09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:sci03030]
03410 Base excision repair [PATH:sci03410]
B446_20395 endonuclease III B446_05680 uracil-DNA glycosylase B446_06925 uracil-DNA glycosylase B446_20885 adenine glycosylase B446_09280 3-methyladenine DNA glycosylase B446_26190 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase B446_31845 DNA-formamidopyrimidine glycosylase B446_26940 DNA glycosylase B446_13915 endonuclease VIII and DNA N-glycosylase with an AP lyase activity B446_28890 ADA-like regulatory protein B446_29635 ADA-like regulatory protein B446_24175 DNA-3-methyladenine glycosylase I B446_06575 G/U mismatch-specific DNA glycosylase B446_10360 hypothetical protein B446_21375 DNA polymerase related protein B446_29415 exonuclease B446_16465 exodeoxyribonuclease III B446_11085 apurinic endonuclease Apn1 B446_10445 DNA polymerase I B446_25775 ligA; NAD-dependent DNA ligase LigA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:sci03420]
03430 Mismatch repair [PATH:sci03430]
03440 Homologous recombination [PATH:sci03440]
03450 Non-homologous end-joining [PATH:sci03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:sci03000]
03021 Transcription machinery [BR:sci03021]
03019 Messenger RNA biogenesis [BR:sci03019]
03041 Spliceosome
03011 Ribosome [BR:sci03011]
03009 Ribosome biogenesis [BR:sci03009]
03016 Transfer RNA biogenesis [BR:sci03016]
03012 Translation factors [BR:sci03012]
03110 Chaperones and folding catalysts [BR:sci03110]
04131 Membrane trafficking [BR:sci04131]
04121 Ubiquitin system [BR:sci04121]
03051 Proteasome [BR:sci03051]
03032 DNA replication proteins [BR:sci03032]
03036 Chromosome and associated proteins [BR:sci03036]
03400 DNA repair and recombination proteins [BR:sci03400]
B446_32585 methylated-DNA--protein-cysteine methyltransferase B446_10260 methylated-DNA/protein-cysteine methyltransferase B446_29640 methylated-DNA--protein-cysteine S-methyltransferase B446_04565 deoxyribodipyrimidine photo-lyase B446_05680 uracil-DNA glycosylase B446_06925 uracil-DNA glycosylase B446_09280 3-methyladenine DNA glycosylase B446_20885 adenine glycosylase B446_20395 endonuclease III B446_17385 ATP-dependent DNA helicase B446_23915 mutT-like protein B446_27225 DNA hydrolase B446_18080 hypothetical protein B446_14015 hypothetical protein B446_27565 NUDIX hydrolase B446_09940 NUDIX hydrolase B446_27460 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase B446_05435 DNA repair protein B446_06575 G/U mismatch-specific DNA glycosylase B446_10360 hypothetical protein B446_21375 DNA polymerase related protein B446_28890 ADA-like regulatory protein B446_29635 ADA-like regulatory protein B446_24175 DNA-3-methyladenine glycosylase I B446_26190 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase B446_31845 DNA-formamidopyrimidine glycosylase B446_26940 DNA glycosylase B446_13915 endonuclease VIII and DNA N-glycosylase with an AP lyase activity B446_29415 exonuclease B446_16465 exodeoxyribonuclease III B446_11085 apurinic endonuclease Apn1 B446_30685 endonuclease V B446_25775 ligA; NAD-dependent DNA ligase LigA B446_10445 DNA polymerase I B446_10185 uvrA; excinuclease ABC subunit A B446_31550 excinuclease ABC subunit A B446_31965 excinuclease ABC subunit A B446_10245 excinuclease ABC subunit B B446_10160 uvrC; excinuclease ABC subunit C B446_24415 ATP-dependent DNA helicase B446_24435 ATP-dependent DNA helicase B446_22520 ATP-dependent DNA helicase II B446_21985 rpoB; DNA-directed RNA polymerase subunit beta B446_21990 DNA-directed RNA polymerase subunit beta' B446_22190 DNA-directed RNA polymerase subunit alpha B446_07635 rpoZ; DNA-directed RNA polymerase subunit omega B446_16135 transcriptional-repair coupling factor B446_23645 xseA; exodeoxyribonuclease VII large subunit B446_23640 exodeoxyribonuclease VII small subunit B446_10825 dnaE; DNA polymerase III subunit alpha B446_19170 DNA polymerase III subunit beta B446_13255 DNA polymerase III subunit delta B446_20535 DNA polymerase III subunit delta' B446_07915 DNA polymerase III subunit epsilon B446_28575 DNA polymerase III subunit epsilon B446_09500 DNA polymerase III subunit epsilon B446_18430 DNA polymerase III subunits gamma and tau B446_19030 single-stranded DNA-binding protein B446_14250 single-strand DNA-binding protein B446_02410 hypothetical protein B446_14510 deoxyribonuclease B446_26985 recA; recombinase A B446_07835 ruvA; Holliday junction DNA helicase RuvA B446_07830 ruvB; Holliday junction DNA helicase RuvB B446_07840 ruvC; Holliday junction resolvase B446_07620 primosome assembly protein PriA B446_06710 exonuclease B446_06715 exonuclease B446_20900 DNA repair protein RadA B446_19180 recF; recombination protein F B446_26155 ATP-dependent DNA helicase RecG B446_12905 recO; DNA repair protein RecO B446_20175 recR; recombination protein RecR B446_09220 DNA recombination and repair protein B446_18495 hypothetical protein B446_24990 hypothetical protein B446_25000 Ku70/Ku80 protein B446_04080 ATP-dependent DNA ligase B446_24985 DNA ligase B446_19195 DNA gyrase subunit A B446_27335 DNA topoisomerase IV subunit A B446_19190 gyrB; DNA gyrase subunit B B446_27255 DNA topoisomerase IV subunit B B446_20525 DNA topoisomerase I B446_32375 DNA topoisomerase B446_26085 histone-like DNA binding protein B446_15385 DNA-binding protein HU 1 B446_21560 helicase B446_27210 ATP-dependent DNA helicase B446_07110 DNA polymerase IV B446_27155 LexA repressor B446_09050 DNA polymerase III subunit alpha B446_26990 recX; recombination regulator RecX B446_27150 ATP-dependent helicase B446_26945 ATP-dependent DNA helicase B446_09185 ADP-ribose pyrophosphatase B446_27165 vitamin B12-dependent ribonucleotide reductase B446_24630 ribonucleoside-diphosphate reductase subunit alpha B446_24625 ribonucleoside-diphosphate reductase
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K10979 ku; DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:sci03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Streptomyces collinus KEGG Orthology (KO) - Streptomyces collinus