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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:lce03030]
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03410 Base excision repair [PATH:lce03410]
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03420 Nucleotide excision repair [PATH:lce03420]
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03430 Mismatch repair [PATH:lce03430]
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03440 Homologous recombination [PATH:lce03440]
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 LC2W_1724 recJ; Single-stranded DNA-specific exonuclease
LC2W_0010 Single-stranded DNA-binding protein
LC2W_0012 hypothetical protein
LC2W_0005 recF; DNA replication and repair protein recF
LC2W_1681 DNA repair protein recO
LC2W_2424 recR; Recombination protein recR
LC2W_1022 recA; Protein recA
LC2W_2812 recA; RecA protein
LC2W_1884 DNA polymerase I
LC2W_0845 ruvA; Holliday junction DNA helicase RuvA
LC2W_0846 ruvA; Holliday junction DNA helicase RuvA
LC2W_1787 DNA helicase RecG
LC2W_1469 Exodeoxyribonuclease V alpha chain
LC2W_2221 AAA ATPase
LC2W_1527 dnaE; DNA polymerase III
LC2W_1745 polC; DNA polymerase III, alpha subunit, Gram-positive type
LC2W_0002 dnaN; DNA-directed DNA polymerase
LC2W_2426 DNA polymerase III subunit gamma/tau
LC2W_1494 DNA polymerase III subunit delta
LC2W_2418 DNA polymerase III gamma subunit
LC2W_1155 hypothetical protein
LC2W_1799 priA; DNA replication factor Y
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:lce03000]
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03021 Transcription machinery [BR:lce03021]
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03019 Messenger RNA biogenesis [BR:lce03019]
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03041 Spliceosome
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03011 Ribosome [BR:lce03011]
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03009 Ribosome biogenesis [BR:lce03009]
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03016 Transfer RNA biogenesis [BR:lce03016]
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03012 Translation factors [BR:lce03012]
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03110 Chaperones and folding catalysts [BR:lce03110]
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04131 Membrane trafficking [BR:lce04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:lce03032]
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03036 Chromosome and associated proteins [BR:lce03036]
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03400 DNA repair and recombination proteins [BR:lce03400]
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LC2W_1149 uracil-DNA glycosylase
LC2W_1711 N-methylpurine-DNA glycosylase-like protein isoform b
LC2W_0760 hypothetical protein
LC2W_1655 nth; Putative endonuclease III
LC2W_0272 DEAD_2 domain protein
LC2W_2760 Phosphohydrolase (MutT/nudix family protein)
LC2W_2730 Putative hydrolase
LC2W_2974 NUDIX hydrolase
LC2W_0095 ytkD; Xanthosine triphosphate pyrophosphatase
LC2W_2494 coaBC; Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenat metabolism flavoprotein)
LC2W_0128 Transcriptional regulator, AraC family
LC2W_0500 tag; DNA-3-methyladenine glycosylase I
LC2W_2368 guaA; Probable GMP synthase
LC2W_1883 Formamidopyrimidine-DNA glycosylase
LC2W_1156 Exodeoxyribonuclease III
LC2W_1691 Probable endonuclease 4
LC2W_1724 recJ; Single-stranded DNA-specific exonuclease
LC2W_1215 lig; DNA ligase
LC2W_1884 DNA polymerase I
LC2W_1059 uvrA; Excision endonuclease subunit UvrA
LC2W_2797 Excision endonuclease subunit UvrA
LC2W_1057 Excinuclease ABC subunit B
LC2W_1510 uvrC; UvrABC system protein C
LC2W_1214 ATP-dependent DNA helicase PcrA
LC2W_2674 DNA-directed RNA polymerase subunit beta
LC2W_2673 rpoC; DNA-directed RNA polymerase, beta' subunit
LC2W_2637 rpoA; DNA-directed RNA polymerase, alpha subunit
LC2W_2726 DNA-directed RNA polymerase delta subunit
LC2W_1801 DNA-directed RNA polymerase subunit omega
LC2W_2696 mfd; Transcription-repair coupling factor
LC2W_2392 mutS; DNA mismatch repair protein mutS
LC2W_0867 mutSB; DNA mismatch repair protein, MutSB
LC2W_2391 DNA mismatch repair protein HexB
LC2W_1812 xseA; Exodeoxyribonuclease 7 large subunit
LC2W_1811 xseB; Exodeoxyribonuclease 7 small subunit
LC2W_1527 dnaE; DNA polymerase III
LC2W_1745 polC; DNA polymerase III, alpha subunit, Gram-positive type
LC2W_0002 dnaN; DNA-directed DNA polymerase
LC2W_1494 DNA polymerase III subunit delta
LC2W_2418 DNA polymerase III gamma subunit
LC2W_1155 hypothetical protein
LC2W_2426 DNA polymerase III subunit gamma/tau
LC2W_0010 Single-stranded DNA-binding protein
LC2W_0012 hypothetical protein
LC2W_1469 Exodeoxyribonuclease V alpha chain
LC2W_2221 AAA ATPase
LC2W_1022 recA; Protein recA
LC2W_2812 recA; RecA protein
LC2W_0845 ruvA; Holliday junction DNA helicase RuvA
LC2W_0846 ruvA; Holliday junction DNA helicase RuvA
LC2W_1799 priA; DNA replication factor Y
LC2W_0754 SMC domain protein
LC2W_0753 Exonuclease SbcD
LC2W_2493 DNA repair protein RadA
LC2W_0005 recF; DNA replication and repair protein recF
LC2W_1787 DNA helicase RecG
LC2W_1681 DNA repair protein recO
LC2W_2424 recR; Recombination protein recR
LC2W_1807 recN; DNA repair protein recN
LC2W_1652 recU; Recombination protein RecU
LC2W_1662 ATP-dependent nuclease subunit A
LC2W_1663 Putative ATP-dependent nuclease subunit B
LC2W_2351 CRISPR-associated protein Cas1
LC2W_1409 hypothetical protein
LC2W_0008 DNA gyrase, A subunit
LC2W_0007 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B
LC2W_1569 DNA topoisomerase TopA
LC2W_1545 hupA; DNA-binding protein HU-beta-like protein
LC2W_0955 recT; Phage recombinase
LC2W_1540 ATP-dependent DNA helicase RecQ
LC2W_1243 ATP-dependent DNA helicase RecQ
LC2W_0854 dinB; DNA polymerase IV
LC2W_1209 Possible DNA-directed DNA polymerase
LC2W_p34 ImpB/MucB/SamB family protein
LC2W_0803 LexA repressor
LC2W_1946 Exopolyphosphatase
LC2W_1661 ATP-dependent helicase
LC2W_1640 Ribonucleotide-diphosphate reductase subunit alpha
LC2W_1641 nrdF; hypothetical protein
LC2W_0856 Phosphoesterase, DHH
LC2W_2985 DHH subfamily 1 protein
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K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:lce03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Lacticaseibacillus paracasei LC2W