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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:lla03030]
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03410 Base excision repair [PATH:lla03410]
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03420 Nucleotide excision repair [PATH:lla03420]
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03430 Mismatch repair [PATH:lla03430]
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03440 Homologous recombination [PATH:lla03440]
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 L0259 recJ; single-stranded DNA specific exonuclease
L0302 ssbB; single-strand binding protein
L0299 ssbA; single-strand binding protein
L0300 pi212; prophage pi2 protein 12, single strand binding protein
L0301 pi348; prophage pi3 protein 48, single strand binding helix destabilising protein
L0261 recF; RecF protein
L1006 yafD; hypothetical protein
L0265 recM; RecM protein
L0260 recA; RecA protein
L0270 polA; DNA polymerase I
L0266 ruvA; DNA helicase RuvA
L0267 ruvB; DNA helicase RuvB
L0262 recG; ATP-dependent DNA helicase RecG
L180415 recD; exodeoxyribonuclease V alpha chain
L0307 dnaE; DNA polymerase III, alpha chain 2
L0278 polC; DNA polymerase III, alpha chain
L0275 dnaN; DNA polymerase III, beta chain
L0279 dnaH; DNA polymerase III, subunits beta and tau
L102491 yraC; hypothetical protein
L0280 holB; DNA polymerase III, delta subunit
L9094 dnaQ; DNA polymerase III, epsilon chain
L0292 priA; primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:lla03000]
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03021 Transcription machinery [BR:lla03021]
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03019 Messenger RNA biogenesis [BR:lla03019]
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03041 Spliceosome
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03011 Ribosome [BR:lla03011]
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03009 Ribosome biogenesis [BR:lla03009]
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03016 Transfer RNA biogenesis [BR:lla03016]
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03012 Translation factors [BR:lla03012]
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03110 Chaperones and folding catalysts [BR:lla03110]
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04131 Membrane trafficking [BR:lla04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:lla03032]
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03036 Chromosome and associated proteins [BR:lla03036]
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03400 DNA repair and recombination proteins [BR:lla03400]
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L118481 ogt; 6-O-methylguanine-DNA methyltransferase
L32653 ung; uracil-DNA glycosilase
L0296 mutY; A/G-specific adenine glycosylase
L0253 nth; endonuclease III
L0288 mutX; mutator protein MutT
L99869 yxbC; hypothetical protein
L181168 dut; deoxyuridine 5'-triphosphate nucleotidhydrolase
L42912 pi335; prophage pi3 protein 35, deoxyuridine 5'-triphosphate nucleotidohydrolase
L48154 pi221; prophage pi2 protein 21, deoxyuridine 5'-triphosphate nucleotidohydrolase
L58858 pi120; prophage pi1 protein 16, deoxyuridine 5'-triphosphate nucleotidohydrolase
L0149 adaA; methylphosphotriester-DNA alkyltransferase
L0289 tag; DNA-3-methyladenine glycosidase I
L0271 mutM; formamidopyrimidine-DNA glycosylase
L198056 exoA; exodeoxyribonuclease A
L0259 recJ; single-stranded DNA specific exonuclease
L0304 ligA; DNA ligase
L0270 polA; DNA polymerase I
L0256 uvrA; excinuclease ABC subunit A
L0257 uvrB; excinuclease ABC subunit B
L0258 uvrC; excinuclease ABC subunit C
L0287 pcrA; ATP-dependent helicase PcrA
L0137 rpoB; DNA-directed RNA polymerase beta chain
L0138 rpoC; DNA-directed RNA polymerase beta' chain
L0136 rpoA; DNA-directed RNA polymerase alpha chain
L0141 rpoE; DNA-directed RNA polymerase delta chain
L149295 ytgE; unknown protein
L0263 mfd; transcription-repair coupling factor
L0277 hexA; mismatch repair protein MutS
L0293 mutS; DNA mismatch repair protein MutS
L0276 hexB; DNA mismatch repair protein MutL
L0254 xseA; exonuclease VII large subunit
L0255 xseB; exonuclease VII small subunit
L0307 dnaE; DNA polymerase III, alpha chain 2
L0278 polC; DNA polymerase III, alpha chain
L0275 dnaN; DNA polymerase III, beta chain
L102491 yraC; hypothetical protein
L0280 holB; DNA polymerase III, delta subunit
L9094 dnaQ; DNA polymerase III, epsilon chain
L0279 dnaH; DNA polymerase III, subunits beta and tau
L0302 ssbB; single-strand binding protein
L0299 ssbA; single-strand binding protein
L0300 pi212; prophage pi2 protein 12, single strand binding protein
L0301 pi348; prophage pi3 protein 48, single strand binding helix destabilising protein
L180415 recD; exodeoxyribonuclease V alpha chain
L0260 recA; RecA protein
L0266 ruvA; DNA helicase RuvA
L0267 ruvB; DNA helicase RuvB
L0292 priA; primosomal protein N'
L152588 sbcC; ATP-dependent dsDNA exonuclease
L0327 sbcD; exonuclease SbcD
L0303 radA; DNA repair protein RadA
L0261 recF; RecF protein
L0262 recG; ATP-dependent DNA helicase RecG
L1006 yafD; hypothetical protein
L0265 recM; RecM protein
L0264 recN; DNA repair protein RecN
L131245 yfdA; hypothetical protein
L0251 rexA; subunit A of ATP-dependent exonuclease
L0252 rexB; subunit B of ATP-dependent exonuclease
L0282 gyrA; DNA gyrase subunit A
L0283 gyrB; DNA gyrase subunit B
L0298 topA; DNA topoisomerase I
L102317 hslA; HU like DNA-binding protein
L102634 hslB; HU-like DNA-binding protein
L53019 pi111; prophage pi1 protein 11, recombinase
L0268 recQ; ATP-dependent DNA helicase RecQ
L0305 dinP; DNA-damage-inducible protein P
L180104 umuC; SOS responce UmuC protein
L43222 ywgA; hypothetical protein
L0284 dinG; ATP-dependent helicase DinG
L0294 nrdE; ribonucleoside-diphosphate reductase alpha chain
L0295 nrdF; ribonucleoside-diphosphate reductase beta chain
L141547 yheB; conserved hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:lla03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Lactococcus lactis subsp. lactis Il1403