| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:lme03030]
|
03410 Base excision repair [PATH:lme03410]
|
 LEUM_1467 Uracil-DNA glycosylase
LEUM_1861 A/G-specific DNA-adenine glycosylase
LEUM_0527 DNA-(apurinic or apyrimidinic site) lyase
LEUM_0241 DNA-3-methyladenine glycosylase I
LEUM_1528 Exonuclease III
LEUM_0713 DNA polymerase I
LEUM_1474 exonuclease RecJ
LEUM_0568 NAD-dependent DNA ligase
|
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
03420 Nucleotide excision repair [PATH:lme03420]
|
03430 Mismatch repair [PATH:lme03430]
|
03440 Homologous recombination [PATH:lme03440]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:lme03000]
|
03021 Transcription machinery [BR:lme03021]
|
03019 Messenger RNA biogenesis [BR:lme03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:lme03011]
|
03009 Ribosome biogenesis [BR:lme03009]
|
03016 Transfer RNA biogenesis [BR:lme03016]
|
03012 Translation factors [BR:lme03012]
|
03110 Chaperones and folding catalysts [BR:lme03110]
|
04131 Membrane trafficking [BR:lme04131]
|
04121 Ubiquitin system
|
03051 Proteasome
|
03032 DNA replication proteins [BR:lme03032]
|
03036 Chromosome and associated proteins [BR:lme03036]
|
03400 DNA repair and recombination proteins [BR:lme03400]
|
LEUM_1480 Methylated DNA-protein cysteine methyltransferase
LEUM_0810 deoxyribodipyrimidine photo-lyase type I
LEUM_1467 Uracil-DNA glycosylase
LEUM_1861 A/G-specific DNA-adenine glycosylase
LEUM_0381 ADP-ribose pyrophosphatase
LEUM_0910 ADP-ribose pyrophosphatase
LEUM_0156 deoxyuridine 5'-triphosphate nucleotidohydrolase
LEUM_0241 DNA-3-methyladenine glycosylase I
LEUM_0527 DNA-(apurinic or apyrimidinic site) lyase
LEUM_1528 Exonuclease III
LEUM_1474 exonuclease RecJ
LEUM_0568 NAD-dependent DNA ligase
LEUM_0713 DNA polymerase I
LEUM_0393 Excinuclease ABC subunit A
LEUM_0392 Excinuclease ABC subunit B
LEUM_0520 Excinuclease ABC subunit C
LEUM_0566 ATP-dependent DNA helicase PcrA
LEUM_1882 Superfamily I DNA and RNA helicase
LEUM_1825 DNA-directed RNA polymerase subunit beta
LEUM_1824 DNA-directed RNA polymerase subunit beta'
LEUM_0221 DNA-directed RNA polymerase subunit alpha
LEUM_0513 DNA-directed RNA polymerase, delta subunit
LEUM_1712 DNA-directed RNA polymerase subunit omega
LEUM_0399 transcription-repair coupling factor
LEUM_1576 DNA mismatch repair protein MutS
LEUM_1717 MutS family ATPase
LEUM_1575 DNA mismatch repair protein MutL
LEUM_1604 Exodeoxyribonuclease VII large subunit
LEUM_1603 Exodeoxyribonuclease VII small subunit
LEUM_0774 DNA polymerase III catalytic subunit, DnaE type
LEUM_0689 DNA polymerase III catalytic subunit, PolC type
LEUM_0002 DNA polymerase III, beta subunit
LEUM_1587 DNA polymerase III, delta subunit
LEUM_0281 DNA polymerase III, delta prime subunit
LEUM_1529 DNA polymerase III, epsilon subunit related 3'-5' exonuclease
LEUM_0276 DNA polymerase III, gamma/tau subunit
LEUM_1056 Single-stranded DNA-binding protein
LEUM_1969 single-strand binding protein
LEUM_1264 Single-stranded DNA-binding protein
LEUM_0696 ATP-dependent DNA helicase, RecD/TraA family
LEUM_0584 RecA protein
LEUM_0616 Holliday junction DNA helicase subunit RuvA
LEUM_0612 Holliday junction DNA helicase subunit RuvB
LEUM_1515 replication restart DNA helicase PriA
LEUM_0157 Predicted ATP-dependent serine protease
LEUM_0004 DNA replication and repair protein RecF
LEUM_0536 ATP-dependent DNA helicase RecG
LEUM_0781 DNA replication and repair protein RecO
LEUM_0277 DNA replication and repair protein RecR
LEUM_1599 DNA replication and repair protein RecN
LEUM_0650 Penicillin-binding protein-related factor A, putative recombinase
LEUM_1481 DNA helicase/exodeoxyribonuclease V, subunit A
LEUM_1482 ATP-dependent nuclease, subunit B
LEUM_0006 DNA gyrase subunit A
LEUM_0005 DNA gyrase subunit B
LEUM_0747 DNA topoisomerase I
LEUM_1290 bacterial nucleoid protein Hbs
LEUM_1674 Recombinational DNA repair protein (RecE pathway)
LEUM_1976 ATP-dependent DNA helicase, RecQ-like protein
LEUM_1586 Nucleotidyltransferase/DNA polymerase for DNA repair
LEUM_0974 Nucleotidyltransferase/DNA polymerase for DNA repair
LEUM_1094 Nucleotidyltransferase/DNA polymerase for DNA repair
LEUM_1204 Transcriptional regulator, xre family
LEUM_0672 hypothetical protein, RecX family
LEUM_1384 Rad3-related DNA helicase
LEUM_0254 ribonucleoside-diphosphate reductase class Ib alpha subunit
LEUM_0256 ribonucleoside-diphosphate reductase class Ib beta subunit
LEUM_1585 Exopolyphosphatase-related protein
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
|
03029 Mitochondrial biogenesis [BR:lme03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293