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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:nme03030]
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 NMB1451 dnaQ-1; DNA polymerase III, epsilon subunit
NMB1514 dnaQ-2; DNA polymerase III, epsilon subunit
NMB1827 dnaE; DNA polymerase III, alpha subunit
NMB1443 dnaX; DNA polymerase III, subunits gamma and tau
NMB0769 putative DNA polymerase III, delta prime subunit
NMB0708 holA; DNA polymerase III, delta subunit
NMB1568 putative DNA polymerase holoenzyme chi subunit
NMB1902 dnaN; DNA polymerase III, beta subunit
NMB0885 dnaB; replicative DNA helicase
NMB1537 dnaG; DNA primase
NMB1460 ssb; single-strand binding protein
NMB1618 rnhA; ribonuclease HI
NMB0192 rnhB; ribonuclease HII
NMB1982 polA; DNA polymerase I
NMB0666 ligA-1; DNA ligase
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K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:nme03410]
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NMB0533 nth; endonuclease III
NMB1222 ung; uracil-DNA glycosylase
NMB1396 mutY; A/G-specific adenine glycosylase
NMB1295 mutM; formamidopyrimidine-DNA glycosylase
NMB1673 tag; DNA-3-methyladenine glycosylase I
NMB1873 putative DNA polymerase, bacteriophage-type
NMB2082 exoA; exodeoxyribonuclease
NMB0399 xthA; exodeoxyribonuclease III
NMB1982 polA; DNA polymerase I
NMB0842 recJ; single-stranded-DNA-specific exonuclease RecJ
NMB0666 ligA-1; DNA ligase
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:nme03420]
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NMB1281 mfd; transcription-repair coupling factor
NMB0962 uvrA; excinuclease ABC, subunit A
NMB1331 uvrB; excinuclease ABC, subunit B
NMB1326 uvrC; excinuclease ABC, subunit C
NMB0232 uvrD; DNA helicase II
NMB1982 polA; DNA polymerase I
NMB0666 ligA-1; DNA ligase
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K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03430 Mismatch repair [PATH:nme03430]
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NMB2160 mutS; DNA mismatch repair protein MutS
NMB1442 mutL; mismatch repair protein MutL
NMB0232 uvrD; DNA helicase II
NMB1363 xseA; exodeoxyribonuclease, large subunit
NMB0262 xseB; exodeoxyribonuclease, small subunit
NMB0842 recJ; single-stranded-DNA-specific exonuclease RecJ
NMB1460 ssb; single-strand binding protein
NMB1827 dnaE; DNA polymerase III, alpha subunit
NMB1902 dnaN; DNA polymerase III, beta subunit
NMB1443 dnaX; DNA polymerase III, subunits gamma and tau
NMB0708 holA; DNA polymerase III, delta subunit
NMB0769 putative DNA polymerase III, delta prime subunit
NMB1451 dnaQ-1; DNA polymerase III, epsilon subunit
NMB1514 dnaQ-2; DNA polymerase III, epsilon subunit
NMB1568 putative DNA polymerase holoenzyme chi subunit
NMB0666 ligA-1; DNA ligase
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K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03440 Homologous recombination [PATH:nme03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:nme03000]
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03021 Transcription machinery [BR:nme03021]
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03019 Messenger RNA biogenesis [BR:nme03019]
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03041 Spliceosome
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03011 Ribosome [BR:nme03011]
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03009 Ribosome biogenesis [BR:nme03009]
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03016 Transfer RNA biogenesis [BR:nme03016]
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03012 Translation factors [BR:nme03012]
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03110 Chaperones and folding catalysts [BR:nme03110]
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04131 Membrane trafficking [BR:nme04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:nme03032]
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NMB1618 rnhA; ribonuclease HI
NMB0725 modification methylase HgaI-1
NMB0826 C-5 cytosine-specific DNA methylase
NMB1033 modification methylase NlaIV
NMB1290 C-5 cytosine-specific DNA-methylase
NMB1230 hupB; DNA-binding protein HU-beta
NMB0729 himA; integration host factor, alpha subunit
NMB1302 himD; integration host factor, beta subunit
NMB1903 dnaA; chromosomal replication initiator protein DnaA
NMB0885 dnaB; replicative DNA helicase
NMB1537 dnaG; DNA primase
NMB1460 ssb; single-strand binding protein
NMB1827 dnaE; DNA polymerase III, alpha subunit
NMB1902 dnaN; DNA polymerase III, beta subunit
NMB1568 putative DNA polymerase holoenzyme chi subunit
NMB0708 holA; DNA polymerase III, delta subunit
NMB0769 putative DNA polymerase III, delta prime subunit
NMB1451 dnaQ-1; DNA polymerase III, epsilon subunit
NMB1514 dnaQ-2; DNA polymerase III, epsilon subunit
NMB1443 dnaX; DNA polymerase III, subunits gamma and tau
NMB0192 rnhB; ribonuclease HII
NMB1982 polA; DNA polymerase I
NMB0666 ligA-1; DNA ligase
NMB1076 DnaA-related protein
NMB1384 gyrA; DNA gyrase subunit A
NMB0212 gyrB; DNA gyrase subunit B
NMB1605 parC; topoisomerase IV subunit A
NMB1682 parE; topoisomerase IV subunit B
NMB0118 topA; DNA topoisomerase I
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:nme03036]
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03400 DNA repair and recombination proteins [BR:nme03400]
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NMB1528 putative methylated-DNA--protein-cysteine methyltransferase
NMB1222 ung; uracil-DNA glycosylase
NMB1396 mutY; A/G-specific adenine glycosylase
NMB0533 nth; endonuclease III
NMB0453 mutT; mutT protein
NMB0893 dut; deoxyuridine 5`-triphosphate nucleotidohydrolase
NMB1873 putative DNA polymerase, bacteriophage-type
NMB1673 tag; DNA-3-methyladenine glycosylase I
NMB1295 mutM; formamidopyrimidine-DNA glycosylase
NMB2082 exoA; exodeoxyribonuclease
NMB0399 xthA; exodeoxyribonuclease III
NMB0842 recJ; single-stranded-DNA-specific exonuclease RecJ
NMB0666 ligA-1; DNA ligase
NMB1982 polA; DNA polymerase I
NMB0962 uvrA; excinuclease ABC, subunit A
NMB1331 uvrB; excinuclease ABC, subunit B
NMB1326 uvrC; excinuclease ABC, subunit C
NMB0232 uvrD; DNA helicase II
NMB0132 rpoB; DNA-directed RNA polymerase, beta subunit
NMB0133 rpoC; DNA-directed RNA polymerase, beta' subunit
NMB0168 rpoA; DNA-directed RNA polymerase, alpha subunit
NMB1660 rpoZ; DNA-directed RNA polymerase, omega subunit
NMB1281 mfd; transcription-repair coupling factor
NMB2160 mutS; DNA mismatch repair protein MutS
NMB1442 mutL; mismatch repair protein MutL
NMB1363 xseA; exodeoxyribonuclease, large subunit
NMB0262 xseB; exodeoxyribonuclease, small subunit
NMB1827 dnaE; DNA polymerase III, alpha subunit
NMB1902 dnaN; DNA polymerase III, beta subunit
NMB1568 putative DNA polymerase holoenzyme chi subunit
NMB0708 holA; DNA polymerase III, delta subunit
NMB0769 putative DNA polymerase III, delta prime subunit
NMB1451 dnaQ-1; DNA polymerase III, epsilon subunit
NMB1514 dnaQ-2; DNA polymerase III, epsilon subunit
NMB1443 dnaX; DNA polymerase III, subunits gamma and tau
NMB1460 ssb; single-strand binding protein
NMB0785 recB; exodeoxyribonuclease V 135 KD polypeptide
NMB1720 recC; exodeoxyribonuclease V 125 kD polypeptide
NMB1233 recD; exodeoxyribonuclease V, alpha subunit
NMB1445 recA; recA protein
NMB0265 ruvA; Holliday junction DNA helicase RuvA
NMB1243 ruvB; Holliday junction DNA helicase RuvB
NMB1419 ruvC; crossover junction endodeoxyribonuclease RuvC
NMB0551 priA; primosomal protein n`
NMB1322 putative primosomal replication protein n
NMB0782 radA; DNA repair protein RadA
NMB1788 recG; ATP-dependent DNA helicase RecG
NMB0447 recO; DNA repair protein RecO
NMB1237 recR; recombination protein RecR
NMB0740 recN; DNA repair protein RecN
NMB0851 rdgC; recombination associated protein RdgC
NMB1384 gyrA; DNA gyrase subunit A
NMB0212 gyrB; DNA gyrase subunit B
NMB0118 topA; DNA topoisomerase I
NMB1230 hupB; DNA-binding protein HU-beta
NMB1420 putative factor-for-inversion stimulation protein Fis
NMB0729 himA; integration host factor, alpha subunit
NMB1302 himD; integration host factor, beta subunit
NMB0274 recQ; ATP-dependent DNA helicase RecQ
NMB1448 dinP; DNA-damage-inducible protein P
NMB1479 recX; regulatory protein RecX
NMB1447 rep; ATP-dependent DNA helicase
NMB0287 dinG; probable ATP-dependent helicase DinG
NMB1291 nrdA; ribonucleoside-diphosphate reductase, alpha subunit
NMB1288 nrdB; ribonucleoside-diphosphate reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:nme03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Neisseria meningitidis MC58 (serogroup B)