DNA Repair and Recombination Proteins - Shewanella denitrificans

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
       RecBC pathway proteins
         Sden_2352 exodeoxyribonuclease V, beta subunit
         Sden_2351 exodeoxyribonuclease V, gamma subunit
         Sden_2353 exodeoxyribonuclease V, alpha subunit
         Sden_1208 recA protein
         Sden_1884 Holliday junction DNA helicase RuvA
         Sden_1883 Holliday junction DNA helicase RuvB
         Sden_1885 crossover junction endodeoxyribonuclease RuvC
         Sden_3356 primosomal protein N'
         Sden_0516 restart primosome assembly protein PriB
         Sden_2431 primosomal replication protein N'', putative
         Sden_2287 Exodeoxyribonuclease I subunit C
         Sden_2505 SMC protein-like protein
         Sden_2506 Exodeoxyribonuclease I subunit D
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] 
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] 
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03553 recA; recombination protein RecA 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] 
K02686 priB; primosomal replication protein N 
K04067 priC; primosomal replication protein N'' 
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
K03546 sbcC; DNA repair protein SbcC/Rad50 
K03547 sbcD; DNA repair protein SbcD/Mre11 
       RecFOR pathway proteins
       AddAB pathway proteins
       Other HR factor
       Archaeal homologous recombinant proteins
     NHEJ (non-homologous end-joining)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024