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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:sbh03030]
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03410 Base excision repair [PATH:sbh03410]
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03420 Nucleotide excision repair [PATH:sbh03420]
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03430 Mismatch repair [PATH:sbh03430]
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03440 Homologous recombination [PATH:sbh03440]
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 SBI_05355 ssb; single-stranded DNA-binding protein
SBI_07054 single-strand DNA-binding protein
SBI_05386 recF; recombination protein F
SBI_07230 recO; DNA repair protein RecO
SBI_05125 recR; recombination protein RecR
SBI_03339 recA; recombinase A
SBI_07981 DNA polymerase I
SBI_02397 ruvA; Holliday junction DNA helicase RuvA
SBI_02396 ruvB; Holliday junction DNA helicase RuvB
SBI_02398 ruvC; Holliday junction resolvase
SBI_03496 recG; ATP-dependent DNA helicase RecG
SBI_07002 exodeoxyribonuclease V
SBI_07898 dnaE2; DNA polymerase III subunit alpha
SBI_00111 dnaE1; DNA polymerase III subunit alpha
SBI_05384 dnaN; DNA polymerase III subunit beta
SBI_05127 dnaZX; DNA polymerase III subunits gamma and tau
SBI_07150 holB2; DNA polymerase III, delta subunit
SBI_05862 holB1; DNA polymerase III subunit delta
SBI_02412 dnaQ1; DNA polymerase III subunit epsilon
SBI_03042 danQ2; DNA polymerase III subunit epsilon
SBI_08161 dnaQ3; DNA polymerase III subunit epsilon
SBI_02353 primosome assembly protein PriA
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K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining [PATH:sbh03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:sbh03000]
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03021 Transcription machinery [BR:sbh03021]
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03019 Messenger RNA biogenesis [BR:sbh03019]
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03041 Spliceosome
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03011 Ribosome [BR:sbh03011]
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03009 Ribosome biogenesis [BR:sbh03009]
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03016 Transfer RNA biogenesis [BR:sbh03016]
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03012 Translation factors [BR:sbh03012]
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03110 Chaperones and folding catalysts [BR:sbh03110]
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04131 Membrane trafficking [BR:sbh04131]
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04121 Ubiquitin system [BR:sbh04121]
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03051 Proteasome [BR:sbh03051]
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03032 DNA replication proteins [BR:sbh03032]
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03036 Chromosome and associated proteins [BR:sbh03036]
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03400 DNA repair and recombination proteins [BR:sbh03400]
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SBI_02848 methylated-DNA-protein-cysteine S-methyltransferase
SBI_05544 methylated-DNA/protein-cysteinemethyltransferase
SBI_00881 methylated-DNA-protein-cysteine S-methyltransferase
SBI_08012 methylated-DNA-protein-cysteine S-methyltransferase
SBI_08960 methylated-DNA--protein-cysteinemethyltransferas e
SBI_05212 deoxyribodipyrimidine photo-lyase
SBI_02055 uracil-DNA glycosylase
SBI_08769 uracil-DNA glycosylase
SBI_08206 putative DNA glycosylase
SBI_08212 3-methyladenine DNA glycosylase
SBI_05978 adenine glycosylase
SBI_05822 putative endonuclease III
SBI_04926 putative ATP-dependent DNA helicase
SBI_01839 NUDIX hydrolase
SBI_03302 DNA hydrolase
SBI_04143 putative NUDIX hydrolase
SBI_05015 hypothetical protein
SBI_05145 MutT-like protein
SBI_07968 hypothetical protein
SBI_03262 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
SBI_00882 alkylated DNA repair protein
SBI_08849 mug; G/U mismatch-specific DNA glycosylase
SBI_00938 hypothetical protein
SBI_02849 transcriptional regulator, AraC family protein
SBI_05545 ADA-like regulatory protein
SBI_00880 AraC family transcriptional regulator
SBI_04086 DNA-3-methyladenine glycosylase I
SBI_01756 mutM1; formamidopyrimidine-DNA glycosylase
SBI_03489 mutM2; formamidopyrimidine-DNA glycosylase
SBI_09067 mutM3; formamidopyrimidine-DNA glycosylase
SBI_03347 nei1; endonuclease VIII and DNA N-glycosylase with an AP lyase activity
SBI_07095 nei2; endonuclease VIII and DNA N-glycosylase with an AP lyase activity
SBI_02903 exonuclease
SBI_04430 putative exodeoxyribonuclease III
SBI_07665 endonuclease/exonuclease/phosphatase
SBI_07850 nfo; endonuclease IV
SBI_02648 endonuclease V
SBI_03577 ligA; NAD-dependent DNA ligase LigA
SBI_07981 DNA polymerase I
SBI_08021 uvrA; excinuclease ABC subunit A
SBI_09773 uvrA; excinuclease ABC subunit A
SBI_08014 excinuclease ABC subunit B
SBI_08024 uvrC; excinuclease ABC subunit C
SBI_04771 ATP-dependent DNA helicase II
SBI_04038 putative ATP-dependent DNA helicase
SBI_04046 ATP-dependent DNA helicase
SBI_06165 rpoB; DNA-directed RNA polymerase subunit beta
SBI_06166 rpoC; DNA-directed RNA polymerase subunit beta'
SBI_06217 DNA-directed RNA polymerase subunit alpha
SBI_09814 DNA-directed RNA polymerase subunit alpha
SBI_02356 DNA-directed RNA polymerase subunit omega
SBI_04314 transcription-repair coupling factor
SBI_04159 xseA; exodeoxyribonuclease VII large subunit
SBI_04160 xseB; exodeoxyribonuclease VII small subunit
SBI_07898 dnaE2; DNA polymerase III subunit alpha
SBI_00111 dnaE1; DNA polymerase III subunit alpha
SBI_05384 dnaN; DNA polymerase III subunit beta
SBI_07150 holB2; DNA polymerase III, delta subunit
SBI_05862 holB1; DNA polymerase III subunit delta
SBI_02412 dnaQ1; DNA polymerase III subunit epsilon
SBI_03042 danQ2; DNA polymerase III subunit epsilon
SBI_08161 dnaQ3; DNA polymerase III subunit epsilon
SBI_05127 dnaZX; DNA polymerase III subunits gamma and tau
SBI_05355 ssb; single-stranded DNA-binding protein
SBI_07054 single-strand DNA-binding protein
SBI_01145 putative DNA mismatch endonuclease
SBI_05771 hypothetical protein
SBI_05789 DNA mismatch endonuclease vsr
SBI_07002 exodeoxyribonuclease V
SBI_03339 recA; recombinase A
SBI_02397 ruvA; Holliday junction DNA helicase RuvA
SBI_02396 ruvB; Holliday junction DNA helicase RuvB
SBI_02398 ruvC; Holliday junction resolvase
SBI_02353 primosome assembly protein PriA
SBI_08827 exonuclease
SBI_08826 putative exonuclease
SBI_05982 DNA repair protein RadA
SBI_05386 recF; recombination protein F
SBI_03496 recG; ATP-dependent DNA helicase RecG
SBI_07230 recO; DNA repair protein RecO
SBI_05125 recR; recombination protein RecR
SBI_08231 putative recombination and DNA repair protein
SBI_00019 DEAD/DEAH box helicase domain-containing protein
SBI_06359 hypothetical protein
SBI_06360 hypothetical protein
SBI_03286 DNA topoisomerase IV subunit A
SBI_05389 gyrA; DNA gyrase subunit A
SBI_03296 DNA topoisomerase IV subunit B
SBI_05388 gyrB; DNA gyrase subunit B
SBI_09511 DNA topoisomerase IV subunit B
SBI_09512 gyrB; DNA gyrase subunit B
SBI_05860 putative DNA topoisomerase I
SBI_03508 putative histone-like DNA binding protein
SBI_06560 DNA-binding protein HU 1
SBI_02159 ATP-dependent DNA helicase
SBI_03304 ATP-dependent DNA helicase
SBI_08741 DNA polymerase IV
SBI_08277 hypothetical protein
SBI_03313 lexA; LexA repressor
SBI_08276 dnaE3; DNA polymerase III, alpha subunit
SBI_03338 recX; recombination regulator RecX
SBI_00937 PHP domain protein
SBI_03314 dinG; ATP-dependent helicase
SBI_03346 lhr; putative ATP-dependent DNA helicase
SBI_08236 nudF; ADP-ribose pyrophosphatase
SBI_03311 nrdA; vitamin B12-dependent ribonucleotide reductase
SBI_04001 ribonucleoside-diphosphate reductase, alpha subunit
SBI_04002 ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:sbh03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Streptomyces bingchenggensis