KEGG Orthology (KO) - Leptospira interrogans serovar Lai IPAV

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:lie03030]
     03410 Base excision repair [PATH:lie03410]
     03420 Nucleotide excision repair [PATH:lie03420]
     03430 Mismatch repair [PATH:lie03430]
     03440 Homologous recombination [PATH:lie03440]
       LIF_A2438 recJ; single-stranded DNA exonuclease
       LIF_A2932 ssb; single-stranded DNA-binding protein
       LIF_A1357 ssb; single-stranded DNA-binding protein
       LIF_A0003 recF; recombination protein RecF
       LIF_A1366 recombinational DNA repair protein
       LIF_A3462 recR; recombinational DNA repair protein
       LIF_A1776 recA; recombinase A
       LIF_A2914 polA; DNA polymerase I
       LIF_A2360 ruvA; holliday junction DNA helicase RuvA
       LIF_A0663 ruvB; holliday junction DNA helicase B
       LIF_A0587 ruvC; putative holliday junction endodeoxyribonuclease protein
       LIF_A3151 recG; ATP-dependent DNA helicase RecG
       LIF_A0785 exodeoxyribonuclease V beta chain
       LIF_A0784 exodeoxyribonuclease v gamma chain
       LIF_A0786 exodeoxyribonuclease v alpha chain
       LIF_A0221 dnaE; DNA polymerase III alpha subunit
       LIF_A0002 dnaN; DNA polymerase III beta subunit
       LIF_A3460 dnaX; DNA polymerase III gamma subunit
       LIF_A3482 DNA polymerase III gamma and tau subunits
       LIF_A0014 DNA-directed DNA polymerase delta subunit
       LIF_A1960 priA; primosomal protein N
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:lie03000]
     03021 Transcription machinery [BR:lie03021]
     03019 Messenger RNA biogenesis [BR:lie03019]
     03041 Spliceosome [BR:lie03041]
     03011 Ribosome [BR:lie03011]
     03009 Ribosome biogenesis [BR:lie03009]
     03016 Transfer RNA biogenesis [BR:lie03016]
     03012 Translation factors [BR:lie03012]
     03110 Chaperones and folding catalysts [BR:lie03110]
     04131 Membrane trafficking [BR:lie04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:lie03051]
     03032 DNA replication proteins [BR:lie03032]
     03036 Chromosome and associated proteins [BR:lie03036]
     03400 DNA repair and recombination proteins [BR:lie03400]
       LIF_A2168 deoxyribodipyrimidine photolyase
       LIF_A3105 uracil-DNA glycosylase
       LIF_A1902 mutY; A/G specific adenine glycosylase
       LIF_A1760 nth; endonuclease III
       LIF_A1729 ssl2; DNA or RNA helicase
       LIF_A1832 endonuclease
       LIF_A1276 NUDIX hydrolase
       LIF_A0107 putative nudix hydrolase
       LIF_B068 ADP-ribose pyrophosphatase
       LIF_A0906 dut; dUTP diphosphatase
       LIF_A3392 ada; methylated-DNA--protein-cysteine S-methyltransferase
       LIF_A2947 uracil-DNA glycosylase
       LIF_A0238 alkA; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
       LIF_A1102 alkA; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
       LIF_A3068 tag; 3-methyl-adenine DNA glycosylase I
       LIF_A2061 xthA; exodeoxyribonuclease
       LIF_A2438 recJ; single-stranded DNA exonuclease
       LIF_A3281 lig; NAD dependent DNA ligase
       LIF_A2914 polA; DNA polymerase I
       LIF_A1804 uvrA; excinuclease ABC subunit A
       LIF_A0530 uvrB; excinuclease ABC subunit B
       LIF_A1763 uvrC; excinuclease ABC subunit C
       LIF_A1789 uvrD; DNA helicase UvrD
       LIF_A1891 uvrD; DNA helicase UvrD
       LIF_A0410 uvrD; DNA helicase UvrD
       LIF_A0877 uvrD; DNA helicase UvrD
       LIF_A2740 rpoB; DNA-directed RNA polymerase subunit beta
       LIF_A2739 rpoC; DNA-directed RNA polymerase subunit beta'
       LIF_A0628 rpoA; RNA polymerase alpha subunit
       LIF_A2058 mfd; transcription-repair coupling factor
       LIF_A1745 mutS; DNA mismatch repair protein mutS
       LIF_A0951 mutL; DNA mismatch repair protein mutL
       LIF_A1925 xseA; exodeoxyribonuclease VII large subunit
       LIF_A1926 xseB; exodeoxyribonuclease VII small subunit
       LIF_A0221 dnaE; DNA polymerase III alpha subunit
       LIF_A0002 dnaN; DNA polymerase III beta subunit
       LIF_A0014 DNA-directed DNA polymerase delta subunit
       LIF_A3460 dnaX; DNA polymerase III gamma subunit
       LIF_A3482 DNA polymerase III gamma and tau subunits
       LIF_A2932 ssb; single-stranded DNA-binding protein
       LIF_A1357 ssb; single-stranded DNA-binding protein
       LIF_A0785 exodeoxyribonuclease V beta chain
       LIF_A0784 exodeoxyribonuclease v gamma chain
       LIF_A0786 exodeoxyribonuclease v alpha chain
       LIF_A1776 recA; recombinase A
       LIF_A2360 ruvA; holliday junction DNA helicase RuvA
       LIF_A0663 ruvB; holliday junction DNA helicase B
       LIF_A0587 ruvC; putative holliday junction endodeoxyribonuclease protein
       LIF_A1960 priA; primosomal protein N
       LIF_A2369 DNA repair protein RadA
       LIF_A0003 recF; recombination protein RecF
       LIF_A3151 recG; ATP-dependent DNA helicase RecG
       LIF_A1366 recombinational DNA repair protein
       LIF_A3462 recR; recombinational DNA repair protein
       LIF_A1895 recN; DNA repair protein RecN
       LIF_A2559 conserved hypothetical protein
       LIF_A0555 CRISPR-associated protein Cas1
       LIF_A0796 cdc9; ATP-dependent DNA ligase
       LIF_A0006 gyrA; DNA gyrase subunit A
       LIF_A3343 gyrA; DNA gyrase subunit A
       LIF_A0005 gyrB; DNA gyrase subunit B
       LIF_A3344 DNA gyrase subunit B
       LIF_A1392 topA; DNA topoisomerase
       LIF_A0510 recQ; ATP-dependent DNA helicase RecQ
       LIF_A0783 recQ; ATP-dependent DNA helicase RecQ
       LIF_A0420 dinP; DNA polymerase IV
       LIF_A1158 lexA; transcriptional repressor LexA
       LIF_A1508 dinG; ATP-dependent helicase
       LIF_A1928 nrdA; ribonucleotide reductase subunit alpha
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:lie03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: March 26, 2024