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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:psi03030]
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03410 Base excision repair [PATH:psi03410]
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03420 Nucleotide excision repair [PATH:psi03420]
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03430 Mismatch repair [PATH:psi03430]
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03440 Homologous recombination [PATH:psi03440]
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 S70_03550 ssDNA exonuclease RecJ
S70_07910 single-stranded DNA-binding protein
S70_16700 ssDNA-binding protein controls activity of RecBCD nuclease
S70_10490 gap repair protein
S70_03120 DNA repair protein
S70_04935 recR; recombination protein RecR
S70_05860 recombinase A
S70_08865 DNA polymerase I
S70_20255 ruvA; Holliday junction DNA helicase RuvA
S70_20260 ruvB; Holliday junction DNA helicase RuvB
S70_20250 ruvC; Holliday junction resolvase
S70_09040 ATP-dependent DNA helicase RecG
S70_09045 ATP-dependent DNA helicase RecG
S70_14895 recB; exonuclease V subunit beta
S70_14885 recC; exonuclease V subunit gamma
S70_14900 recD; exonuclease V subunit alpha
S70_15095 dnaE; DNA polymerase III subunit alpha
S70_10500 DNA polymerase III subunit beta
S70_04945 DNA polymerase III subunits tau/gamma
S70_15375 holA; DNA polymerase III subunit delta
S70_01630 DNA polymerase III subunit delta'
S70_04155 exonuclease
S70_06670 DNA polymerase III subunit epsilon
S70_00875 DNA polymerase III subunit theta
S70_12455 DNA polymerase III subunit chi
S70_07495 DNA polymerase III subunit psi
S70_11175 primosome assembly protein PriA
S70_11950 primosomal replication protein N
S70_04955 primosomal replication factor N''
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:psi03000]
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03021 Transcription machinery [BR:psi03021]
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03019 Messenger RNA biogenesis [BR:psi03019]
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03041 Spliceosome
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03011 Ribosome [BR:psi03011]
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03009 Ribosome biogenesis [BR:psi03009]
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03016 Transfer RNA biogenesis [BR:psi03016]
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03012 Translation factors [BR:psi03012]
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03110 Chaperones and folding catalysts [BR:psi03110]
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04131 Membrane trafficking [BR:psi04131]
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04121 Ubiquitin system [BR:psi04121]
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03051 Proteasome [BR:psi03051]
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03032 DNA replication proteins [BR:psi03032]
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03036 Chromosome and associated proteins [BR:psi03036]
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03400 DNA repair and recombination proteins [BR:psi03400]
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S70_15310 methylated-DNA-[protein]-cysteine S-methyltransferase
S70_09320 deoxyribodipyrimidine photolyase
S70_03205 uracil-DNA glycosylase
S70_06105 adenine DNA glycosylase
S70_00395 endonuclease III
S70_03815 nucleoside triphosphate pyrophosphohydrolase
S70_20765 hypothetical protein
S70_01800 hypothetical protein
S70_15435 NUDIX family hydrolase
S70_20220 hypothetical protein
S70_10740 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
S70_20885 bifunctional transcriptional regulator of DNA repair (AraC/Xyl family)/O6-methylguanine-DNA methyltransferase
S70_20995 alpha-ketoglutarate-dependent dioxygenase AlkB
S70_09305 hypothetical protein
S70_08980 DNA-3-methyladenine glycosylase I (3-methyladenine-DNA glycosylase I, constitutive) (TAG I) (DNA-3-methyladenine glycosidase I)
S70_10815 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
S70_00695 exonuclease III
S70_01790 endonuclease IV
S70_08510 endonuclease V
S70_03550 ssDNA exonuclease RecJ
S70_02810 ligA; NAD-dependent DNA ligase LigA
S70_09015 ligB; NAD-dependent DNA ligase LigB
S70_08865 DNA polymerase I
S70_07915 uvrA; excinuclease ABC subunit A
S70_15945 excinuclease ABC subunit B
S70_18650 uvrC; excinuclease ABC subunit C
S70_11770 uvrD; DNA-dependent helicase II
S70_08605 rpoB; DNA-directed RNA polymerase subunit beta
S70_08600 DNA-directed RNA polymerase subunit beta'
S70_11475 DNA-directed RNA polymerase subunit alpha
S70_09025 rpoZ; DNA-directed RNA polymerase subunit omega
S70_01550 transcription-repair coupling factor
S70_05590 DNA mismatch repair protein MutS
S70_11890 methyl-directed mismatch repair protein
S70_03965 DNA mismatch repair protein
S70_01735 sbcB; exonuclease I
S70_01045 xseA; exodeoxyribonuclease VII large subunit
S70_06855 exodeoxyribonuclease VII small subunit
S70_15095 dnaE; DNA polymerase III subunit alpha
S70_10500 DNA polymerase III subunit beta
S70_12455 DNA polymerase III subunit chi
S70_15375 holA; DNA polymerase III subunit delta
S70_01630 DNA polymerase III subunit delta'
S70_04155 exonuclease
S70_06670 DNA polymerase III subunit epsilon
S70_04945 DNA polymerase III subunits tau/gamma
S70_07495 DNA polymerase III subunit psi
S70_00875 DNA polymerase III subunit theta
S70_07910 single-stranded DNA-binding protein
S70_16700 ssDNA-binding protein controls activity of RecBCD nuclease
S70_10095 DNA adenine methylase
S70_18750 D12 class N6 adenine-specific DNA methyltransferase
S70_14895 recB; exonuclease V subunit beta
S70_14885 recC; exonuclease V subunit gamma
S70_14900 recD; exonuclease V subunit alpha
S70_05860 recombinase A
S70_20255 ruvA; Holliday junction DNA helicase RuvA
S70_20260 ruvB; Holliday junction DNA helicase RuvB
S70_20250 ruvC; Holliday junction resolvase
S70_16855 phage endonuclease
S70_11175 primosome assembly protein PriA
S70_11950 primosomal replication protein N
S70_04955 primosomal replication factor N''
S70_06965 nuclease sbccd subunit c
S70_06960 exonuclease subunit SbcD
S70_07355 DNA repair protein RadA
S70_10490 gap repair protein
S70_09040 ATP-dependent DNA helicase RecG
S70_09045 ATP-dependent DNA helicase RecG
S70_03120 DNA repair protein
S70_04935 recR; recombination protein RecR
S70_03220 recombination and repair protein
S70_07015 rdgC; recombination associated protein
S70_16800 ribonuclease
S70_18290 CRISPR-associated protein Cas1
S70_01845 ATP-dependent helicase with nucleoside triP hydrolase domain
S70_02255 DNA gyrase subunit A
S70_10485 gyrB; DNA gyrase subunit B
S70_00470 DNA topoisomerase I subunit omega
S70_08500 DNA binding protein hu-alpha
S70_06760 DNA-binding protein HU-beta
S70_13895 fis; global DNA-binding transcriptional dual regulator Fis
S70_19335 ihfA; integration host factor subunit alpha
S70_17130 ihfB; integration host factor subunit beta
S70_11820 ATP-dependent DNA helicase RecQ
S70_07905 ATP-dependent DNA helicase, RecQ family protein
S70_00660 global DNA-binding transcriptional dual regulator H-NS
S70_05920 DNA polymerase IV
S70_08375 LexA repressor
S70_14820 DNA polymerase II
S70_04440 UV protection and mutation protein
S70_01905 hypothetical protein
S70_18260 hypothetical protein
S70_08220 regulatory protein
S70_11615 ATP-dependent DNA helicase Rep
S70_17330 helD; DNA helicase IV
S70_20365 hypothetical protein
S70_16030 dinG; ATP-dependent DNA helicase DinG
S70_15295 ribonucleotide-diphosphate reductase subunit alpha
S70_02265 ribonucleotide-diphosphate reductase subunit alpha
S70_02270 nrdB; ribonucleotide-diphosphate reductase subunit beta
S70_15290 ribonucleotide-diphosphate reductase subunit beta
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K19789 radD; DNA repair protein RadD
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:psi03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Providencia stuartii MRSN 2154