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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:lpe03030]
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 lp12_1322 DNA polymerase III, epsilon subunit
lp12_0984 DNA polymerase III, alpha subunit
lp12_2745 DNA polymerase III subunits gamma and tau
lp12_1338 DNA polymerase III, delta prime subunit
lp12_1284 DNA polymerase III, delta subunit
lp12_2625 DNA polymerase III, chi subunit
lp12_0002 DNA polymerase III beta chain
lp12_0747 replicative DNA helicase
lp12_2353 DNA primase DnaG
lp12_1004 single strand DNA binding protein
lp12_0357 single strand binding protein
lp12_1321 ribonuclease HI
lp12_1311 ribonuclease HII
lp12_0100 DNA polymerase I
lp12_0980 DNA ligase
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K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:lpe03410]
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03420 Nucleotide excision repair [PATH:lpe03420]
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03430 Mismatch repair [PATH:lpe03430]
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lp12_1744 DNA mismatch repair protein MutS
lp12_2690 DNA mismatch repair protein MutL
lp12_1418 DNA mismatch repair protein MutH
lp12_1781 DNA dependent ATPase I and helicase II
lp12_0841 exonuclease VII, large subunit
lp12_2321 exodeoxyribonuclease VII small subunit
lp12_1399 single stranded DNA specific exonuclease RecJ
lp12_1004 single strand DNA binding protein
lp12_0357 single strand binding protein
lp12_0984 DNA polymerase III, alpha subunit
lp12_0002 DNA polymerase III beta chain
lp12_2745 DNA polymerase III subunits gamma and tau
lp12_1284 DNA polymerase III, delta subunit
lp12_1338 DNA polymerase III, delta prime subunit
lp12_1322 DNA polymerase III, epsilon subunit
lp12_2625 DNA polymerase III, chi subunit
lp12_0980 DNA ligase
lp12_0661 DNA adenine methylase
lp12_2016 DNA adenine methylase
lp12_2107 dam methylase
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K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
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03440 Homologous recombination [PATH:lpe03440]
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lp12_1399 single stranded DNA specific exonuclease RecJ
lp12_1004 single strand DNA binding protein
lp12_0357 single strand binding protein
lp12_0003 DNA recombination and repair protein ATPase RecF
lp12_0965 DNA repair protein RecO
lp12_2747 recombinational DNA repair protein RecR
lp12_1740 RecA bacterial DNA recombination protein
lp12_0100 DNA polymerase I
lp12_1225 Holliday junction DNA helicase RuvA
lp12_1514 Holliday junction DNA helicase RuvB
lp12_1224 crossover junction endodeoxyribonuclease RuvC
lp12_1974 ATP dependent DNA helicase RecG
lp12_2552 ATP-dependent DNA helicase
lp12_0984 DNA polymerase III, alpha subunit
lp12_0002 DNA polymerase III beta chain
lp12_2745 DNA polymerase III subunits gamma and tau
lp12_1284 DNA polymerase III, delta subunit
lp12_1338 DNA polymerase III, delta prime subunit
lp12_1322 DNA polymerase III, epsilon subunit
lp12_2625 DNA polymerase III, chi subunit
lp12_2855 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:lpe03000]
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03021 Transcription machinery [BR:lpe03021]
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03019 Messenger RNA biogenesis [BR:lpe03019]
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03041 Spliceosome [BR:lpe03041]
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03011 Ribosome [BR:lpe03011]
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03009 Ribosome biogenesis [BR:lpe03009]
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03016 Transfer RNA biogenesis [BR:lpe03016]
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03012 Translation factors [BR:lpe03012]
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03110 Chaperones and folding catalysts [BR:lpe03110]
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04131 Membrane trafficking [BR:lpe04131]
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04121 Ubiquitin system [BR:lpe04121]
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03051 Proteasome [BR:lpe03051]
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03032 DNA replication proteins [BR:lpe03032]
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lp12_1321 ribonuclease HI
lp12_1037 hypothetical protein
lp12_1797 HupB DNA binding protein HU-beta
lp12_2702 integration host factor (IHF) alpha subunit
lp12_2947 integration host factor beta subunit
lp12_0001 chromosomal replication initiator protein DnaA
lp12_0747 replicative DNA helicase
lp12_2353 DNA primase DnaG
lp12_1004 single strand DNA binding protein
lp12_0357 single strand binding protein
lp12_0984 DNA polymerase III, alpha subunit
lp12_0002 DNA polymerase III beta chain
lp12_2625 DNA polymerase III, chi subunit
lp12_1284 DNA polymerase III, delta subunit
lp12_1338 DNA polymerase III, delta prime subunit
lp12_1322 DNA polymerase III, epsilon subunit
lp12_2745 DNA polymerase III subunits gamma and tau
lp12_1311 ribonuclease HII
lp12_0100 DNA polymerase I
lp12_0980 DNA ligase
lp12_0661 DNA adenine methylase
lp12_2016 DNA adenine methylase
lp12_2107 dam methylase
lp12_2792 DnaA-like family protein
lp12_1355 DNA gyrase, A subunit
lp12_0004 DNA gyrase subunit B
lp12_2972 DNA topoisomerase IV subunit A
lp12_0699 DNA topoisomerase IV subunit B
lp12_2592 DNA topoisomerase I
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:lpe03036]
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03400 DNA repair and recombination proteins [BR:lpe03400]
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lp12_0397 methylated DNA protein cysteine S-methyltransferase
lp12_0216 deoxyribodipyrimidine photolyase
lp12_1638 uracil DNA glycosylase
lp12_0888 3-methyladenine DNA glycosylase
lp12_0920 A/G specific adenine glycosylase
lp12_2869 endonuclease III
lp12_1402 hypothetical protein
lp12_2398 mutator MutT protein
lp12_2479 deoxyuridinetriphosphatase
lp12_1130 transcription regulator protein
lp12_0209 hypothetical protein
lp12_0265 bacteriophage related DNA polymerase
lp12_0627 3-methyladenine DNA glycosylase
lp12_0562 formamidopyrimidine DNA glycosylase
lp12_0655 exodeoxyribonuclease III
lp12_0656 exodeoxyribonuclease III
lp12_1399 single stranded DNA specific exonuclease RecJ
lp12_0980 DNA ligase
lp12_0100 DNA polymerase I
lp12_0386 excinuclease ABC A subunit
lp12_0073 excinuclease ABC subunit B
lp12_2638 excinuclease ABC subunit
lp12_1781 DNA dependent ATPase I and helicase II
lp12_0323 hypothetical protein
lp12_0324 DNA-directed RNA polymerase beta' subunit
lp12_0355 DNA-directed RNA polymerase alpha subunit RpoA
lp12_1950 RNA polymerase omega subunit
lp12_0976 transcription repair coupling factor
lp12_1744 DNA mismatch repair protein MutS
lp12_2690 DNA mismatch repair protein MutL
lp12_1418 DNA mismatch repair protein MutH
lp12_0841 exonuclease VII, large subunit
lp12_2321 exodeoxyribonuclease VII small subunit
lp12_0984 DNA polymerase III, alpha subunit
lp12_0002 DNA polymerase III beta chain
lp12_2625 DNA polymerase III, chi subunit
lp12_1284 DNA polymerase III, delta subunit
lp12_1338 DNA polymerase III, delta prime subunit
lp12_1322 DNA polymerase III, epsilon subunit
lp12_2745 DNA polymerase III subunits gamma and tau
lp12_1004 single strand DNA binding protein
lp12_0357 single strand binding protein
lp12_0661 DNA adenine methylase
lp12_2016 DNA adenine methylase
lp12_2107 dam methylase
lp12_1039 patch repair protein
lp12_1740 RecA bacterial DNA recombination protein
lp12_1225 Holliday junction DNA helicase RuvA
lp12_1514 Holliday junction DNA helicase RuvB
lp12_1224 crossover junction endodeoxyribonuclease RuvC
lp12_2855 primosomal protein N'
lp12_2318 DNA repair protein RadA
lp12_0003 DNA recombination and repair protein ATPase RecF
lp12_1974 ATP dependent DNA helicase RecG
lp12_2552 ATP-dependent DNA helicase
lp12_0965 DNA repair protein RecO
lp12_2747 recombinational DNA repair protein RecR
lp12_2814 DNA repair protein RecN
lp12_1168 exonuclease involved in removal of stalled replication fork
lp12_0272 hypothetical protein
lp12_1355 DNA gyrase, A subunit
lp12_0004 DNA gyrase subunit B
lp12_2592 DNA topoisomerase I
lp12_1797 HupB DNA binding protein HU-beta
lp12_1308 hypothetical protein
lp12_0547 DNA binding protein Fis
lp12_1681 Fis transcriptional activator
lp12_2702 integration host factor (IHF) alpha subunit
lp12_2947 integration host factor beta subunit
lp12_0889 ATP-dependent DNA helicase RecQ
lp12_0559 DNA-damage inducible protein P
lp12_0999 UmuC
lp12_1641 SOS mutagenesis and repair UmuC protein
lp12_0998 SOS response transcriptional regulator
lp12_1642 SOS (error prone) mutagenesis protein UmuD (RumA)
lp12_1739 regulatory protein RecX
lp12_2806 ATP-dependent DNA helicase Rep
lp12_1861 ATP dependent DNA helicase (DEAD box family) Rad3
lp12_1712 ribonucleoside-diphosphate reductase, alpha subunit
lp12_1713 ribonucleoside-diphosphate reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:lpe03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12)