09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:mtk03030]
03410 Base excision repair [PATH:mtk03410]
TBSG_03740 endonuclease III nth TBSG_01000 uracil-DNA glycosylase ung TBSG_03655 adenine glycosylase mutY TBSG_02319 3-methyladenine DNA glycosylase mpg TBSG_01055 formamidopyrimidine-DNA glycosylase fpg TBSG_03066 formamidopyrimidine-DNA glycosylase TBSG_01519 DNA glycosylase TBSG_03368 endonuclease VIII nei TBSG_02677 ada regulatory protein alkA TBSG_02786 DNA-3-methyladenine glycosylase I tagA TBSG_02736 conserved hypothetical protein TBSG_00431 exodeoxyribonuclease III protein xthA TBSG_00687 endonuclease IV end TBSG_02377 DNA polymerase I polA TBSG_00962 NAD-dependent DNA ligase ligA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:mtk03420]
03430 Mismatch repair [PATH:mtk03430]
03440 Homologous recombination [PATH:mtk03440]
03450 Non-homologous end-joining [PATH:mtk03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:mtk03000]
03021 Transcription machinery [BR:mtk03021]
03019 Messenger RNA biogenesis [BR:mtk03019]
03041 Spliceosome
03011 Ribosome [BR:mtk03011]
03009 Ribosome biogenesis [BR:mtk03009]
03016 Transfer RNA biogenesis [BR:mtk03016]
03012 Translation factors [BR:mtk03012]
03110 Chaperones and folding catalysts [BR:mtk03110]
04131 Membrane trafficking [BR:mtk04131]
04121 Ubiquitin system [BR:mtk04121]
03051 Proteasome [BR:mtk03051]
03032 DNA replication proteins [BR:mtk03032]
03036 Chromosome and associated proteins [BR:mtk03036]
03400 DNA repair and recombination proteins [BR:mtk03400]
TBSG_02678 methylated-DNA-protein-cysteine methyltransferase ogt TBSG_01000 uracil-DNA glycosylase ung TBSG_02319 3-methyladenine DNA glycosylase mpg TBSG_03655 adenine glycosylase mutY TBSG_03740 endonuclease III nth TBSG_03149 DNA helicase ercc3 TBSG_02835 mutator protein mutT TBSG_00417 mutator protein mutT3 TBSG_02413 conserved hypothetical protein TBSG_01287 deoxyuridine 5-triphosphate nucleotidohydrolase dut TBSG_02736 conserved hypothetical protein TBSG_02677 ada regulatory protein alkA TBSG_02786 DNA-3-methyladenine glycosylase I tagA TBSG_01055 formamidopyrimidine-DNA glycosylase fpg TBSG_03066 formamidopyrimidine-DNA glycosylase TBSG_01519 DNA glycosylase TBSG_03368 endonuclease VIII nei TBSG_00431 exodeoxyribonuclease III protein xthA TBSG_00687 endonuclease IV end TBSG_00962 NAD-dependent DNA ligase ligA TBSG_02377 DNA polymerase I polA TBSG_02368 excinuclease ABC subunit A uvrA TBSG_02373 excinuclease ABC subunit B uvrB TBSG_02572 excinuclease ABC subunit C uvrC TBSG_03060 ATP-dependent DNA helicase II uvrD1 TBSG_03262 ATP-dependent DNA helicase II uvrD2 TBSG_03266 ATP-dependent DNA helicase TBSG_00683 DNA-directed RNA polymerase subunit beta rpoB TBSG_00684 DNA-directed RNA polymerase subunit beta rpoC TBSG_03527 DNA-directed RNA polymerase subunit alpha rpoA TBSG_02603 DNA-directed RNA polymerase subunit omega rpoZ TBSG_02987 transcription-repair coupling factor mfd TBSG_02891 exodeoxyribonuclease VII large subunit xseA TBSG_02892 exodeoxyribonuclease VII small subunit xseB TBSG_02442 DNA polymerase subunit III alpha dnaE1 TBSG_00002 DNA polymerase subunit III beta dnaN TBSG_01571 conserved hypothetical protein TBSG_03708 DNA polymerase TBSG_01801 conserved hypothetical protein TBSG_03779 DNA polymerase III epsilon subunit dnaQ TBSG_03789 DNA polymerase III gamma/tau subunit dnaZ/X TBSG_01505 conserved hypothetical protein TBSG_00053 single-strand binding protein ssb TBSG_00643 exonuclease subunit V beta recB TBSG_00644 exonuclease subunit V gamma recC TBSG_00642 exonuclease subunit V alpha recD TBSG_01249 recombination protein recA TBSG_01389 holliday junction DNA helicase ruvA TBSG_01390 holliday junction DNA helicase ruvB TBSG_01388 crossover junction endodeoxyribonuclease ruvC TBSG_02590 primosomal protein N priA TBSG_03651 DNA repair protein radA TBSG_00003 DNA replication and repair protein recF TBSG_01004 ATP-dependent DNA helicase recG TBSG_01622 conserved hypothetical protein TBSG_03783 recombination protein recR TBSG_02312 DNA repair protein recN TBSG_01165 conserved hypothetical protein TBSG_01472 conserved hypothetical protein TBSG_03072 conserved hypothetical protein TBSG_03071 ATP dependent DNA ligase TBSG_00006 DNA gyrase subunit A gyrA TBSG_00005 DNA gyrase subunit B gyrB TBSG_03710 DNA topoisomerase I topA TBSG_00990 hypothetical protein TBSG_00917 DNA-damage-inducible protein P dinP TBSG_02452 DNA polymerase IV dinX TBSG_01265 repressor lexA TBSG_03466 conserved hypothetical protein TBSG_03444 DNA polymerase subunit III alpha dnaE2 TBSG_01250 regulatory protein recX TBSG_02663 ATP-dependent helicase dinG TBSG_03367 ATP-dependent helicase lhr TBSG_00991 hydrolase mutT1 TBSG_02308 conserved hypothetical protein TBSG_00581 ribonucleoside-diphosphate reductase large subunit nrdZ TBSG_00922 ribonucleoside-diphosphate reductase subunit alpha nrdE TBSG_00925 ribonucleoside-diphosphate reductase subunit beta nrdF2 TBSG_00237 ribonucleoside-diphosphate reductase subunit beta nrdB TBSG_02020 ribonucleoside-diphosphate reductase subunit beta nrdF1 TBSG_01144 conserved hypothetical protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K15342 cas1; CRISP-associated protein Cas1 K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4] K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:mtk03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Mycobacterium tuberculosis KZN 4207 KEGG Orthology (KO) - Mycobacterium tuberculosis KZN 4207