| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:saj03030]
|
03410 Base excision repair [PATH:saj03410]
|
 SaurJH9_1511 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
SaurJH9_0604 Uracil-DNA glycosylase
SaurJH9_1922 A/G-specific DNA-adenine glycosylase
SaurJH9_2368 DNA-3-methyladenine glycosylase
SaurJH9_1746 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase
SaurJH9_1722 DNA-3-methyladenine glycosylase I
SaurJH9_1615 Endonuclease IV
SaurJH9_1747 DNA polymerase I
SaurJH9_1693 exonuclease RecJ
SaurJH9_1959 DNA ligase, NAD-dependent
|
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
03420 Nucleotide excision repair [PATH:saj03420]
|
03430 Mismatch repair [PATH:saj03430]
|
03440 Homologous recombination [PATH:saj03440]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:saj03000]
|
03021 Transcription machinery [BR:saj03021]
|
03019 Messenger RNA biogenesis [BR:saj03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:saj03011]
|
03009 Ribosome biogenesis [BR:saj03009]
|
03016 Transfer RNA biogenesis [BR:saj03016]
|
03012 Translation factors [BR:saj03012]
|
03110 Chaperones and folding catalysts [BR:saj03110]
|
04131 Membrane trafficking [BR:saj04131]
|
04121 Ubiquitin system [BR:saj04121]
|
03051 Proteasome
|
03032 DNA replication proteins [BR:saj03032]
|
03036 Chromosome and associated proteins [BR:saj03036]
|
03400 DNA repair and recombination proteins [BR:saj03400]
|
SaurJH9_2570 methylated-DNA--protein-cysteine methyltransferase
SaurJH9_0715 Deoxyribodipyrimidine photo-lyase type I
SaurJH9_0604 Uracil-DNA glycosylase
SaurJH9_2368 DNA-3-methyladenine glycosylase
SaurJH9_1922 A/G-specific DNA-adenine glycosylase
SaurJH9_1511 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
SaurJH9_2516 NUDIX hydrolase
SaurJH9_1844 8-oxo-dGTPase
SaurJH9_0879 deoxyuridine 5'-triphosphate nucleotidohydrolase
SaurJH9_1722 DNA-3-methyladenine glycosylase I
SaurJH9_1746 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase
SaurJH9_1615 Endonuclease IV
SaurJH9_1693 exonuclease RecJ
SaurJH9_1959 DNA ligase, NAD-dependent
SaurJH9_1747 DNA polymerase I
SaurJH9_0783 Excinuclease ABC subunit A
SaurJH9_0782 Excinuclease ABC subunit B
SaurJH9_1205 Excinuclease ABC subunit C
SaurJH9_1960 ATP-dependent DNA helicase PcrA
SaurJH9_0565 DNA-directed RNA polymerase, beta subunit
SaurJH9_0566 DNA-directed RNA polymerase, beta' subunit
SaurJH9_2251 DNA-directed RNA polymerase, alpha subunit
SaurJH9_2164 DNA-directed RNA polymerase delta subunit
SaurJH9_1269 DNA-directed RNA polymerase, omega subunit
SaurJH9_0525 transcription-repair coupling factor
SaurJH9_1355 DNA mismatch repair protein MutS
SaurJH9_1203 MutS2 family protein
SaurJH9_1582 Exodeoxyribonuclease VII large subunit
SaurJH9_1581 Exodeoxyribonuclease VII small subunit
SaurJH9_1759 DNA polymerase III catalytic subunit, DnaE type
SaurJH9_1324 DNA polymerase III catalytic subunit, PolC type
SaurJH9_0002 DNA polymerase III, beta subunit
SaurJH9_1644 DNA polymerase III, delta subunit
SaurJH9_0505 DNA-directed DNA polymerase
SaurJH9_1948 Exonuclease, RNase T and DNA polymerase III
SaurJH9_0499 DNA polymerase III, tau subunit
SaurJH9_0322 single-strand binding protein
SaurJH9_0414 single-strand binding protein
SaurJH9_0864 single-strand binding protein
SaurJH9_2039 single-strand binding protein
SaurJH9_2133 single-strand binding protein
SaurJH9_1676 ATP-dependent DNA helicase, RecD/TraA family
SaurJH9_1345 RecA protein
SaurJH9_1699 Holliday junction DNA helicase subunit RuvA
SaurJH9_1698 Holliday junction DNA helicase subunit RuvB
SaurJH9_1271 replication restart DNA helicase PriA
SaurJH9_1408 ATPase involved in DNA repair-like protein
SaurJH9_1407 nuclease SbcCD, D subunit
SaurJH9_0548 DNA repair protein RadA
SaurJH9_0004 DNA replication and repair protein RecF
SaurJH9_1286 ATP-dependent DNA helicase RecG
SaurJH9_1624 DNA replication and repair protein RecO
SaurJH9_0501 DNA replication and repair protein RecR
SaurJH9_1578 DNA repair protein RecN
SaurJH9_1508 recombination protein U
SaurJH9_0967 DNA helicase/exodeoxyribonuclease V, subunit A
SaurJH9_0966 DNA helicase/exodeoxyribonuclease V, subunit B
SaurJH9_0006 DNA gyrase subunit A
SaurJH9_0005 DNA gyrase subunit B
SaurJH9_1310 DNA topoisomerase I
SaurJH9_1530 bacterial nucleoid protein Hbs
SaurJH9_0320 RecT protein
SaurJH9_2041 RecT protein
SaurJH9_1538 ATP-dependent DNA helicase RecQ
SaurJH9_0744 ATP-dependent DNA helicase RecQ
SaurJH9_1949 DNA-directed DNA polymerase
SaurJH9_1425 DNA-directed DNA polymerase
SaurJH9_1400 SOS-response transcriptional repressor, LexA
SaurJH9_1927 regulatory protein RecX
SaurJH9_1202 PHP C-terminal domain protein
SaurJH9_1514 DnaQ family exonuclease/DinG family helicase, putative
SaurJH9_0755 ribonucleoside-diphosphate reductase class Ib alpha subunit
SaurJH9_0756 ribonucleoside-diphosphate reductase class Ib beta subunit
SaurJH9_1760 phosphoesterase, RecJ domain protein
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
|
03029 Mitochondrial biogenesis [BR:saj03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Staphylococcus aureus subsp. aureus JH9 (MRSA/VISA)