| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
03020 RNA polymerase [PATH:ngr03020]
|
03022 Basal transcription factors [PATH:ngr03022]
|
 NAEGRDRAFT_88235 hypothetical protein
NAEGRDRAFT_63919 hypothetical protein
NAEGRDRAFT_58428 transcription initiation factor
NAEGRDRAFT_78851 TATA-box binding protein
NAEGRDRAFT_48788 hypothetical protein
NAEGRDRAFT_65369 hypothetical protein
NAEGRDRAFT_71677 hypothetical protein
NAEGRDRAFT_81220 transcription initiation factor TFIID subunit
NAEGRDRAFT_1097 hypothetical protein
NAEGRDRAFT_4666 hypothetical protein
NAEGRDRAFT_45427 hypothetical protein
NAEGRDRAFT_5555 hypothetical protein
NAEGRDRAFT_61798 AM36; hypothetical protein
NAEGRDRAFT_76715 hypothetical protein
NAEGRDRAFT_77700 transcription initiation factor IIF, beta subunit
NAEGRDRAFT_61113 hypothetical protein
NAEGRDRAFT_34964 RNA polymerase II transcription factor TFIIH subunit
NAEGRDRAFT_68603 hypothetical protein
NAEGRDRAFT_68362 hypothetical protein
NAEGRDRAFT_50960 hypothetical protein
NAEGRDRAFT_29347 hypothetical protein
NAEGRDRAFT_80698 DNA repair helicase UVH6
NAEGRDRAFT_2502 hypothetical protein
NAEGRDRAFT_50931 cyclin box fold domain-containing protein
|
K03122 TFIIA1; transcription initiation factor TFIIA large subunit
K03123 TFIIA2; transcription initiation factor TFIIA small subunit
K03124 TFIIB; transcription initiation factor TFIIB
K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
K03128 TAF2; transcription initiation factor TFIID subunit 2
K03134 TAF10; transcription initiation factor TFIID subunit 10
K03130 TAF5; transcription initiation factor TFIID subunit 5
K03131 TAF6; transcription initiation factor TFIID subunit 6
K03133 TAF9B; transcription initiation factor TFIID subunit 9B
K03135 TAF11; transcription initiation factor TFIID subunit 11
K03127 TAF13; transcription initiation factor TFIID subunit 13
K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
|
03040 Spliceosome [PATH:ngr03040]
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:ngr03030]
|
03410 Base excision repair [PATH:ngr03410]
|
03420 Nucleotide excision repair [PATH:ngr03420]
|
NAEGRDRAFT_5552 hypothetical protein
NAEGRDRAFT_31512 hypothetical protein
NAEGRDRAFT_82942 damage-specific DNA binding protein 1
NAEGRDRAFT_78097 rad23 protein
NAEGRDRAFT_82093 DEAD/DEAH box helicase
NAEGRDRAFT_51024 RNA polymerase II
NAEGRDRAFT_58671 RNA polymerase II largest subunit
NAEGRDRAFT_59892 DNA-directed RNA polymerase II
NAEGRDRAFT_61034 hypothetical protein
NAEGRDRAFT_64024 hypothetical protein
NAEGRDRAFT_29724 hypothetical protein
NAEGRDRAFT_33993 hypothetical protein
NAEGRDRAFT_74650 hypothetical protein
NAEGRDRAFT_71611 hypothetical protein
NAEGRDRAFT_72143 hypothetical protein
NAEGRDRAFT_88233 hypothetical protein
NAEGRDRAFT_61926 hypothetical protein
NAEGRDRAFT_29567 hypothetical protein
NAEGRDRAFT_2502 hypothetical protein
NAEGRDRAFT_50931 cyclin box fold domain-containing protein
NAEGRDRAFT_50960 hypothetical protein
NAEGRDRAFT_29347 hypothetical protein
NAEGRDRAFT_80698 DNA repair helicase UVH6
NAEGRDRAFT_61113 hypothetical protein
NAEGRDRAFT_34964 RNA polymerase II transcription factor TFIIH subunit
NAEGRDRAFT_68603 hypothetical protein
NAEGRDRAFT_68362 hypothetical protein
NAEGRDRAFT_48232 hypothetical protein
NAEGRDRAFT_78091 single-stranded DNA-binding replication protein A large subunit
NAEGRDRAFT_81289 hypothetical protein
NAEGRDRAFT_62722 hypothetical protein
NAEGRDRAFT_62721 hypothetical protein
NAEGRDRAFT_54247 hypothetical protein
NAEGRDRAFT_44642 hypothetical protein
NAEGRDRAFT_71662 hypothetical protein
NAEGRDRAFT_59151 hypothetical protein
NAEGRDRAFT_63811 hypothetical protein
NAEGRDRAFT_53490 hypothetical protein
NAEGRDRAFT_66232 hypothetical protein
NAEGRDRAFT_35238 PCNA proliferating cell nuclear antigen
NAEGRDRAFT_66154 replication factor C large subunit
NAEGRDRAFT_68675 hypothetical protein
NAEGRDRAFT_44707 hypothetical protein
NAEGRDRAFT_29498 hypothetical protein
NAEGRDRAFT_29162 hypothetical protein
|
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K10839 RAD23; UV excision repair protein RAD23
K10841 ERCC6; DNA excision repair protein ERCC-6
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10846 ERCC5; DNA excision repair protein ERCC-5
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10849 ERCC1; DNA excision repair protein ERCC-1
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
|
03430 Mismatch repair [PATH:ngr03430]
|
03440 Homologous recombination [PATH:ngr03440]
|
03450 Non-homologous end-joining [PATH:ngr03450]
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:ngr03000]
|
03021 Transcription machinery [BR:ngr03021]
|
NAEGRDRAFT_51024 RNA polymerase II
NAEGRDRAFT_58671 RNA polymerase II largest subunit
NAEGRDRAFT_59892 DNA-directed RNA polymerase II
NAEGRDRAFT_61034 hypothetical protein
NAEGRDRAFT_29567 hypothetical protein
NAEGRDRAFT_64024 hypothetical protein
NAEGRDRAFT_74650 hypothetical protein
NAEGRDRAFT_72143 hypothetical protein
NAEGRDRAFT_29724 hypothetical protein
NAEGRDRAFT_33993 hypothetical protein
NAEGRDRAFT_71611 hypothetical protein
NAEGRDRAFT_61926 hypothetical protein
NAEGRDRAFT_88233 hypothetical protein
NAEGRDRAFT_88235 hypothetical protein
NAEGRDRAFT_63919 hypothetical protein
NAEGRDRAFT_58428 transcription initiation factor
NAEGRDRAFT_78851 TATA-box binding protein
NAEGRDRAFT_48788 hypothetical protein
NAEGRDRAFT_65369 hypothetical protein
NAEGRDRAFT_81220 transcription initiation factor TFIID subunit
NAEGRDRAFT_1097 hypothetical protein
NAEGRDRAFT_4666 hypothetical protein
NAEGRDRAFT_71677 hypothetical protein
NAEGRDRAFT_45427 hypothetical protein
NAEGRDRAFT_5555 hypothetical protein
NAEGRDRAFT_61798 AM36; hypothetical protein
NAEGRDRAFT_76715 hypothetical protein
NAEGRDRAFT_77700 transcription initiation factor IIF, beta subunit
NAEGRDRAFT_61113 hypothetical protein
NAEGRDRAFT_34964 RNA polymerase II transcription factor TFIIH subunit
NAEGRDRAFT_68603 hypothetical protein
NAEGRDRAFT_68362 hypothetical protein
NAEGRDRAFT_50960 hypothetical protein
NAEGRDRAFT_29347 hypothetical protein
NAEGRDRAFT_80698 DNA repair helicase UVH6
NAEGRDRAFT_2502 hypothetical protein
NAEGRDRAFT_50931 cyclin box fold domain-containing protein
NAEGRDRAFT_61462 AM43; hypothetical protein
NAEGRDRAFT_64535 hypothetical protein
NAEGRDRAFT_79577 diaphanous-related formin
NAEGRDRAFT_66495 hypothetical protein
NAEGRDRAFT_65043 hypothetical protein
NAEGRDRAFT_34339 hypothetical protein
NAEGRDRAFT_70082 hypothetical protein
NAEGRDRAFT_34974 hypothetical protein
NAEGRDRAFT_64052 hypothetical protein
NAEGRDRAFT_60527 histone acetyltransferase gcn5
NAEGRDRAFT_62046 hypothetical protein
NAEGRDRAFT_51665 hypothetical protein
NAEGRDRAFT_81671 hypothetical protein
NAEGRDRAFT_50702 hypothetical protein
NAEGRDRAFT_59107 ubiquitin specific protease-like protein
NAEGRDRAFT_45594 hypothetical protein
NAEGRDRAFT_77946 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
NAEGRDRAFT_64978 bromodomain-containing protein
NAEGRDRAFT_64610 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin
NAEGRDRAFT_70690 hypothetical protein
NAEGRDRAFT_80805 hypothetical protein
NAEGRDRAFT_50018 hypothetical protein
NAEGRDRAFT_61662 hypothetical protein
NAEGRDRAFT_80983 CPSF A subunit
NAEGRDRAFT_72801 hypothetical protein
NAEGRDRAFT_4809 hypothetical protein
NAEGRDRAFT_56375 hypothetical protein
NAEGRDRAFT_80124 symplekin
NAEGRDRAFT_50257 hypothetical protein
NAEGRDRAFT_79174 5'-3' exoribonuclease 1
NAEGRDRAFT_57596 5'-3' exoribonuclease
NAEGRDRAFT_53150 hypothetical protein
NAEGRDRAFT_35433 rotamase domain-containing protein
NAEGRDRAFT_53621 hypothetical protein
NAEGRDRAFT_61248 hypothetical protein
NAEGRDRAFT_47250 hypothetical protein
NAEGRDRAFT_53398 hypothetical protein
NAEGRDRAFT_61368 hypothetical protein
NAEGRDRAFT_71340 AM37; hypothetical protein
NAEGRDRAFT_82109 hypothetical protein
NAEGRDRAFT_45643 hypothetical protein
NAEGRDRAFT_35388 TATA-binding protein-associated factor 172
NAEGRDRAFT_45181 hypothetical protein
NAEGRDRAFT_68261 hypothetical protein
NAEGRDRAFT_45146 TFIIF CTD phosphatase Fcp1
NAEGRDRAFT_80218 NLI interacting factor domain-containing protein
NAEGRDRAFT_66738 hypothetical protein
NAEGRDRAFT_4263 hypothetical protein
NAEGRDRAFT_61190 hypothetical protein
NAEGRDRAFT_61414 hypothetical protein
NAEGRDRAFT_78262 TPR repeat domain protein
NAEGRDRAFT_78346 transcriptional repressor TUP1
NAEGRDRAFT_79260 TPR repeat domain-containing protein
NAEGRDRAFT_81157 hypothetical protein
NAEGRDRAFT_29598 hypothetical protein
NAEGRDRAFT_79112 ATP binding domain family protein
NAEGRDRAFT_44893 hypothetical protein
NAEGRDRAFT_31952 hypothetical protein
NAEGRDRAFT_35014 hypothetical protein
NAEGRDRAFT_29098 hypothetical protein
NAEGRDRAFT_80573 13 to 16 kDa subunit of RNA polymerase
NAEGRDRAFT_66106 hypothetical protein
NAEGRDRAFT_77856 DNA-directed RNA polymerase III RPC4, polypeptide D
NAEGRDRAFT_52042 hypothetical protein
NAEGRDRAFT_29241 hypothetical protein
NAEGRDRAFT_29266 hypothetical protein
NAEGRDRAFT_69676 hypothetical protein
NAEGRDRAFT_61196 transcription factor
NAEGRDRAFT_53891 hypothetical protein
NAEGRDRAFT_78613 hypothetical protein
NAEGRDRAFT_61241 hypothetical protein
NAEGRDRAFT_64687 WD40 domain-containing protein
NAEGRDRAFT_79599 transcription factor IIIC-gamma subunit
NAEGRDRAFT_57146 RNA polymerase III transcription factor TFIIIC subunit
NAEGRDRAFT_61253 hypothetical protein
NAEGRDRAFT_47843 hypothetical protein
NAEGRDRAFT_61596 hypothetical protein
NAEGRDRAFT_52953 hypothetical protein
NAEGRDRAFT_60899 hypothetical protein
NAEGRDRAFT_61958 hypothetical protein
NAEGRDRAFT_56505 SRP40 domain-containing protein
|
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03122 TFIIA1; transcription initiation factor TFIIA large subunit
K03123 TFIIA2; transcription initiation factor TFIIA small subunit
K03124 TFIIB; transcription initiation factor TFIIB
K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
K03128 TAF2; transcription initiation factor TFIID subunit 2
K03130 TAF5; transcription initiation factor TFIID subunit 5
K03131 TAF6; transcription initiation factor TFIID subunit 6
K03133 TAF9B; transcription initiation factor TFIID subunit 9B
K03134 TAF10; transcription initiation factor TFIID subunit 10
K03135 TAF11; transcription initiation factor TFIID subunit 11
K03127 TAF13; transcription initiation factor TFIID subunit 13
K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K15128 MED6; mediator of RNA polymerase II transcription subunit 6
K13528 MED20; mediator of RNA polymerase II transcription subunit 20
K15146 MED4; mediator of RNA polymerase II transcription subunit 4
K15148 MED7; mediator of RNA polymerase II transcription subunit 7
K15156 MED14; mediator of RNA polymerase II transcription subunit 14
K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
K15161 CCNC; cyclin-C
K15166 MED23; mediator of RNA polymerase II transcription subunit 23
K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
K08874 TRRAP; transformation/transcription domain-associated protein
K11313 SUPT3H; transcription initiation protein SPT3
K11314 TADA2A; transcriptional adapter 2-alpha
K11364 SGF29; SAGA-associated factor 29
K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
K12830 SF3B3; splicing factor 3B subunit 3
K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
K11757 PBRM1; protein polybromo-1
K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
K15171 SUPT4H1; transcription elongation factor SPT4
K15172 SUPT5H; transcription elongation factor SPT5
K11292 SUPT6H; transcription elongation factor SPT6
K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
K06100 SYMPK; symplekin
K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
K15559 RTT103; regulator of Ty1 transposition protein 103
K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
K15174 PAF1; RNA polymerase II-associated factor 1
K15175 CDC73; parafibromin
K15176 CTR9; RNA polymerase-associated protein CTR9
K15177 LEO1; RNA polymerase-associated protein LEO1
K15178 RTF1; RNA polymerase-associated protein RTF1
K15181 TH1L; negative elongation factor C/D
K15186 EAF; ELL-associated factor
K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
K21751 DR1; down-regulator of transcription 1
K15193 SPTY2D1; protein SPT2
K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
K17498 SPN1; transcription factor SPN1
K20826 RPAP1; RNA polymerase II-associated protein 1
K23002 RPAP3; RNA polymerase II-associated protein 3
K06666 TUP1; general transcriptional corepressor TUP1
K06665 SSN6; general transcriptional corepressor CYC8
K12412 MCM1; pheromone receptor transcription factor
K24104 GPN; GPN-loop GTPase
K24104 GPN; GPN-loop GTPase
K24104 GPN; GPN-loop GTPase
K24104 GPN; GPN-loop GTPase
K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
K15196 BRF1; transcription factor IIIB 90 kDa subunit
K15196 BRF1; transcription factor IIIB 90 kDa subunit
K15198 BDP1; transcription factor TFIIIB component B''
K15199 GTF3C1; general transcription factor 3C polypeptide 1
K15200 GTF3C2; general transcription factor 3C polypeptide 2
K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
K15210 SNAPC3; snRNA-activating protein complex subunit 3
K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1
|
03019 Messenger RNA biogenesis [BR:ngr03019]
|
03041 Spliceosome [BR:ngr03041]
|
03011 Ribosome [BR:ngr03011]
|
03009 Ribosome biogenesis [BR:ngr03009]
|
03016 Transfer RNA biogenesis [BR:ngr03016]
|
03012 Translation factors [BR:ngr03012]
|
03110 Chaperones and folding catalysts [BR:ngr03110]
|
04131 Membrane trafficking [BR:ngr04131]
|
04121 Ubiquitin system [BR:ngr04121]
|
03051 Proteasome [BR:ngr03051]
|
03032 DNA replication proteins [BR:ngr03032]
|
03036 Chromosome and associated proteins [BR:ngr03036]
|
03400 DNA repair and recombination proteins [BR:ngr03400]
|
NAEGRDRAFT_63689 hypothetical protein
NAEGRDRAFT_74647 dead box RNA helicase
NAEGRDRAFT_33170 hypothetical protein
NAEGRDRAFT_52318 hypothetical protein
NAEGRDRAFT_63944 hypothetical protein
NAEGRDRAFT_70374 hypothetical protein
NAEGRDRAFT_58770 endonuclease
NAEGRDRAFT_44642 hypothetical protein
NAEGRDRAFT_71662 hypothetical protein
NAEGRDRAFT_59151 hypothetical protein
NAEGRDRAFT_63811 hypothetical protein
NAEGRDRAFT_53490 hypothetical protein
NAEGRDRAFT_66232 hypothetical protein
NAEGRDRAFT_35238 PCNA proliferating cell nuclear antigen
NAEGRDRAFT_44329 hypothetical protein
NAEGRDRAFT_47730 BRCT domain-containing protein
NAEGRDRAFT_62335 hypothetical protein
NAEGRDRAFT_70759 hypothetical protein
NAEGRDRAFT_72319 hypothetical protein
NAEGRDRAFT_62711 hypothetical protein
NAEGRDRAFT_58866 poly(ADP-ribose) synthetase
NAEGRDRAFT_71853 poly(ADP-ribose) polymerase
NAEGRDRAFT_78097 rad23 protein
NAEGRDRAFT_5552 hypothetical protein
NAEGRDRAFT_31512 hypothetical protein
NAEGRDRAFT_82942 damage-specific DNA binding protein 1
NAEGRDRAFT_30559 hypothetical protein
NAEGRDRAFT_51024 RNA polymerase II
NAEGRDRAFT_58671 RNA polymerase II largest subunit
NAEGRDRAFT_59892 DNA-directed RNA polymerase II
NAEGRDRAFT_61034 hypothetical protein
NAEGRDRAFT_64024 hypothetical protein
NAEGRDRAFT_29724 hypothetical protein
NAEGRDRAFT_33993 hypothetical protein
NAEGRDRAFT_74650 hypothetical protein
NAEGRDRAFT_71611 hypothetical protein
NAEGRDRAFT_72143 hypothetical protein
NAEGRDRAFT_88233 hypothetical protein
NAEGRDRAFT_29567 hypothetical protein
NAEGRDRAFT_61926 hypothetical protein
NAEGRDRAFT_82093 DEAD/DEAH box helicase
NAEGRDRAFT_79089 hypothetical protein
NAEGRDRAFT_50960 hypothetical protein
NAEGRDRAFT_29347 hypothetical protein
NAEGRDRAFT_80698 DNA repair helicase UVH6
NAEGRDRAFT_61113 hypothetical protein
NAEGRDRAFT_34964 RNA polymerase II transcription factor TFIIH subunit
NAEGRDRAFT_68603 hypothetical protein
NAEGRDRAFT_68362 hypothetical protein
NAEGRDRAFT_2502 hypothetical protein
NAEGRDRAFT_50931 cyclin box fold domain-containing protein
NAEGRDRAFT_78091 single-stranded DNA-binding replication protein A large subunit
NAEGRDRAFT_81289 hypothetical protein
NAEGRDRAFT_54247 hypothetical protein
NAEGRDRAFT_62722 hypothetical protein
NAEGRDRAFT_62721 hypothetical protein
NAEGRDRAFT_48232 hypothetical protein
NAEGRDRAFT_65978 hypothetical protein
NAEGRDRAFT_31990 hypothetical protein
NAEGRDRAFT_81967 hypothetical protein
NAEGRDRAFT_78770 cullin
NAEGRDRAFT_34984 DNA mismatch repair protein muts
NAEGRDRAFT_78068 DNA mismatch repair protein msh6
NAEGRDRAFT_81389 hypothetical protein
NAEGRDRAFT_66154 replication factor C large subunit
NAEGRDRAFT_68675 hypothetical protein
NAEGRDRAFT_44707 hypothetical protein
NAEGRDRAFT_29498 hypothetical protein
NAEGRDRAFT_29162 hypothetical protein
NAEGRDRAFT_30993 hypothetical protein
NAEGRDRAFT_58924 hypothetical protein
NAEGRDRAFT_69708 hypothetical protein
NAEGRDRAFT_3574 hypothetical protein
NAEGRDRAFT_61854 AM39; hypothetical protein
NAEGRDRAFT_45350 hypothetical protein
NAEGRDRAFT_45247 hypothetical protein
NAEGRDRAFT_59017 Rad52/22 domain-containing protein
NAEGRDRAFT_70927 hypothetical protein
NAEGRDRAFT_32708 hypothetical protein
NAEGRDRAFT_29370 hypothetical protein
NAEGRDRAFT_81118 hypothetical protein
NAEGRDRAFT_55855 hypothetical protein
NAEGRDRAFT_36700 hypothetical protein
NAEGRDRAFT_81298 EVH1 domain-containing protein
NAEGRDRAFT_50227 hypothetical protein
NAEGRDRAFT_79617 hypothetical protein
NAEGRDRAFT_58473 structural maintenance of chromosome 5
NAEGRDRAFT_63029 non-SMC element 1
NAEGRDRAFT_52672 hypothetical protein
NAEGRDRAFT_49519 hypothetical protein
NAEGRDRAFT_78941 hypothetical protein
NAEGRDRAFT_68365 hypothetical protein
NAEGRDRAFT_48155 hypothetical protein
NAEGRDRAFT_78187 hypothetical protein
NAEGRDRAFT_52233 hypothetical protein
NAEGRDRAFT_53887 hypothetical protein
NAEGRDRAFT_83257 hypothetical protein
NAEGRDRAFT_51149 hypothetical protein
NAEGRDRAFT_3410 hypothetical protein
NAEGRDRAFT_74042 hypothetical protein
NAEGRDRAFT_76609 hypothetical protein
NAEGRDRAFT_81256 Ku70/Ku80 beta-barrel domain-containing protein
NAEGRDRAFT_57196 DNA dependent protein kinase catalytic subunit
NAEGRDRAFT_79495 ATP-dependent DNA ligase IV
NAEGRDRAFT_65290 hypothetical protein
NAEGRDRAFT_82802 hypothetical protein
NAEGRDRAFT_64819 hypothetical protein
NAEGRDRAFT_62090 hypothetical protein
NAEGRDRAFT_29885 hypothetical protein
NAEGRDRAFT_81299 hypothetical protein
NAEGRDRAFT_57172 hypothetical protein
NAEGRDRAFT_58243 hypothetical protein
NAEGRDRAFT_75398 AM57; hypothetical protein
NAEGRDRAFT_49758 hypothetical protein
NAEGRDRAFT_35944 hypothetical protein
NAEGRDRAFT_57747 SAPS domain-containing protein
NAEGRDRAFT_64981 hypothetical protein
NAEGRDRAFT_75754 hypothetical protein
NAEGRDRAFT_78056 WD40 repeat domain-containing protein
NAEGRDRAFT_68049 hypothetical protein
NAEGRDRAFT_67675 hypothetical protein
NAEGRDRAFT_81016 ATREV3; DNA binding protein-like protein
NAEGRDRAFT_60667 hypothetical protein
NAEGRDRAFT_36679 hypothetical protein
NAEGRDRAFT_65872 hypothetical protein
NAEGRDRAFT_78033 ubiquitin-conjugating enzyme family protein
NAEGRDRAFT_82996 hypothetical protein
NAEGRDRAFT_51962 SprT domain-containing protein
NAEGRDRAFT_62743 hypothetical protein
NAEGRDRAFT_29264 AM27; hypothetical protein
NAEGRDRAFT_53469 AM38; hypothetical protein
NAEGRDRAFT_47863 hypothetical protein
NAEGRDRAFT_57589 hypothetical protein
NAEGRDRAFT_73437 hypothetical protein
NAEGRDRAFT_31751 hypothetical protein
NAEGRDRAFT_78079 serine/threonine-protein kinase
NAEGRDRAFT_52543 hypothetical protein
NAEGRDRAFT_80121 hypothetical protein
NAEGRDRAFT_79667 14-3-3 protein-like protein
NAEGRDRAFT_34237 hypothetical protein
NAEGRDRAFT_58822 14-3-3 like protein
NAEGRDRAFT_48087 hypothetical protein
NAEGRDRAFT_69957 hypothetical protein
NAEGRDRAFT_44667 hypothetical protein
NAEGRDRAFT_52801 hypothetical protein
NAEGRDRAFT_82205 hypothetical protein
NAEGRDRAFT_30440 hypothetical protein
NAEGRDRAFT_59473 FM162; hypothetical protein
NAEGRDRAFT_31961 hypothetical protein
NAEGRDRAFT_60763 hypothetical protein
NAEGRDRAFT_69090 PRP19/PSO4 pre-mRNA processing factor
NAEGRDRAFT_55455 hypothetical protein
NAEGRDRAFT_50726 hypothetical protein
NAEGRDRAFT_69068 hypothetical protein
NAEGRDRAFT_70971 hypothetical protein
NAEGRDRAFT_71666 hypothetical protein
NAEGRDRAFT_69330 hypothetical protein
NAEGRDRAFT_32493 hypothetical protein
NAEGRDRAFT_56348 hypothetical protein
NAEGRDRAFT_68804 hypothetical protein
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K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10803 XRCC1; DNA-repair protein XRCC1
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10839 RAD23; UV excision repair protein RAD23
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K15083 RAD16; DNA repair protein RAD16
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K10841 ERCC6; DNA excision repair protein ERCC-6
K25829 ELOF1; transcription elongation factor 1
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K03869 CUL3; cullin 3
K03869 CUL3; cullin 3
K08735 MSH2; DNA mismatch repair protein MSH2
K08737 MSH6; DNA mismatch repair protein MSH6
K08734 MLH1; DNA mismatch repair protein MLH1
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10865 MRE11; double-strand break repair protein MRE11
K12173 BRE; BRCA1-A complex subunit BRE
K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
K08775 BRCA2; breast cancer 2 susceptibility protein
K10871 RAD51L3; RAD51-like protein 3
K10873 RAD52; DNA repair and recombination protein RAD52
K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
K17491 SMEK; protein phosphatase 4 regulatory subunit 3
K15426 PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4
K19023 AP5M1; AP-5 complex subunit mu-1
K22803 SMC5; structural maintenance of chromosomes protein 5
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22825 NSMCE4; non-structural maintenance of chromosomes element 4
K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
K19026 SPG11; spatacsin
K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K23456 CFAP410; cilla- and flagella-associated protein
K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
K10892 FANCE; fanconi anemia group E protein
K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
K10895 FANCI; fanconi anemia group I protein
K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
K11137 TELO2; telomere length regulation protein
K15361 WDR48; WD repeat-containing protein 48
K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
K23314 WRAP53; telomerase Cajal body protein 1
K24752 WDR70; WD repeat-containing protein 70
K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K26957 GCNA; germ cell nuclear acidic protein
K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
K10903 HUS1; HUS1 checkpoint protein
K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
K06662 HRAD17; cell cycle checkpoint protein
K20403 TTI1; TELO2-interacting protein 1
K23387 GET4; golgi to ER traffic protein 4
K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
K06630 YWHAE; 14-3-3 protein epsilon
K06630 YWHAE; 14-3-3 protein epsilon
K06630 YWHAE; 14-3-3 protein epsilon
K06630 YWHAE; 14-3-3 protein epsilon
K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K15340 DCLRE1A; DNA cross-link repair 1A protein
K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
K21813 ENDOV; endonuclease V [EC:3.1.26.-]
K21813 ENDOV; endonuclease V [EC:3.1.26.-]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
K12862 PLRG1; pleiotropic regulator 1
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
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03029 Mitochondrial biogenesis [BR:ngr03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Naegleria gruberi