| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:rsw03030]
|
03410 Base excision repair [PATH:rsw03410]
|
03420 Nucleotide excision repair [PATH:rsw03420]
|
03430 Mismatch repair [PATH:rsw03430]
|
03440 Homologous recombination [PATH:rsw03440]
|
 MC3_03920 single-stranded-DNA-specific exonuclease RecJ
MC3_07190 single-stranded DNA-binding protein
MC3_00225 recF; recombination protein F
MC3_04525 recO; DNA repair protein RecO
MC3_03435 recR; recombination protein RecR
MC3_06585 recA; recombinase A
MC3_03030 ruvA; Holliday junction DNA helicase RuvA
MC3_03040 ruvB; Holliday junction DNA helicase RuvB
MC3_00925 ruvC; Holliday junction resolvase
MC3_05030 ATP-dependent DNA helicase RecG
MC3_06720 dnaE; DNA polymerase III subunit alpha
MC3_03280 DNA polymerase III subunit beta
MC3_07390 DNA polymerase III subunits gamma and tau
MC3_01385 holA; DNA polymerase III subunit delta
MC3_01230 DNA polymerase III subunit delta'
MC3_06250 DNA polymerase III subunit epsilon
MC3_07475 DNA polymerase III subunit chi
MC3_04455 primosome assembly protein PriA
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:rsw03000]
|
03021 Transcription machinery [BR:rsw03021]
|
03019 Messenger RNA biogenesis [BR:rsw03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:rsw03011]
|
03009 Ribosome biogenesis [BR:rsw03009]
|
03016 Transfer RNA biogenesis [BR:rsw03016]
|
03012 Translation factors [BR:rsw03012]
|
03110 Chaperones and folding catalysts [BR:rsw03110]
|
04131 Membrane trafficking [BR:rsw04131]
|
04121 Ubiquitin system
|
03051 Proteasome [BR:rsw03051]
|
03032 DNA replication proteins [BR:rsw03032]
|
03036 Chromosome and associated proteins [BR:rsw03036]
|
03400 DNA repair and recombination proteins [BR:rsw03400]
|
MC3_04845 methylated-DNA--protein-cysteine methyltransferase
MC3_04860 Methylated-DNA--protein-cysteine methyltransferase
MC3_02730 3-methyladenine DNA glycosylase
MC3_06440 endonuclease III
MC3_03000 ADP-ribose pyrophosphatase MutT
MC3_03105 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
MC3_07260 uracil-DNA glycosylase
MC3_05800 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
MC3_05735 exodeoxyribonuclease III
MC3_01980 exodeoxyribonuclease III
MC3_03920 single-stranded-DNA-specific exonuclease RecJ
MC3_06170 ligA; NAD-dependent DNA ligase LigA
MC3_07185 uvrA; excinuclease ABC subunit A
MC3_01515 excinuclease ABC subunit B
MC3_04825 uvrC; excinuclease ABC subunit C
MC3_03515 DNA helicase II
MC3_01045 rpoB; DNA-directed RNA polymerase subunit beta
MC3_01050 DNA-directed RNA polymerase subunit beta'
MC3_05485 DNA-directed RNA polymerase subunit alpha
MC3_04940 rpoZ; DNA-directed RNA polymerase subunit omega
MC3_05085 transcription-repair coupling factor
MC3_02300 DNA mismatch repair protein MutS
MC3_07565 mutL; DNA mismatch repair protein
MC3_05715 xseA; exodeoxyribonuclease VII large subunit
MC3_02710 exodeoxyribonuclease VII small subunit
MC3_06720 dnaE; DNA polymerase III subunit alpha
MC3_03280 DNA polymerase III subunit beta
MC3_07475 DNA polymerase III subunit chi
MC3_01385 holA; DNA polymerase III subunit delta
MC3_01230 DNA polymerase III subunit delta'
MC3_06250 DNA polymerase III subunit epsilon
MC3_07390 DNA polymerase III subunits gamma and tau
MC3_07190 single-stranded DNA-binding protein
MC3_04315 DNA adenine methyltransferase (MboA)
MC3_06585 recA; recombinase A
MC3_03030 ruvA; Holliday junction DNA helicase RuvA
MC3_03040 ruvB; Holliday junction DNA helicase RuvB
MC3_00925 ruvC; Holliday junction resolvase
MC3_04455 primosome assembly protein PriA
MC3_04515 DNA repair protein RadA
MC3_00225 recF; recombination protein F
MC3_05030 ATP-dependent DNA helicase RecG
MC3_04525 recO; DNA repair protein RecO
MC3_03435 recR; recombination protein RecR
MC3_01335 DNA repair protein RecN
MC3_06260 ATP-dependent helicase
MC3_03125 hypothetical protein
MC3_01550 DNA gyrase subunit A
MC3_04950 gyrB; DNA gyrase subunit B
MC3_02555 DNA topoisomerase I
MC3_01225 DNA-binding protein HU
MC3_06005 Integration host factor alpha-subunit
MC3_03940 Integration host factor beta-subunit
MC3_03650 ribonucleotide-diphosphate reductase subunit alpha
MC3_03670 nrdF; ribonucleotide-diphosphate reductase subunit beta
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
|
03029 Mitochondrial biogenesis [BR:rsw03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Rickettsia slovaca D-CWPP