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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:sch03030]
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03410 Base excision repair [PATH:sch03410]
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 Sphch_1022 endonuclease III
Sphch_2613 Uracil-DNA glycosylase
Sphch_2078 HhH-GPD family protein
Sphch_2916 Formamidopyrimidine-DNA glycosylase
Sphch_1568 HhH-GPD family protein
Sphch_2269 DNA-3-methyladenine glycosylase I
Sphch_0617 Uracil-DNA glycosylase superfamily
Sphch_2436 phage SPO1 DNA polymerase-related protein
Sphch_0790 uracil-DNA glycosylase superfamily
Sphch_1520 exodeoxyribonuclease III Xth
Sphch_2210 exodeoxyribonuclease III Xth
Sphch_1681 DNA polymerase I
Sphch_1782 single-stranded-DNA-specific exonuclease RecJ
Sphch_1243 DNA ligase
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:sch03420]
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03430 Mismatch repair [PATH:sch03430]
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03440 Homologous recombination [PATH:sch03440]
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03450 Non-homologous end-joining [PATH:sch03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:sch03000]
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03021 Transcription machinery [BR:sch03021]
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03019 Messenger RNA biogenesis [BR:sch03019]
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03041 Spliceosome
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03011 Ribosome [BR:sch03011]
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03009 Ribosome biogenesis [BR:sch03009]
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03016 Transfer RNA biogenesis [BR:sch03016]
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03012 Translation factors [BR:sch03012]
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03110 Chaperones and folding catalysts [BR:sch03110]
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04131 Membrane trafficking [BR:sch04131]
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04121 Ubiquitin system [BR:sch04121]
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03051 Proteasome [BR:sch03051]
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03032 DNA replication proteins [BR:sch03032]
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03036 Chromosome and associated proteins [BR:sch03036]
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03400 DNA repair and recombination proteins [BR:sch03400]
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Sphch_1043 methylated-DNA/protein-cysteine methyltransferase
Sphch_0810 DNA photolyase FAD-binding protein
Sphch_2613 Uracil-DNA glycosylase
Sphch_2078 HhH-GPD family protein
Sphch_1022 endonuclease III
Sphch_1993 S1/P1 nuclease
Sphch_1317 NUDIX hydrolase
Sphch_1595 Deoxyuridine 5'-triphosphate nucleotidohydrolase
Sphch_0072 Ada DNA repair protein and transcriptional regulator, AraC family
Sphch_0617 Uracil-DNA glycosylase superfamily
Sphch_2436 phage SPO1 DNA polymerase-related protein
Sphch_0790 uracil-DNA glycosylase superfamily
Sphch_1568 HhH-GPD family protein
Sphch_2269 DNA-3-methyladenine glycosylase I
Sphch_2916 Formamidopyrimidine-DNA glycosylase
Sphch_1520 exodeoxyribonuclease III Xth
Sphch_2210 exodeoxyribonuclease III Xth
Sphch_1782 single-stranded-DNA-specific exonuclease RecJ
Sphch_1243 DNA ligase
Sphch_1681 DNA polymerase I
Sphch_0138 UvrABC system protein A
Sphch_1753 UvrABC system protein B
Sphch_0350 UvrABC system protein C
Sphch_0654 UvrD/REP helicase
Sphch_1930 UvrD/REP helicase
Sphch_3135 DNA-directed RNA polymerase subunit beta
Sphch_3136 DNA-directed RNA polymerase subunit beta'
Sphch_1872 DNA-directed RNA polymerase subunit alpha
Sphch_2480 DNA-directed RNA polymerase subunit omega
Sphch_0521 transcription-repair coupling factor
Sphch_2206 DNA mismatch repair protein mutS
Sphch_0844 DNA mismatch repair protein mutL
Sphch_2084 Exodeoxyribonuclease 7 large subunit
Sphch_1309 Exodeoxyribonuclease 7 small subunit
Sphch_0794 DNA polymerase III, alpha subunit
Sphch_1759 DNA polymerase III, beta subunit
Sphch_1580 DNA polymerase III chi subunit HolC
Sphch_2244 DNA polymerase III, delta subunit
Sphch_0716 DNA polymerase III delta' subunit
Sphch_2228 DNA polymerase III, epsilon subunit
Sphch_0635 DNA polymerase III, subunits gamma and tau
Sphch_2301 single-strand binding protein
Sphch_4134 single-strand binding protein
Sphch_4121 single-strand binding protein/Primosomal replication protein n
Sphch_1998 DNA mismatch endonuclease Vsr
Sphch_2411 DNA mismatch endonuclease Vsr
Sphch_1785 Protein recA
Sphch_2066 Holliday junction ATP-dependent DNA helicase ruvA
Sphch_2065 Holliday junction ATP-dependent DNA helicase ruvB
Sphch_2862 Crossover junction endodeoxyribonuclease ruvC
Sphch_0074 primosomal protein N'
Sphch_0091 DNA repair protein RadA
Sphch_1773 DNA replication and repair protein recF
Sphch_0523 DEAD/DEAH box helicase domain protein
Sphch_0370 DNA repair protein recO
Sphch_1544 Recombination protein recR
Sphch_1244 DNA repair protein RecN
Sphch_0727 double-strand break repair helicase AddA
Sphch_0728 double-strand break repair protein AddB
Sphch_3130 protein of unknown function DUF853 NPT hydrolase
Sphch_2415 DEAD/DEAH box helicase domain protein
Sphch_3000 DNA repair protein
Sphch_2999 DNA ligase D
Sphch_0673 DNA gyrase, A subunit
Sphch_2270 DNA gyrase, B subunit
Sphch_0773 DNA topoisomerase I
Sphch_3003 DNA topoisomerase
Sphch_0638 histone family protein DNA-binding protein
Sphch_3198 histone family protein DNA-binding protein
Sphch_0015 Integration host factor subunit alpha
Sphch_0648 integration host factor, beta subunit
Sphch_1950 ATP-dependent DNA helicase RecQ
Sphch_2172 DNA polymerase IV
Sphch_1745 SOS-response transcriptional repressor, LexA
Sphch_0024 hypothetical protein
Sphch_0023 putative nucleotidyltransferase
Sphch_0022 Error-prone DNA polymerase
Sphch_1691 regulatory protein RecX
Sphch_0019 helicase c2
Sphch_2267 DEAD/H associated domain protein
Sphch_3180 ribonucleoside-diphosphate reductase, alpha subunit
Sphch_3182 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:sch03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Sphingobium chlorophenolicum