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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:meh03030]
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03410 Base excision repair [PATH:meh03410]
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03420 Nucleotide excision repair [PATH:meh03420]
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03430 Mismatch repair [PATH:meh03430]
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03440 Homologous recombination [PATH:meh03440]
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 M301_1806 phosphoesterase DHHA1
M301_1807 phosphoesterase RecJ domain protein
M301_2543 single-strand binding protein
M301_1942 DNA repair protein RecO
M301_0958 recombination protein RecR
M301_2185 recA protein
M301_0399 DNA polymerase I
M301_2519 Holliday junction DNA helicase RuvA
M301_2513 Holliday junction DNA helicase RuvB
M301_2520 crossover junction endodeoxyribonuclease RuvC
M301_0088 ATP-dependent DNA helicase RecG
M301_1633 DNA polymerase III, alpha subunit
M301_0002 DNA polymerase III, beta subunit
M301_0960 DNA polymerase III, subunits gamma and tau
M301_0588 DNA polymerase III, delta subunit
M301_1348 DNA polymerase III, delta prime subunit
M301_1520 DNA polymerase III, epsilon subunit
M301_0277 DNA polymerase III chi subunit HolC
M301_2771 primosomal protein N'
M301_1434 single-strand binding protein/primosomal replication protein N
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:meh03000]
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03021 Transcription machinery [BR:meh03021]
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03019 Messenger RNA biogenesis [BR:meh03019]
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03041 Spliceosome
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03011 Ribosome [BR:meh03011]
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03009 Ribosome biogenesis [BR:meh03009]
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03016 Transfer RNA biogenesis [BR:meh03016]
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03012 Translation factors [BR:meh03012]
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03110 Chaperones and folding catalysts [BR:meh03110]
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04131 Membrane trafficking [BR:meh04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:meh03051]
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03032 DNA replication proteins [BR:meh03032]
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03036 Chromosome and associated proteins [BR:meh03036]
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03400 DNA repair and recombination proteins [BR:meh03400]
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M301_2499 methylated-DNA/protein-cysteine methyltransferase
M301_2328 Deoxyribodipyrimidine photo-lyase
M301_2163 Deoxyribodipyrimidine photo-lyase
M301_0155 DNA photolyase FAD-binding protein
M301_2432 uracil-DNA glycosylase
M301_2748 A/G-specific adenine glycosylase
M301_2379 endonuclease III
M301_0522 thiamine monophosphate synthase
M301_0368 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
M301_2124 deoxyribodipyrimidine photolyase-related protein
M301_2671 2OG-Fe(II) oxygenase
M301_2300 conserved hypothetical protein
M301_2685 DNA-3-methyladenine glycosylase II
M301_0187 DNA-3-methyladenine glycosylase I
M301_2101 formamidopyrimidine-DNA glycosylase
M301_0218 exodeoxyribonuclease III Xth
M301_2595 exodeoxyribonuclease III Xth
M301_1806 phosphoesterase DHHA1
M301_1807 phosphoesterase RecJ domain protein
M301_1379 DNA ligase, NAD-dependent
M301_0399 DNA polymerase I
M301_2545 excinuclease ABC, A subunit
M301_1437 excinuclease ABC, B subunit
M301_0711 excinuclease ABC, C subunit
M301_0404 UvrD/REP helicase
M301_0329 DNA-directed RNA polymerase, beta subunit
M301_0330 DNA-directed RNA polymerase, beta' subunit
M301_0361 DNA-directed RNA polymerase, alpha subunit
M301_0086 DNA-directed RNA polymerase, omega subunit
M301_1675 transcription-repair coupling factor
M301_1962 DNA mismatch repair protein MutS
M301_1487 DNA mismatch repair protein MutL
M301_1933 exodeoxyribonuclease VII, large subunit
M301_0618 exodeoxyribonuclease VII, small subunit
M301_1633 DNA polymerase III, alpha subunit
M301_0002 DNA polymerase III, beta subunit
M301_0277 DNA polymerase III chi subunit HolC
M301_0588 DNA polymerase III, delta subunit
M301_1348 DNA polymerase III, delta prime subunit
M301_1520 DNA polymerase III, epsilon subunit
M301_0960 DNA polymerase III, subunits gamma and tau
M301_2543 single-strand binding protein
M301_2185 recA protein
M301_2519 Holliday junction DNA helicase RuvA
M301_2513 Holliday junction DNA helicase RuvB
M301_2520 crossover junction endodeoxyribonuclease RuvC
M301_2771 primosomal protein N'
M301_1434 single-strand binding protein/primosomal replication protein N
M301_1430 DNA repair protein RadA
M301_0088 ATP-dependent DNA helicase RecG
M301_1942 DNA repair protein RecO
M301_0958 recombination protein RecR
M301_2006 DNA repair protein RecN
M301_0843 putative exonuclease RdgC
M301_1216 protein of unknown function DUF853 NPT hydrolase putative
M301_1186 DNA gyrase, A subunit
M301_0003 DNA gyrase, B subunit
M301_0281 DNA topoisomerase I
M301_0989 histone family protein DNA-binding protein
M301_1530 histone family protein DNA-binding protein
M301_0390 transcriptional regulator, Fis family
M301_1747 integration host factor, alpha subunit
M301_1615 integration host factor, beta subunit
M301_1144 ATP-dependent DNA helicase RecQ
M301_1869 DNA-directed DNA polymerase
M301_2194 DNA-directed DNA polymerase
M301_2195 Peptidase S24/S26A/S26B, conserved region
M301_2214 Peptidase S24/S26A/S26B, conserved region
M301_2186 regulatory protein RecX
M301_0878 UvrD/REP helicase
M301_0431 helicase c2
M301_2724 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
M301_1051 ribonucleoside-diphosphate reductase, alpha subunit
M301_1050 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:meh03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Methylotenera versatilis