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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:pub03030]
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03410 Base excision repair [PATH:pub03410]
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03420 Nucleotide excision repair [PATH:pub03420]
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03430 Mismatch repair [PATH:pub03430]
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03440 Homologous recombination [PATH:pub03440]
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 SAR11_1010 recJ; single-stranded-DNA-specific exonuclease RecJ
SAR11_0984 ssb; single-strand binding protein (ssb)
SAR11_1052 recO; Recombination protein O
SAR11_0509 recR; recR-like protein
SAR11_0641 recA; recA protein
SAR11_0200 polA; DNA polymerase I
SAR11_0993 recG; ATP-dependent DNA helicase recG
SAR11_0906 dnaE; DNA polymerase III alpha subunit
SAR11_0411 dnaN; DNA polymerase III
SAR11_0507 dnaX; DNA-directed DNA polymerase gamma/tau subunit
SAR11_0355 holA; DNA-directed DNA polymerase III
SAR11_1000 holB; probable DNA polymerase III
SAR11_0339 dnaQ; DNA polymerase III
SAR11_0234 priA; probable primosomal protein N
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:pub03000]
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03021 Transcription machinery [BR:pub03021]
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03019 Messenger RNA biogenesis [BR:pub03019]
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03041 Spliceosome
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03011 Ribosome [BR:pub03011]
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03009 Ribosome biogenesis [BR:pub03009]
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03016 Transfer RNA biogenesis [BR:pub03016]
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03012 Translation factors [BR:pub03012]
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03110 Chaperones and folding catalysts [BR:pub03110]
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04131 Membrane trafficking [BR:pub04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:pub03032]
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03036 Chromosome and associated proteins [BR:pub03036]
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03400 DNA repair and recombination proteins [BR:pub03400]
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SAR11_1021 ada; 6-O-methylguanine DNA methyltransferase
SAR11_1318 phrB; Deoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme)
SAR11_0298 DNA photolyase-like protein
SAR11_0111 mutY; A/G-specific adenine glycosylase
SAR11_0365 nth; probable endonuclease III
SAR11_0404 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase
SAR11_0303 deoxyribodipyrimidine photolyase-related protein
SAR11_0873 ung; uracil-DNA glycosylase
SAR11_0107 probable DNA-directed DNA polymerase
SAR11_0186 tag; DNA-3-methyladenine glycosylase I
SAR11_0408 mutM; Formamidopyrimidine-DNA glycosylase
SAR11_0967 xthA; exodeoxyribonuclease III
SAR11_1010 recJ; single-stranded-DNA-specific exonuclease RecJ
SAR11_0016 ligA; DNA ligase
SAR11_0200 polA; DNA polymerase I
SAR11_0983 uvrA; excinuclease ABC chain A
SAR11_0081 uvrB; excinuclease ABC chain B
SAR11_0084 uvrC; excinuclease ABC chain C
SAR11_0014 uvrD; DNA helicase II
SAR11_1123 rpoB; DNA-directed RNA polymerase
SAR11_1122 rpoC; DNA-directed RNA polymerase beta prime chain
SAR11_1093 rpoA; DNA-directed RNA polymerase
SAR11_1194 rpoZ; DNA-directed RNA polymerase omega chain (RNAP omega subunit)
SAR11_0483 sbcB; Exodeoxyribonuclease I
SAR11_0906 dnaE; DNA polymerase III alpha subunit
SAR11_0411 dnaN; DNA polymerase III
SAR11_0355 holA; DNA-directed DNA polymerase III
SAR11_1000 holB; probable DNA polymerase III
SAR11_0339 dnaQ; DNA polymerase III
SAR11_0507 dnaX; DNA-directed DNA polymerase gamma/tau subunit
SAR11_0984 ssb; single-strand binding protein (ssb)
SAR11_0641 recA; recA protein
SAR11_0234 priA; probable primosomal protein N
SAR11_0993 recG; ATP-dependent DNA helicase recG
SAR11_1052 recO; Recombination protein O
SAR11_0509 recR; recR-like protein
SAR11_0985 gyrA; DNA gyrase subunit A
SAR11_0446 gyrB; DNA topoisomerase (ATP-hydrolyzing) chain B (DNA gyrase B)
SAR11_1083 topA; DNA topoisomerase I
SAR11_0817 hupA; non-specific DNA-binding protein HBsu
SAR11_1035 himA; Bacterial DNA-binding protein
SAR11_0491 himD; Integration host factor beta-subunit (IHF-beta)
SAR11_0634 umuC; umuC
SAR11_0635 mucA; hypothetical protein
SAR11_0921 lexA; repressor LexA
SAR11_0824 recX; Regulatory protein
SAR11_1159 nrdA; ribonucleoside-diphosphate reductase alpha chain
SAR11_0723 nrdE; ribonucleotide reductase alpha subunit
SAR11_1158 nrdB; ribonucleoside-diphosphate reductase beta chain
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:pub03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Candidatus Pelagibacter ubique