Messenger RNA Biogenesis - Puccinia graminis

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
       EJC complex
       TREX complex
       TREX-2 complex
       Nuclear pore complex
       Ran-mediated transport factors
       eIF4F and regulatory proteins
         PGTG_15366 translation initiation factor eIF-4E
         PGTG_16535 translation initiation factor eIF-4E
         PGTG_08424 hypothetical protein
         PGTG_06597 ATP-dependent RNA helicase eIF4A
         PGTG_18715 hypothetical protein
         PGTG_18726 hypothetical protein
         PGTG_17244 hypothetical protein
         PGTG_11016 hypothetical protein
         PGTG_05977 hypothetical protein
         PGTG_10266 hypothetical protein
         PGTG_15382 hypothetical protein
         PGTG_13804 hypothetical protein
         PGTG_06528 hypothetical protein
         PGTG_06529 hypothetical protein
         PGTG_07821 hypothetical protein
         PGTG_19437 hypothetical protein
         PGTG_10495 hypothetical protein
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03257 EIF4A; translation initiation factor 4A 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03258 EIF4B; translation initiation factor 4B 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K12599 SKI2; antiviral helicase SKI2 [EC:3.6.4.13] 
K07575 MCTS; malignant T-cell-amplified sequence 
K24272 DENR; density-regulated protein 
       APOBEC1-ACF complex
       Other transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
         PGTG_05555 hypothetical protein
         PGTG_11327 hypothetical protein
         PGTG_09581 hypothetical protein
         PGTG_08429 hypothetical protein
         PGTG_15366 translation initiation factor eIF-4E
         PGTG_16535 translation initiation factor eIF-4E
         PGTG_08424 hypothetical protein
         PGTG_17974 hypothetical protein
         PGTG_11016 hypothetical protein
         PGTG_02128 hypothetical protein
         PGTG_10898 hypothetical protein
         PGTG_05807 hypothetical protein
         PGTG_01034 serine/threonine protein kinase
         PGTG_17146 AGC/PKA protein kinase
K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K14326 UPF1; regulator of nonsense transcripts 1 [EC:3.6.4.13 5.6.2.3] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 
K18749 LSM14; protein LSM14 
K18752 TNPO1; transportin-1 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
       P-body specific factors
       Stress granule specific factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 9, 2024