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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:sbs03030]
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03410 Base excision repair [PATH:sbs03410]
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03420 Nucleotide excision repair [PATH:sbs03420]
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03430 Mismatch repair [PATH:sbs03430]
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03440 Homologous recombination [PATH:sbs03440]
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 Sbal117_0941 single-stranded-DNA-specific exonuclease RecJ
Sbal117_3907 single-strand binding protein
Sbal117_4579 single-strand binding protein
Sbal117_4784 hypothetical protein
Sbal117_4704 hypothetical protein
Sbal117_0004 DNA replication and repair protein recF
Sbal117_1304 DNA repair protein RecO
Sbal117_2709 recombination protein RecR
Sbal117_3258 Protein recA
Sbal117_0053 DNA polymerase I
Sbal117_2250 Holliday junction ATP-dependent DNA helicase ruvA
Sbal117_2251 Holliday junction DNA helicase RuvB
Sbal117_2249 Crossover junction endodeoxyribonuclease ruvC
Sbal117_0449 ATP-dependent DNA helicase RecG
Sbal117_2403 exodeoxyribonuclease V, beta subunit
Sbal117_2402 exodeoxyribonuclease V, gamma subunit
Sbal117_2404 exodeoxyribonuclease V, alpha subunit
Sbal117_1574 DNA polymerase III, alpha subunit
Sbal117_0003 DNA polymerase III, beta subunit
Sbal117_2711 DNA polymerase III, subunits gamma and tau
Sbal117_3408 DNA polymerase III, delta subunit
Sbal117_2594 DNA polymerase III, delta prime subunit
Sbal117_2773 Exonuclease RNase T and DNA polymerase III
Sbal117_2117 DNA polymerase III, epsilon subunit
Sbal117_2486 DNA polymerase III, epsilon subunit
Sbal117_3251 DNA polymerase III chi subunit HolC
Sbal117_4002 primosomal protein N'
Sbal117_3792 Primosomal replication protein n
Sbal117_1740 primosomal replication protein N'', putative
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:sbs03000]
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03021 Transcription machinery [BR:sbs03021]
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03019 Messenger RNA biogenesis [BR:sbs03019]
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03041 Spliceosome
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03011 Ribosome [BR:sbs03011]
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03009 Ribosome biogenesis [BR:sbs03009]
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03016 Transfer RNA biogenesis [BR:sbs03016]
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03012 Translation factors [BR:sbs03012]
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03110 Chaperones and folding catalysts [BR:sbs03110]
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04131 Membrane trafficking [BR:sbs04131]
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04121 Ubiquitin system [BR:sbs04121]
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03051 Proteasome [BR:sbs03051]
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03032 DNA replication proteins [BR:sbs03032]
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03036 Chromosome and associated proteins [BR:sbs03036]
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03400 DNA repair and recombination proteins [BR:sbs03400]
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Sbal117_2939 methylated-DNA/protein-cysteine methyltransferase
Sbal117_3195 Deoxyribodipyrimidine photo-lyase
Sbal117_1064 Uracil-DNA glycosylase
Sbal117_3179 A/G-specific adenine glycosylase
Sbal117_2389 endonuclease III
Sbal117_0468 ERCC4 domain protein
Sbal117_4084 mutator MutT protein
Sbal117_0541 NUDIX hydrolase
Sbal117_0478 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Sbal117_3612 transcriptional regulator, AraC family
Sbal117_4030 deoxyribodipyrimidine photolyase-related protein
Sbal117_2940 DNA repair protein and transcriptional regulator, AraC family
Sbal117_0015 DNA-3-methyladenine glycosylase I
Sbal117_0075 Formamidopyrimidine-DNA glycosylase
Sbal117_2848 exodeoxyribonuclease III
Sbal117_0941 single-stranded-DNA-specific exonuclease RecJ
Sbal117_2785 DNA ligase (NAD(+))
Sbal117_0053 DNA polymerase I
Sbal117_3909 excinuclease ABC, A subunit
Sbal117_2380 UvrABC system protein B
Sbal117_2698 UvrABC system protein C
Sbal117_0545 DNA helicase II
Sbal117_4548 UvrD/REP helicase
Sbal117_4333 DNA-directed RNA polymerase subunit beta
Sbal117_4332 DNA-directed RNA polymerase subunit beta'
Sbal117_4301 DNA-directed RNA polymerase subunit alpha
Sbal117_0457 DNA-directed RNA polymerase subunit omega
Sbal117_2540 transcription-repair coupling factor
Sbal117_3259 DNA mismatch repair protein MutS
Sbal117_0658 DNA mismatch repair protein mutL
Sbal117_1284 DNA mismatch repair protein mutH
Sbal117_1808 Exodeoxyribonuclease I
Sbal117_3125 exodeoxyribonuclease VII, large subunit
Sbal117_1466 Exodeoxyribonuclease 7 small subunit
Sbal117_1574 DNA polymerase III, alpha subunit
Sbal117_0003 DNA polymerase III, beta subunit
Sbal117_3251 DNA polymerase III chi subunit HolC
Sbal117_3408 DNA polymerase III, delta subunit
Sbal117_2594 DNA polymerase III, delta prime subunit
Sbal117_2773 Exonuclease RNase T and DNA polymerase III
Sbal117_2117 DNA polymerase III, epsilon subunit
Sbal117_2486 DNA polymerase III, epsilon subunit
Sbal117_2711 DNA polymerase III, subunits gamma and tau
Sbal117_3907 single-strand binding protein
Sbal117_4579 single-strand binding protein
Sbal117_4784 hypothetical protein
Sbal117_4704 hypothetical protein
Sbal117_4266 DNA adenine methylase
Sbal117_2403 exodeoxyribonuclease V, beta subunit
Sbal117_2402 exodeoxyribonuclease V, gamma subunit
Sbal117_2404 exodeoxyribonuclease V, alpha subunit
Sbal117_3258 Protein recA
Sbal117_2250 Holliday junction ATP-dependent DNA helicase ruvA
Sbal117_2251 Holliday junction DNA helicase RuvB
Sbal117_2249 Crossover junction endodeoxyribonuclease ruvC
Sbal117_4002 primosomal protein N'
Sbal117_3792 Primosomal replication protein n
Sbal117_1740 primosomal replication protein N'', putative
Sbal117_1768 SMC domain protein
Sbal117_1767 nuclease SbcCD, D subunit
Sbal117_3355 DNA repair protein RadA
Sbal117_0004 DNA replication and repair protein recF
Sbal117_0449 ATP-dependent DNA helicase RecG
Sbal117_1304 DNA repair protein RecO
Sbal117_2709 recombination protein RecR
Sbal117_3291 DNA repair protein RecN
Sbal117_1484 Recombination-associated protein rdgC
Sbal117_1868 type III restriction protein res subunit
Sbal117_0537 protein of unknown function DUF853 NPT hydrolase
Sbal117_2152 DNA gyrase, A subunit
Sbal117_0005 DNA gyrase, B subunit
Sbal117_2633 DNA topoisomerase I
Sbal117_1879 histone family protein DNA-binding protein
Sbal117_0609 histone family protein DNA-binding protein
Sbal117_1720 histone family protein DNA-binding protein
Sbal117_4657 hypothetical protein
Sbal117_4656 hypothetical protein
Sbal117_4099 transcriptional regulator, Fis family
Sbal117_1993 Integration host factor subunit alpha
Sbal117_2161 Integration host factor subunit beta
Sbal117_2185 ATP-dependent DNA helicase, RecQ family
Sbal117_4508 ATP-dependent DNA helicase, RecQ family
Sbal117_0487 ATP-dependent DNA helicase, RecQ family
Sbal117_2989 histone family protein nucleoid-structuring protein H-NS
Sbal117_4637 histone family protein nucleoid-structuring protein H-NS
Sbal117_1034 DNA polymerase IV
Sbal117_2484 DNA-directed DNA polymerase
Sbal117_3694 DNA-directed DNA polymerase
Sbal117_3695 Peptidase S24/S26A/S26B, conserved region
Sbal117_2483 Peptidase S24/S26A/S26B, conserved region
Sbal117_0255 SOS-response transcriptional repressor, LexA
Sbal117_1743 DNA polymerase B region
Sbal117_3257 regulatory protein RecX
Sbal117_4170 ATP-dependent DNA helicase Rep
Sbal117_4100 UvrD/REP helicase
Sbal117_2560 helicase c2
Sbal117_1742 helicase c2
Sbal117_2149 ribonucleoside-diphosphate reductase, alpha subunit
Sbal117_2148 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K07455 recT; recombination protein RecT
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:sbs03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Shewanella baltica OS117