| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:mca03030]
|
 MCA0720 dnaQ; DNA polymerase III, epsilon subunit
MCA1286 dnaE; DNA polymerase III, alpha subunit
MCA1328 dnaZX; DNA polymerase III, gamma and tau subunits
MCA1995 holB; DNA polymerase III, delta prime subunit
MCA1451 holA; DNA polymerase III, delta subunit
MCA2098 putative DNA polymerase III, chi subunit
MCA3032 dnaN; DNA polymerase III, beta subunit
MCA1735 dnaB; replicative DNA helicase
MCA2993 dnaG; DNA primase
MCA2690 ssb; single-strand binding protein
MCA0719 rnhA; RNase H
MCA2443 rnhB; ribonuclease HII
MCA2573 polI; DNA polymerase I
MCA2438 ligA; DNA ligase, NAD-dependent
|
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
03410 Base excision repair [PATH:mca03410]
|
03420 Nucleotide excision repair [PATH:mca03420]
|
03430 Mismatch repair [PATH:mca03430]
|
MCA0576 mutS; DNA mismatch repair protein MutS
MCA0342 MutS family protein
MCA1692 mutL; DNA mismatch repair protein MutL
MCA1037 uvrD; DNA helicase II
MCA2382 sbcB; exodeoxyribonuclease I
MCA1818 xseA; exodeoxyribonuclease VII, large subunit
MCA0819 xseB; exodeoxyribonuclease VII, small subunit
MCA0628 recJ; single-stranded-DNA-specific exonuclease RecJ
MCA2690 ssb; single-strand binding protein
MCA1286 dnaE; DNA polymerase III, alpha subunit
MCA3032 dnaN; DNA polymerase III, beta subunit
MCA1328 dnaZX; DNA polymerase III, gamma and tau subunits
MCA1451 holA; DNA polymerase III, delta subunit
MCA1995 holB; DNA polymerase III, delta prime subunit
MCA0720 dnaQ; DNA polymerase III, epsilon subunit
MCA2098 putative DNA polymerase III, chi subunit
MCA2438 ligA; DNA ligase, NAD-dependent
|
K03555 mutS; DNA mismatch repair protein MutS
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
03440 Homologous recombination [PATH:mca03440]
|
MCA0628 recJ; single-stranded-DNA-specific exonuclease RecJ
MCA2690 ssb; single-strand binding protein
MCA3031 recF; DNA replication and repair protein RecF
MCA1461 recO; DNA repair protein RecO
MCA1326 recR; recombination protein RecR
MCA0387 recA; recA protein
MCA2573 polI; DNA polymerase I
MCA1222 ruvA; Holliday junction DNA helicase RuvA
MCA1223 ruvB; Holliday junction DNA helicase RuvB
MCA1221 ruvC; crossover junction endodeoxyribonuclease RuvC
MCA2025 recG; ATP-dependent DNA helicase RecG
MCA1892 conserved hypothetical protein
MCA3010 conserved hypothetical protein
MCA0691 recB; exodeoxyribonuclease V, beta subunit
MCA0690 recC; exodeoxyribonuclease V, gamma subunit
MCA0692 recD; exodeoxyribonuclease V, alpha subunit
MCA1286 dnaE; DNA polymerase III, alpha subunit
MCA3032 dnaN; DNA polymerase III, beta subunit
MCA1328 dnaZX; DNA polymerase III, gamma and tau subunits
MCA1451 holA; DNA polymerase III, delta subunit
MCA1995 holB; DNA polymerase III, delta prime subunit
MCA0720 dnaQ; DNA polymerase III, epsilon subunit
MCA2098 putative DNA polymerase III, chi subunit
MCA2594 priA; primosomal protein N`
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:mca03000]
|
03021 Transcription machinery [BR:mca03021]
|
03019 Messenger RNA biogenesis [BR:mca03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:mca03011]
|
03009 Ribosome biogenesis [BR:mca03009]
|
03016 Transfer RNA biogenesis [BR:mca03016]
|
03012 Translation factors [BR:mca03012]
|
03110 Chaperones and folding catalysts [BR:mca03110]
|
04131 Membrane trafficking [BR:mca04131]
|
04121 Ubiquitin system [BR:mca04121]
|
03051 Proteasome [BR:mca03051]
|
03032 DNA replication proteins [BR:mca03032]
|
MCA0719 rnhA; RNase H
MCA1616 C-5 cytosine-specific DNA methylase family protein
MCA0532 hupB; DNA-binding protein HU-beta
MCA2947 hup; prophage MuMc02, DNA-binding protein HU
MCA0699 ihfA; integration host factor, alpha subunit
MCA1411 ihfB; integration host factor, beta subunit
MCA1630 DnaA domain protein
MCA3033 dnaA; chromosomal replication initiator protein DnaA
MCA1735 dnaB; replicative DNA helicase
MCA2993 dnaG; DNA primase
MCA2690 ssb; single-strand binding protein
MCA1286 dnaE; DNA polymerase III, alpha subunit
MCA3032 dnaN; DNA polymerase III, beta subunit
MCA2098 putative DNA polymerase III, chi subunit
MCA1451 holA; DNA polymerase III, delta subunit
MCA1995 holB; DNA polymerase III, delta prime subunit
MCA0720 dnaQ; DNA polymerase III, epsilon subunit
MCA1328 dnaZX; DNA polymerase III, gamma and tau subunits
MCA2443 rnhB; ribonuclease HII
MCA2573 polI; DNA polymerase I
MCA2438 ligA; DNA ligase, NAD-dependent
MCA2522 DnaA domain protein
MCA1421 gyrA; DNA gyrase, A subunit
MCA3030 gyrB; DNA gyrase, B subunit
MCA0821 parC; DNA topoisomerase IV, A subunit
MCA0820 parE; DNA topoisomerase IV, B subunit
MCA2839 topA; DNA topoisomerase I
|
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
|
03036 Chromosome and associated proteins [BR:mca03036]
|
03400 DNA repair and recombination proteins [BR:mca03400]
|
MCA0584 ogt; methylated-DNA--protein-cysteine methyltransferase
MCA3092 ung; uracil-DNA glycosylase
MCA0857 mutY; A/G-specific adenine glycosylase
MCA2899 endonuclease III
MCA1678 putative nucleotide pyrophosphorylase
MCA0519 MutT/nudix family protein
MCA2783 dut; deoxyuridine 5'triphosphate nucleotidohydrolase
MCA2276 phage SPO1 DNA polymerase-related protein
MCA0358 tag; DNA-3-methyladenine glycosylase I
MCA3072 mutM; formamidopyrimidine-DNA glycosylase
MCA3070 xth-2; exodeoxyribonuclease III
MCA0321 xth-1; exodeoxyribonuclease III
MCA0045 endonuclease V
MCA0628 recJ; single-stranded-DNA-specific exonuclease RecJ
MCA2438 ligA; DNA ligase, NAD-dependent
MCA2573 polI; DNA polymerase I
MCA2694 uvrA; excinuclease ABC, A subunit
MCA2201 uvrB; excinuclease ABC, B subunit
MCA1681 uvrC; excinuclease ABC, C subunit
MCA1037 uvrD; DNA helicase II
MCA1066 rpoB; DNA-directed RNA polymerase, beta subunit
MCA1067 rpoC; DNA-directed RNA polymerase, beta' subunit
MCA2347 rpoA; DNA-directed RNA polymerase, alpha subunit
MCA2022 rpoZ; DNA-directed RNA polymerase, omega subunit
MCA1864 mfd; transcription-repair coupling factor
MCA0576 mutS; DNA mismatch repair protein MutS
MCA0342 MutS family protein
MCA1692 mutL; DNA mismatch repair protein MutL
MCA2382 sbcB; exodeoxyribonuclease I
MCA1818 xseA; exodeoxyribonuclease VII, large subunit
MCA0819 xseB; exodeoxyribonuclease VII, small subunit
MCA1286 dnaE; DNA polymerase III, alpha subunit
MCA3032 dnaN; DNA polymerase III, beta subunit
MCA2098 putative DNA polymerase III, chi subunit
MCA1451 holA; DNA polymerase III, delta subunit
MCA1995 holB; DNA polymerase III, delta prime subunit
MCA0720 dnaQ; DNA polymerase III, epsilon subunit
MCA1328 dnaZX; DNA polymerase III, gamma and tau subunits
MCA2690 ssb; single-strand binding protein
MCA1618 putative DNA mismatch endonuclease Vsr
MCA0691 recB; exodeoxyribonuclease V, beta subunit
MCA0690 recC; exodeoxyribonuclease V, gamma subunit
MCA0692 recD; exodeoxyribonuclease V, alpha subunit
MCA0387 recA; recA protein
MCA1222 ruvA; Holliday junction DNA helicase RuvA
MCA1223 ruvB; Holliday junction DNA helicase RuvB
MCA1221 ruvC; crossover junction endodeoxyribonuclease RuvC
MCA2594 priA; primosomal protein N`
MCA1385 radA; DNA repair protein RadA
MCA3031 recF; DNA replication and repair protein RecF
MCA2025 recG; ATP-dependent DNA helicase RecG
MCA1892 conserved hypothetical protein
MCA3010 conserved hypothetical protein
MCA1461 recO; DNA repair protein RecO
MCA1326 recR; recombination protein RecR
MCA1860 recN; DNA repair protein RecN
MCA0854 recombination-associated protein RdgC
MCA0651 CRISPR-associated protein Cas1
MCA0930 CRISPR-associated protein Cas1
MCA1421 gyrA; DNA gyrase, A subunit
MCA3030 gyrB; DNA gyrase, B subunit
MCA2839 topA; DNA topoisomerase I
MCA0532 hupB; DNA-binding protein HU-beta
MCA2947 hup; prophage MuMc02, DNA-binding protein HU
MCA1746 fis; DNA-binding protein Fis
MCA0699 ihfA; integration host factor, alpha subunit
MCA1411 ihfB; integration host factor, beta subunit
MCA1868 recQ; ATP-dependent DNA helicase RecQ
MCA0474 ATP-dependent DNA helicase, UvrD/REP family
MCA1863 putative regulator protein
MCA2167 lexA; LexA repressor
MCA2165 conserved hypothetical protein
MCA2164 putative DNA polymerase III, alpha subunit
MCA0033 DNA-damage-inducible protein D
MCA0388 recX; recX protein
MCA1213 conserved hypothetical protein
MCA2140 rep; ATP-dependent DNA helicase Rep
MCA1991 putative ATP-dependent helicase
MCA1579 ATP-dependent RNA helicase, DEAD/DEAH box family
MCA0333 MutT/nudix family protein
MCA1634 nrdA; ribonucleoside-diphosphate reductase, alpha subunit
MCA2543 ribonucleoside reductase precursor
MCA1637 nrdB; ribonucleoside-diphosphate reductase, beta subunit
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K14623 dinD; DNA-damage-inducible protein D
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
|
03029 Mitochondrial biogenesis [BR:mca03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Methylococcus capsulatus