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09100 Metabolism
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09101 Carbohydrate metabolism
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09102 Energy metabolism
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09103 Lipid metabolism
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09104 Nucleotide metabolism
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09105 Amino acid metabolism
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00250 Alanine, aspartate and glutamate metabolism [PATH:lpj00250]
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JDM1_1277 aspartate racemase
JDM1_2195 L-asparaginase
JDM1_0794 asnA; asparagine synthetase AsnA
JDM1_2460 asnB2; asparagine synthase (glutamine-hydrolysing)
JDM1_0813 asnB1; asparagine synthase (glutamine-hydrolysing)
JDM1_0363 conserved hypothetical protein
JDM1_2272 aspA; aspartate ammonia-lyase
JDM1_0642 argG; argininosuccinate synthase
JDM1_0643 argH; argininosuccinate lyase
JDM1_2624 purA; adenylosuccinate synthase
JDM1_2623 purB; adenylosuccinate lyase
JDM1_2168 pyrB; aspartate carbamoyltransferase catalytic subunit
JDM1_2723 gadB; glutamate decarboxylase
JDM1_2465 gabD; succinate-semialdehyde dehydrogenase NADP+
JDM1_1013 gdh; glutamate dehydrogenase
JDM1_1325 glnA; glutamate-ammonia ligase
JDM1_2165 carB; carbamoyl phosphate synthase large subunit
JDM1_0426 carB; carbamoyl phosphate synthase large subunit
JDM1_1500 carbamoyl phosphate synthase large subunit
JDM1_2166 pyrAA; carbamoyl phosphate synthase small subunit
JDM1_0427 carA; carbamoyl phosphate synthase small subunit
JDM1_1499 pyrAA2; carbamoyl phosphate synthase small subunit
JDM1_2184 purQ; phosphoribosylformylglycinamidine synthase I
JDM1_0684 glmS1; D-fructose-6-phosphate amidotransferase
JDM1_2182 purF; amidophosphoribosyltransferase
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K01779 racD; aspartate racemase [EC:5.1.1.13]
K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K13566 NIT2; omega-amidase [EC:3.5.1.3]
K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
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00260 Glycine, serine and threonine metabolism [PATH:lpj00260]
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00270 Cysteine and methionine metabolism [PATH:lpj00270]
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00280 Valine, leucine and isoleucine degradation [PATH:lpj00280]
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00290 Valine, leucine and isoleucine biosynthesis [PATH:lpj00290]
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00300 Lysine biosynthesis [PATH:lpj00300]
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00310 Lysine degradation [PATH:lpj00310]
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00220 Arginine biosynthesis [PATH:lpj00220]
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00330 Arginine and proline metabolism [PATH:lpj00330]
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00340 Histidine metabolism [PATH:lpj00340]
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00350 Tyrosine metabolism [PATH:lpj00350]
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00360 Phenylalanine metabolism [PATH:lpj00360]
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00380 Tryptophan metabolism [PATH:lpj00380]
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00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lpj00400]
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09106 Metabolism of other amino acids
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09107 Glycan biosynthesis and metabolism
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09108 Metabolism of cofactors and vitamins
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09109 Metabolism of terpenoids and polyketides
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09110 Biosynthesis of other secondary metabolites
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09111 Xenobiotics biodegradation and metabolism
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09112 Not included in regular maps
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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01000 Enzymes [BR:lpj01000]
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01001 Protein kinases [BR:lpj01001]
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01009 Protein phosphatases and associated proteins [BR:lpj01009]
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01002 Peptidases and inhibitors [BR:lpj01002]
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JDM1_1496 lspA; signal peptidase II
JDM1_0540 pepC1; cysteine aminopeptidase
JDM1_2938 pepC2; cysteine aminopeptidase
JDM1_0761 guaA; bifunctional GMP synthase/glutamine amidotransferase protein
JDM1_0117 conserved hypothetical protein
JDM1_0354 plnG; bacteriocin ABC-transporter, ATP-binding and permease protein PlnG
JDM1_1813 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative)
JDM1_2724 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative)
JDM1_2029 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative)
JDM1_2182 purF; amidophosphoribosyltransferase
JDM1_0684 glmS1; D-fructose-6-phosphate amidotransferase
JDM1_2460 asnB2; asparagine synthase (glutamine-hydrolysing)
JDM1_0813 asnB1; asparagine synthase (glutamine-hydrolysing)
JDM1_0076 bsh2; choloylglycine hydrolase
JDM1_2068 bsh4; choloylglycine hydrolase
JDM1_2695 bsh3; choloylglycine hydrolase
JDM1_2822 bsh1; choloylglycine hydrolase
JDM1_0416 srtA; sortase
JDM1_0795 pepD3; dipeptidase
JDM1_0297 pepD2; dipeptidase
JDM1_0213 pepD1; dipeptidase
JDM1_1440 pepD4; dipeptidase
JDM1_2864 agrB; accesory gene regulator protein B
JDM1_2333 CAAX family protease
JDM1_0356 plnT; integral membrane protein PlnT
JDM1_0357 plnU; integral membrane protein PlnU, membrane-bound protease CAAX family
JDM1_0358 plnV; integral membrane protein plnV
JDM1_0267 CAAX family protease
JDM1_0765 CAAX family protease
JDM1_0599 CAAX family protease
JDM1_0359 plnW; integral membrane protein PlnW
JDM1_0266 CAAX family protease
JDM1_0780 pepN; membrane alanine aminopeptidase
JDM1_1862 pepF1; oligoendopeptidase F
JDM1_2745 pepO; endopeptidase PepO
JDM1_0836 dacB; serine-type D-Ala-D-Ala carboxypeptidase
JDM1_0636 aad; D-alanyl-D-alanine dipeptidase
JDM1_1116 pepV; dipeptidase PepV
JDM1_1617 dapE1; succinyl-diaminopimelate desuccinylase
JDM1_2292 dapE2; succinyl-diaminopimelate desuccinylase
JDM1_1600 pepT; peptidase T
JDM1_1896 amino acid amidohydrolase
JDM1_0229 pepM; methionyl aminopeptidase
JDM1_1891 pepQ; Xaa-Pro dipeptidase
JDM1_1336 pepP; Xaa-Pro aminopeptidase (putative)
JDM1_0445 ftsH; cell division protein FtsH, ATP-dependent zinc metallopeptidase
JDM1_0418 htpX; heat shock protein HtpX
JDM1_1711 zinc-dependent protease, membrane associated (putative)
JDM1_0056 htrA; serine protease HtrA
JDM1_1081 dacA2; serine-type D-Ala-D-Ala carboxypeptidase
JDM1_2551 dacA1; serine-type D-Ala-D-Ala carboxypeptidase
JDM1_0650 clpP; ATP-dependent Clp protease proteolytic subunit
JDM1_0503 Clp protease domain protein
JDM1_0714 pepX; x-prolyl-dipeptidyl aminopeptidase
JDM1_1788 lon; endopeptidase La (putative)
JDM1_1725 lexA; LexA repressor
JDM1_2939 sip3; signal peptidase I
JDM1_2298 sip1; signal peptidase I
JDM1_2299 sip2; signal peptidase I
JDM1_2340 pepR2; prolyl aminopeptidase
JDM1_0093 prolyl aminopeptidase
JDM1_0711 pepR1; prolyl aminopeptidase
JDM1_0094 prolyl aminopeptidase
JDM1_1566 ctpA; carboxy-terminal processing proteinase
JDM1_1319 conserved hypothetical protein
JDM1_1316 integral membrane protein
JDM1_1487 bacteriocin immunity protein (putative)
JDM1_0987 protease
JDM1_0046 prophage Lp3 protein 18
JDM1_1552 hslV; ATP-dependent protease peptidase subunit
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K03101 lspA; signal peptidase II [EC:3.4.23.36]
K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K07010 K07010; putative glutamine amidotransferase
K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
K07284 srtA; sortase A [EC:3.4.22.70]
K08659 pepDA; dipeptidase [EC:3.4.-.-]
K08659 pepDA; dipeptidase [EC:3.4.-.-]
K08659 pepDA; dipeptidase [EC:3.4.-.-]
K08659 pepDA; dipeptidase [EC:3.4.-.-]
K07813 agrB; accessory gene regulator B
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K01256 pepN; aminopeptidase N [EC:3.4.11.2]
K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
K07386 pepO; putative endopeptidase [EC:3.4.24.-]
K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
K04771 degP; serine protease Do [EC:3.4.21.107]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
K07177 K07177; Lon-like protease
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03100 lepB; signal peptidase I [EC:3.4.21.89]
K03100 lepB; signal peptidase I [EC:3.4.21.89]
K03100 lepB; signal peptidase I [EC:3.4.21.89]
K01259 pip; proline iminopeptidase [EC:3.4.11.5]
K01259 pip; proline iminopeptidase [EC:3.4.11.5]
K01259 pip; proline iminopeptidase [EC:3.4.11.5]
K01259 pip; proline iminopeptidase [EC:3.4.11.5]
K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
K05995 pepE; dipeptidase E [EC:3.4.13.21]
K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K06904 GP4; Escherichia/Staphylococcus phage prohead protease
K06904 GP4; Escherichia/Staphylococcus phage prohead protease
K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
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01003 Glycosyltransferases [BR:lpj01003]
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01005 Lipopolysaccharide biosynthesis proteins [BR:lpj01005]
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01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpj01011]
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01004 Lipid biosynthesis proteins [BR:lpj01004]
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01008 Polyketide biosynthesis proteins [BR:lpj01008]
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01006 Prenyltransferases [BR:lpj01006]
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01007 Amino acid related enzymes [BR:lpj01007]
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00199 Cytochrome P450
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00194 Photosynthesis proteins [BR:lpj00194]
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09182 Protein families: genetic information processing
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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