DNA Repair and Recombination Proteins - Stutzerimonas stutzeri DSM 4166

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
       RecBC pathway proteins
         PSTAA_3554 recB-1; exodeoxyribonuclease V beta chain
         PSTAA_4184 recB-2; exodeoxyribonuclease V, beta subunit
         PSTAA_3555 recC-1; exodeoxyribonuclease V gamma chain
         PSTAA_4185 recC-2; exodeoxyribonuclease V gamma chain
         PSTAA_3553 recD-1; exodeoxyribonuclease V alpha chain
         PSTAA_4183 recD-2; exodeoxyribonuclease V alpha chain
         PSTAA_1531 recA; recombinase A
         PSTAA_2932 ruvA; Holliday junction DNA helicase RuvA
         PSTAA_2931 ruvB; Holliday junction DNA helicase RuvB
         PSTAA_2933 ruvC; Holliday junction resolvase
         PSTAA_0603 priA; primosome assembly protein PriA
         PSTAA_1122 sbcB; exonuclease I
         PSTAA_0787 sbcC; exonuclease SbcC
         PSTAA_0788 sbcD; exonuclease SbcD
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] 
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] 
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] 
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] 
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03553 recA; recombination protein RecA 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] 
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
K03546 sbcC; DNA repair protein SbcC/Rad50 
K03547 sbcD; DNA repair protein SbcD/Mre11 
       RecFOR pathway proteins
         PSTAA_1531 recA; recombinase A
         PSTAA_0905 radA; DNA repair protein RadA
         PSTAA_0003 recF; recombination protein F
         PSTAA_0157 recG; ATP-dependent DNA helicase RecG
         PSTAA_2881 recJ; single-stranded-DNA-specific exonuclease RecJ
         PSTAA_1196 recO; DNA repair protein RecO
         PSTAA_1849 recR; recombination protein RecR
         PSTAA_3492 recN; DNA repair protein RecN
         PSTAA_2895 rdgC; recombination associated protein
         PSTAA_2932 ruvA; Holliday junction DNA helicase RuvA
         PSTAA_2931 ruvB; Holliday junction DNA helicase RuvB
         PSTAA_2933 ruvC; Holliday junction resolvase
K03553 recA; recombination protein RecA 
K04485 radA; DNA repair protein RadA/Sms 
K03629 recF; DNA replication and repair protein RecF 
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] 
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
K03584 recO; DNA repair protein RecO (recombination protein O) 
K06187 recR; recombination protein RecR 
K03631 recN; DNA repair protein RecN (Recombination protein N) 
K03554 rdgC; recombination associated protein RdgC 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
       AddAB pathway proteins
       Other HR factor
       Archaeal homologous recombinant proteins
     NHEJ (non-homologous end-joining)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024