|
KO |
09100 Metabolism
|
|
|
09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:mge03030]
|
03410 Base excision repair [PATH:mge03410]
|
03420 Nucleotide excision repair [PATH:mge03420]
|
03430 Mismatch repair [PATH:mge03430]
|
03440 Homologous recombination [PATH:mge03440]
|
MG_091 single-strand binding protein family
MG_339 recA; recA protein (recombinase A)
MG_358 ruvA; Holliday junction DNA helicase
MG_359 ruvB; Holliday junction DNA helicase RuvB
MG_261 polC-2; DNA polymerase III, alpha subunit
MG_031 polC; DNA polymerase III, alpha subunit, Gram-positive type
MG_001 dnaN; DNA polymerase III, beta subunit
MG_419 DNA polymerase III, subunit gamma and tau
MG_315 DNA polymerase III, delta subunit, putative
MG_007 DNA polymerase III delta prime subunit, putative
|
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:mge03000]
|
03021 Transcription machinery [BR:mge03021]
|
03019 Messenger RNA biogenesis [BR:mge03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:mge03011]
|
03009 Ribosome biogenesis [BR:mge03009]
|
03016 Transfer RNA biogenesis [BR:mge03016]
|
03012 Translation factors [BR:mge03012]
|
03110 Chaperones and folding catalysts [BR:mge03110]
|
04131 Membrane trafficking [BR:mge04131]
|
04121 Ubiquitin system
|
03051 Proteasome
|
03032 DNA replication proteins [BR:mge03032]
|
03036 Chromosome and associated proteins [BR:mge03036]
|
03400 DNA repair and recombination proteins [BR:mge03400]
|
MG_097 uracil-DNA glycosylase, putative
MG_498 mutM; formamidopyrimidine-DNA glycosylase
MG_235 apurinic endonuclease (APN1)
MG_254 ligA; DNA ligase, NAD-dependent
MG_421 uvrA; excinuclease ABC, A subunit
MG_073 uvrB; excinuclease ABC, B subunit
MG_206 excinuclease ABC, C subunit
MG_244 UvrD/REP helicase
MG_341 rpoB; DNA-directed RNA polymerase, beta subunit
MG_340 rpoC; DNA-directed RNA polymerase, beta' subunit
MG_177 rpoA; DNA-directed RNA polymerase, alpha subunit
MG_022 DNA-directed RNA polymerase, delta subunit
MG_261 polC-2; DNA polymerase III, alpha subunit
MG_031 polC; DNA polymerase III, alpha subunit, Gram-positive type
MG_001 dnaN; DNA polymerase III, beta subunit
MG_315 DNA polymerase III, delta subunit, putative
MG_007 DNA polymerase III delta prime subunit, putative
MG_419 DNA polymerase III, subunit gamma and tau
MG_091 single-strand binding protein family
MG_339 recA; recA protein (recombinase A)
MG_358 ruvA; Holliday junction DNA helicase
MG_359 ruvB; Holliday junction DNA helicase RuvB
MG_352 recU; recombination protein U
MG_004 gyrA; DNA gyrase, A subunit
MG_003 gyrB; DNA gyrase, B subunit
MG_122 topA; DNA topoisomerase I
MG_353 DNA-binding protein HU, putative
MG_360 ImpB/MucB/SamB family protein
MG_231 nrdE; ribonucleoside-diphosphate reductase, alpha chain
MG_229 nrdF; ribonucleoside-diphosphate reductase, beta chain
MG_190 phosphoesterase, DHH subfamily 1
MG_371 DHH family protein
|
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03700 recU; recombination protein U
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
|
03029 Mitochondrial biogenesis [BR:mge03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|