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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ksk03030]
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03410 Base excision repair [PATH:ksk03410]
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 KSE_36070 nth; putative DNA glycosylase/AP lyase
KSE_56090 ung1; putative uracil-DNA glycosylase
KSE_27900 ung2; putative uracil-DNA glycosylase
KSE_34190 putative adenine glycosylase
KSE_51660 mutM; putative formamidopyrimidine-DNA glycosylase/AP lyase
KSE_04300 nei1; putative DNA glycosylase/AP lyase Nei
KSE_14070 nei2; putative DNA glycosylase/AP lyase Nei
KSE_19940 putative DNA glycosylase
KSE_48500 tag; putative DNA-3-methyladenine glycosylase I
KSE_32500 mug; putative G/U mismatch-specific DNA glycosylase
KSE_03560 putative uracil-DNA glycosylase
KSE_70720 exoA; putative exodeoxyribonuclease
KSE_63990 xthA; putative exodeoxyribonuclease III
KSE_72630 nfo; putative endonuclease 4
KSE_51090 ligA1; putative DNA ligase
KSE_71080 ligA2; putative DNA ligase
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:ksk03420]
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03430 Mismatch repair [PATH:ksk03430]
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03440 Homologous recombination [PATH:ksk03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ksk03000]
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03021 Transcription machinery [BR:ksk03021]
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03019 Messenger RNA biogenesis [BR:ksk03019]
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03041 Spliceosome
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03011 Ribosome [BR:ksk03011]
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03009 Ribosome biogenesis [BR:ksk03009]
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03016 Transfer RNA biogenesis [BR:ksk03016]
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03012 Translation factors [BR:ksk03012]
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03110 Chaperones and folding catalysts [BR:ksk03110]
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04131 Membrane trafficking [BR:ksk04131]
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04121 Ubiquitin system [BR:ksk04121]
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03051 Proteasome [BR:ksk03051]
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03032 DNA replication proteins [BR:ksk03032]
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03036 Chromosome and associated proteins [BR:ksk03036]
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03400 DNA repair and recombination proteins [BR:ksk03400]
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KSE_34350 ogt4; putative methylated-DNA--protein-cysteine methyltransferase
KSE_19950 ogt1; putative methylated-DNA--protein-cysteine methyltransferase
KSE_58530 ogt3; putative methylated-DNA--protein-cysteine methyltransferase
KSE_58550 ogt2; putative methylated-DNA--protein-cysteine methyltransferase
KSE_09800 phr; putative deoxyribodipyrimidine photo-lyase
KSE_56090 ung1; putative uracil-DNA glycosylase
KSE_27900 ung2; putative uracil-DNA glycosylase
KSE_34190 putative adenine glycosylase
KSE_36070 nth; putative DNA glycosylase/AP lyase
KSE_44230 putative ATP-dependent DNA helicase
KSE_01470 putative hydrolase
KSE_04500 hypothetical protein
KSE_42010 putative hydrolase
KSE_52200 hypothetical protein
KSE_19120 hypothetical protein
KSE_54020 putative hydrolase
KSE_43390 putative hydrolase
KSE_48110 hypothetical protein
KSE_54390 dut; putative deoxyuridine 5'-triphosphate nucleotidohydrolase
KSE_74370 hypothetical protein
KSE_58580 alkB; putative alpha-ketoglutarate-dependent dioxygenase AlkB
KSE_32500 mug; putative G/U mismatch-specific DNA glycosylase
KSE_03560 putative uracil-DNA glycosylase
KSE_19940 putative DNA glycosylase
KSE_48500 tag; putative DNA-3-methyladenine glycosylase I
KSE_51660 mutM; putative formamidopyrimidine-DNA glycosylase/AP lyase
KSE_04300 nei1; putative DNA glycosylase/AP lyase Nei
KSE_14070 nei2; putative DNA glycosylase/AP lyase Nei
KSE_70720 exoA; putative exodeoxyribonuclease
KSE_63990 xthA; putative exodeoxyribonuclease III
KSE_72630 nfo; putative endonuclease 4
KSE_28450 nfi; putative endonuclease V
KSE_51090 ligA1; putative DNA ligase
KSE_71080 ligA2; putative DNA ligase
KSE_55320 uvrA; putative UvrABC system protein A
KSE_69230 putative UvrABC system protein A
KSE_55270 uvrB; putative UvrABC system protein B
KSE_55360 uvrC; putative UvrABC system protein C
KSE_48860 putative ATP-dependent DNA helicase
KSE_48960 putative ATP-dependent DNA helicase
KSE_30850 pcrA; putative ATP-dependent DNA helicase PcrA
KSE_32000 rpoB; putative DNA-directed RNA polymerase subunit beta
KSE_31990 rpoC; putative DNA-directed RNA polymerase subunit beta'
KSE_31340 rpoA; putative DNA-directed RNA polymerase subunit alpha
KSE_13850 rpoZ; putative DNA-directed RNA polymerase subunit omega
KSE_46630 mfd; putative transcription-repair-coupling factor
KSE_47890 xseA; putative exodeoxyribonuclease 7 large subunit
KSE_47860 xseB; putative exodeoxyribonuclease 7 small subunit
KSE_20850 dnaE1; putative DNA polymerase III subunit alpha
KSE_59330 dnaE2; putative DNA polymerase III subunit alpha
KSE_39200 dnaN; putative DNA polymerase III subunit beta
KSE_25840 holA; putative DNA polymerase III subunit delta
KSE_35770 holB; putative DNA polymerase III subunit delta'
KSE_56970 dnaQ; putative DNA polymerase III subunit epsilon
KSE_20040 putative exonuclease
KSE_33650 putative exonuclease
KSE_26580 putative exonuclease
KSE_14590 putative exonuclease
KSE_36680 dnaX; putative DNA polymerase III subunit gamma/tau
KSE_54570 ssb2; putative single-stranded DNA-binding protein
KSE_38900 ssb1; putative single-stranded DNA-binding protein
KSE_37950 vsr2; putative very short patch repair endonuclease
KSE_35650 vsr3; putative very short patch repair endonuclease
KSE_57880 vsr1; putative very short patch repair endonuclease
KSE_54430 putative helicase RecD/TraA family protein
KSE_53590 recA; putative protein RecA
KSE_14440 ruvA; putative Holliday junction ATP-dependent DNA helicase RuvA
KSE_14430 ruvB; putative Holliday junction ATP-dependent DNA helicase RuvB
KSE_14450 ruvC; putative crossover junction endodeoxyribonuclease RuvC
KSE_13820 priA; putative primosomal protein N'
KSE_62740 hypothetical protein
KSE_62750 putative exonuclease
KSE_34250 radA; putative DNA repair protein RadA
KSE_39220 recF; putative DNA replication and repair protein RecF
KSE_51580 recG; putative ATP-dependent DNA helicase RecG
KSE_25450 recO; putative DNA repair protein RecO
KSE_36660 recR; putative recombination protein RecR
KSE_57400 recN; putative DNA repair protein RecN
KSE_05440 putative CRISPR-associated protein
KSE_64750 putative CRISPR-associated protein
KSE_05320 hypothetical protein
KSE_39250 gyrA; putative DNA gyrase subunit A
KSE_54160 putative type II topoisomerase
KSE_39240 gyrB; putative DNA gyrase subunit B
KSE_54090 putative type II topoisomerase
KSE_35790 topA; putative DNA topoisomerase I
KSE_51430 hup2; putative DNA-binding protein Hu
KSE_28800 hup1; putative DNA-binding protein Hu
KSE_53980 putative ATP-dependent DNA helicase
KSE_15290 dinB; putative DNA polymerase IV
KSE_53850 lexA; putative LexA repressor
KSE_53600 recX; putative regulatory protein RecX
KSE_53840 putative ATP-dependent helicase
KSE_53520 putative ATP-dependent helicase
KSE_57440 nudF1; putative ADP-ribose pyrophosphatase
KSE_04980 putative hydrolase
KSE_53870 nrdJ; putative vitamin B12-dependent ribonucleotide reductase
KSE_49280 nrdA; putative ribonucleoside-diphosphate reductase subunit alpha
KSE_49270 nrdB; putative ribonucleoside-diphosphate reductase subunit beta
KSE_53100 hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:ksk03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Kitasatospora setae