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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:nri03030]
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03410 Base excision repair [PATH:nri03410]
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03420 Nucleotide excision repair [PATH:nri03420]
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03430 Mismatch repair [PATH:nri03430]
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03440 Homologous recombination [PATH:nri03440]
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 NRI_0690 recJ; single-stranded-DNA-specific exonuclease RecJ
NRI_0731 single-strand binding protein
NRI_0193 putative DNA replication and repair protein RecF
NRI_0434 recO; DNA repair protein RecO
NRI_0866 recR; recombination protein RecR
NRI_0507 recA; protein RecA
NRI_0550 holliday junction DNA helicase RuvA
NRI_0552 ruvB; holliday junction DNA helicase RuvB
NRI_0912 crossover junction endodeoxyribonuclease RuvC
NRI_0667 ATP-dependent DNA helicase RecG
NRI_0163 DNA polymerase III subunit alpha
NRI_0166 dnaN; DNA polymerase III, beta subunit
NRI_0465 dnaX; DNA polymerase III, subunits gamma and tau
NRI_0361 conserved hypothetical protein
NRI_0445 dnaQ; DNA polymerase III, epsilon subunit
NRI_0199 priA; primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:nri03000]
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03021 Transcription machinery [BR:nri03021]
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03019 Messenger RNA biogenesis [BR:nri03019]
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03041 Spliceosome
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03011 Ribosome [BR:nri03011]
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03009 Ribosome biogenesis [BR:nri03009]
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03016 Transfer RNA biogenesis [BR:nri03016]
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03012 Translation factors [BR:nri03012]
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03110 Chaperones and folding catalysts [BR:nri03110]
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04131 Membrane trafficking [BR:nri04131]
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04121 Ubiquitin system [BR:nri04121]
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03051 Proteasome [BR:nri03051]
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03032 DNA replication proteins [BR:nri03032]
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03036 Chromosome and associated proteins [BR:nri03036]
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03400 DNA repair and recombination proteins [BR:nri03400]
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NRI_0805 phrB; deoxyribodipyrimidine photolyase
NRI_0237 nth; endonuclease III
NRI_0915 dut; deoxyuridine 5triphosphate nucleotidohydrolase
NRI_0895 uracil-DNA glycosylase, family 4
NRI_0394 xth; exodeoxyribonuclease III
NRI_0690 recJ; single-stranded-DNA-specific exonuclease RecJ
NRI_0473 ligA; DNA ligase, NAD-dependent
NRI_0343 DNA helicase II, UvrD/Rep family, N-terminal fragment
NRI_0344 DNA helicase II, UvrD/Rep family, C-terminal fragment
NRI_0655 rpoB; DNA-directed RNA polymerase, beta subunit
NRI_0653 bifunctional DNA-directed RNA polymerase, beta and beta' chain
NRI_0654 DNA-directed RNA polymerase beta' chain
NRI_0280 rpoA; DNA-directed RNA polymerase, alpha subunit
NRI_0328 mutS; DNA mismatch repair protein MutS
NRI_0581 DNA mismatch repair protein, MutL/HexB family
NRI_0163 DNA polymerase III subunit alpha
NRI_0166 dnaN; DNA polymerase III, beta subunit
NRI_0361 conserved hypothetical protein
NRI_0445 dnaQ; DNA polymerase III, epsilon subunit
NRI_0465 dnaX; DNA polymerase III, subunits gamma and tau
NRI_0731 single-strand binding protein
NRI_0507 recA; protein RecA
NRI_0550 holliday junction DNA helicase RuvA
NRI_0552 ruvB; holliday junction DNA helicase RuvB
NRI_0912 crossover junction endodeoxyribonuclease RuvC
NRI_0199 priA; primosomal protein N'
NRI_0193 putative DNA replication and repair protein RecF
NRI_0667 ATP-dependent DNA helicase RecG
NRI_0434 recO; DNA repair protein RecO
NRI_0866 recR; recombination protein RecR
NRI_0442 ATP-dependent DNA helicase, UvrD/REP family
NRI_0499 conserved hypothetical protein
NRI_0917 gyrA; DNA gyrase, A subunit
NRI_0698 gyrB; DNA gyrase, B subunit
NRI_0570 topA; DNA topoisomerase I
NRI_0612 DNA-binding protein HU
NRI_0390 ribonucleoside-diphosphate reductase, alpha subunit
NRI_0495 ribonucleoside-diphosphate reductase, beta subunit
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:nri03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Neorickettsia risticii