 hupB; DNA-binding protein HU-beta
KP1_3278 himA; integration host factor alpha subunit
KP1_1912 himD; integration host factor beta subunit
KP1_5483 dnaA; chromosomal replication initiation protein
KP1_0294 dnaB; replicative DNA helicase
KP1_0770 dnaC; DNA replication protein
KP1_4765 dnaG; DNA primase
KP1_0302 ssb; single-strand DNA-binding protein
KP1_1041 dnaE; DNA polymerase III subunit alpha
KP1_5482 dnaN; DNA polymerase III subunit beta
KP1_0545 holC; DNA polymerase III subunit chi
KP1_1627 holA; DNA polymerase III subunit delta
KP1_2088 holB; DNA polymerase III subunit delta
KP1_1074 dnaQ; DNA polymerase III subunit epsilon
KP1_1328 dnaX; DNA polymerase III subunits gamma and tau
KP1_0786 holD; DNA polymerase III subunit psi
KP1_3487 holE; DNA polymerase III theta subunit
KP1_1040 rnhB; ribonuclease HII
KP1_0024 polA; DNA polymerase I
KP1_5350 yicF; DNA ligase
KP1_4005 ligA; DNA ligase
KP1_2527 tus; DNA replication terminus site-binding protein
KP1_p210 hypothetical protein
KP1_5088 dam; DNA adenine methylase
KP1_1663 SeqA family protein
KP1_4071 hda; DNA replication initiation factor
KP1_3874 gyrA; DNA gyrase subunit A
KP1_5480 gyrB; DNA gyrase subunit B
KP1_4717 parC; DNA topoisomerase IV subunit A
KP1_4725 parE; DNA topoisomerase IV subunit B
KP1_2311 topA; DNA topoisomerase I
KP1_2236 topB; DNA topoisomerase III
KP1_0634 putative DNA topoisomerase
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02315 dnaC; DNA replication protein DnaC
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10748 tus; DNA replication terminus site-binding protein
K10748 tus; DNA replication terminus site-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03645 seqA; negative modulator of initiation of replication
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:kpu03036]
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03400 DNA repair and recombination proteins [BR:kpu03400]
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KP1_2546 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase
KP1_1672 phrB; deoxyribodipyrimidine photolyase
KP1_4160 ung; uracil-DNA glycosylase
KP1_4673 mutY; adenine DNA glycosylase
KP1_3042 nth; endonuclease III
KP1_0923 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase
KP1_5332 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
KP1_5347 putative methylated-DNA-[protein]-cysteine S-methyltransferase
KP1_3867 ada; O6-methylguanine-DNA methyltransferase/DNA-binding transcriptional dual regulator
KP1_3866 alkB; oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions
KP1_4767 ygjF; G/U mismatch-specific DNA glycosylase
KP1_3731 alkA; 3-methyl-adenine DNA glycosylase II
KP1_5252 tag; 3-methyl-adenine DNA glycosylase I
KP1_5327 mutM; formamidopyrimidine-DNA glycosylase
KP1_1681 nei; endonuclease VIII
KP1_2250 xthA; exonuclease III
KP1_3825 nfo; endonuclease IV
KP1_0238 nfi; endonuclease V
KP1_4608 recJ; single-stranded-DNA-specific exonuclease
KP1_5350 yicF; DNA ligase
KP1_4005 ligA; DNA ligase
KP1_0024 polA; DNA polymerase I
KP1_0301 uvrA; excinuclease ABC subunit A
KP1_1756 uvrB; excinuclease ABC subunit B
KP1_3541 uvrC; excinuclease ABC subunit C
KP1_2259 ydjQ; endonuclease in nucleotide excision repair
KP1_0172 uvrD; DNA-dependent ATPase I and helicase II
KP1_0577 putative helicase
KP1_0222 rpoB; DNA-directed RNA polymerase beta subunit
KP1_0223 rpoC; DNA-directed RNA polymerase beta' subunit
KP1_5015 DNA-directed RNA polymerase alpha subunit
KP1_5352 rpoZ; DNA-directed RNA polymerase omega subunit
KP1_2106 mfd; transcription-repair ATP-dependent coupling factor
KP1_4363 mutS; DNA mismatch repair protein
KP1_0438 mutL; DNA mismatch repair protein
KP1_4512 mutH; DNA mismatch repair protein
KP1_3673 sbcB; exodeoxyribonuclease I
KP1_4088 xseA; exodeoxyribonuclease VII large subunit
KP1_1240 xseB; exodeoxyribonuclease VII small subunit
KP1_3488 exoX; exodeoxyribonuclease X
KP1_1041 dnaE; DNA polymerase III subunit alpha
KP1_5482 dnaN; DNA polymerase III subunit beta
KP1_0545 holC; DNA polymerase III subunit chi
KP1_1627 holA; DNA polymerase III subunit delta
KP1_2088 holB; DNA polymerase III subunit delta
KP1_1074 dnaQ; DNA polymerase III subunit epsilon
KP1_1328 dnaX; DNA polymerase III subunits gamma and tau
KP1_0786 holD; DNA polymerase III subunit psi
KP1_3487 holE; DNA polymerase III theta subunit
KP1_0302 ssb; single-strand DNA-binding protein
KP1_5088 dam; DNA adenine methylase
KP1_3559 vsr; DNA mismatch endonuclease
KP1_4498 recB; exonuclease V beta subunit
KP1_4500 recC; exonuclease V gamma subunit
KP1_4497 recD; exonuclease V alpha subunit
KP1_4294 recA; recombinase A
KP1_3506 ruvA; Holliday junction DNA helicase motor protein
KP1_3505 ruvB; Holliday junction DNA helicase
KP1_3507 ruvC; Holliday junction resolvase
KP1_2168 bacteriophage V crossover junction endodeoxyribonuclease
KP1_0092 priA; primosome assembly protein
KP1_0469 priB; primosomal replication protein N
KP1_1325 priC; primosomal replication protein N''
KP1_0771 dnaT; primosomal protein I
KP1_1198 sbcC; ATP-dependent dsDNA exonuclease
KP1_1199 sbcD; ATP-dependent dsDNA exonuclease
KP1_0805 sms; probable ATP-dependent protease
KP1_5481 recF; recombination protein F
KP1_5356 recG; ATP-dependent DNA helicase
KP1_4144 recO; DNA repair protein
KP1_1330 recR; recombination protein
KP1_4194 recN; DNA repair protein
KP1_1196 rdgC; recombination associated protein
KP1_3165 cas1; CRISPR-associated Cas1 family protein
KP1_3848 yejH; putative ATP-dependent helicase
KP1_0550 yjgR; putative transport system ATP-binding component
KP1_3874 gyrA; DNA gyrase subunit A
KP1_5480 gyrB; DNA gyrase subunit B
KP1_2311 topA; DNA topoisomerase I
KP1_0241 conserved hypothetical protein
KP1_1273 hupB; DNA-binding protein HU-beta
KP1_4989 fis; DNA-binding protein
KP1_3278 himA; integration host factor alpha subunit
KP1_1912 himD; integration host factor beta subunit
KP1_0178 recQ; ATP-dependent DNA helicase
KP1_3314 hns; DNA-binding protein HLP-II/pleiotropic regulator
KP1_p056 hns; DNA-binding protein HLP-II
KP1_1093 dinB; DNA polymerase IV
KP1_2206 umuC; DNA polymerase V subunit C
KP1_2205 umuD; DNA polymerase V subunit D
KP1_0283 lexA; LexA repressor
KP1_2167 conserved hypothetical protein
KP1_0872 polB; DNA polymerase II
KP1_5466 putative DNA-damage-inducible protein
KP1_2061 dinI; DNA-damage-inducible protein I
KP1_4292 recX; RecA regulator
KP1_p167 putative cytoplasmic protein
KP1_0723 putative transposase
KP1_0138 rep; ATP-dependent DNA helicase
KP1_1964 helD; DNA helicase IV
KP1_1786 dinG; LexA-regulated (SOS) repair enzyme
KP1_3450 yoaA; putative ATP-dependent helicase
KP1_p012 hypothetical protein
KP1_4269 nrdE; ribonucleotide-diphosphate reductase alpha subunit
KP1_3876 nrdA; ribonucleotide-diphosphate reductase alpha subunit
KP1_4270 nrdF; ribonucleotide-diphosphate reductase beta subunit
KP1_3878 nrdB; ribonucleotide-diphosphate reductase beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K14623 dinD; DNA-damage-inducible protein D
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:kpu03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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