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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:sdy03030]
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 SDY_1128 holE; DNA polymerase III, theta subunit
SDY_0234 dnaQ; DNA polymerase III, epsilon subunit
SDY_0200 dnaE; DNA polymerase III, alpha subunit
SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits
SDY_2051 holB; DNA polymerase III, delta prime subunit
SDY_0562 holA; DNA polymerase III, delta subunit
SDY_4631 holD; DNA polymerase III, psi subunit
SDY_4283 holC; DNA polymerase III, chi subunit
SDY_4183 dnaN; DNA polymerase III, beta-subunit
SDY_4522 dnaB; replicative DNA helicase
SDY_3250 dnaG; DNA primase
SDY_4508 ssb; ssDNA-binding protein
SDY_0233 rnhA; RNase HI
SDY_0199 rnhB; RNAse HII
SDY_3879 polA; PolA
SDY_2608 lig; DNA ligase
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K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:sdy03410]
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03420 Nucleotide excision repair [PATH:sdy03420]
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03430 Mismatch repair [PATH:sdy03430]
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SDY_2933 mutS; methyl-directed mismatch repair
SDY_4419 mutL; MutL
SDY_3048 mutH; methyl-directed mismatch repair
SDY_3932 uvrD; DNA-dependent ATPase I and helicase II
SDY_2231 sbcB; exonuclease I
SDY_2705 xseA; exonuclease VII, large subunit
SDY_0308 xseB; exonuclease VII, small subunit
SDY_1130 conserved hypothetical protein
SDY_3190 recJ; ssDNA exonuclease, 5' --> 3' specific
SDY_4508 ssb; ssDNA-binding protein
SDY_0200 dnaE; DNA polymerase III, alpha subunit
SDY_4183 dnaN; DNA polymerase III, beta-subunit
SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits
SDY_0562 holA; DNA polymerase III, delta subunit
SDY_2051 holB; DNA polymerase III, delta prime subunit
SDY_0234 dnaQ; DNA polymerase III, epsilon subunit
SDY_1128 holE; DNA polymerase III, theta subunit
SDY_4283 holC; DNA polymerase III, chi subunit
SDY_4631 holD; DNA polymerase III, psi subunit
SDY_2608 lig; DNA ligase
SDY_3692 dam; DNA adenine methylase
|
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
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03440 Homologous recombination [PATH:sdy03440]
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SDY_3190 recJ; ssDNA exonuclease, 5' --> 3' specific
SDY_4508 ssb; ssDNA-binding protein
SDY_4182 recF; ssDNA and dsDNA binding, ATP binding
SDY_2806 recO; RecO
SDY_0447 recR; recombination and repair protein
SDY_2895 recA; DNA-dependent ATPase, DNA- and ATP-dependent coprotease
SDY_3879 polA; PolA
SDY_1148 ruvA; Holliday junction helicase subunit B
SDY_1147 ruvB; Holliday junction helicase subunit A
SDY_1150 ruvC; Holliday junction nuclease
SDY_4084 recG; DNA helicase
SDY_3037 recB; ATP-dependent dsDNA/ssDNA exonuclease V subunit
SDY_3039 recC; ATP-dependent dsDNA/ssDNA exonuclease V subunit
SDY_3036 recD; ATP-dependent dsDNA/ssDNA exonuclease V subunit
SDY_0200 dnaE; DNA polymerase III, alpha subunit
SDY_4183 dnaN; DNA polymerase III, beta-subunit
SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits
SDY_0562 holA; DNA polymerase III, delta subunit
SDY_2051 holB; DNA polymerase III, delta prime subunit
SDY_0234 dnaQ; DNA polymerase III, epsilon subunit
SDY_1128 holE; DNA polymerase III, theta subunit
SDY_4283 holC; DNA polymerase III, chi subunit
SDY_4631 holD; DNA polymerase III, psi subunit
SDY_3802 priA; primosomal protein N'
SDY_4370 priB; primosomal replication protein N
SDY_0452 priC; primosomal replication protein N''
SDY_4616 dnaT; DNA biosynthesis
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:sdy03000]
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03021 Transcription machinery [BR:sdy03021]
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03019 Messenger RNA biogenesis [BR:sdy03019]
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03041 Spliceosome
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03011 Ribosome [BR:sdy03011]
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03009 Ribosome biogenesis [BR:sdy03009]
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03016 Transfer RNA biogenesis [BR:sdy03016]
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03012 Translation factors [BR:sdy03012]
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03110 Chaperones and folding catalysts [BR:sdy03110]
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04131 Membrane trafficking [BR:sdy04131]
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04121 Ubiquitin system [BR:sdy04121]
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03051 Proteasome [BR:sdy03051]
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03032 DNA replication proteins [BR:sdy03032]
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SDY_0233 rnhA; RNase HI
SDY_1045 dcm; DNA cytosine methylase
SDY_3726 hupA; DNA-binding protein HU-alpha
SDY_0292 hupB; DNA-binding protein HU-beta
SDY_1807 himA; integration host factor, alpha subunit
SDY_2346 himD; integration host factor, beta subunit
SDY_4184 dnaA; DnaA
SDY_4522 dnaB; replicative DNA helicase
SDY_4615 dnaC; chromosome replication
SDY_3250 dnaG; DNA primase
SDY_4508 ssb; ssDNA-binding protein
SDY_0200 dnaE; DNA polymerase III, alpha subunit
SDY_4183 dnaN; DNA polymerase III, beta-subunit
SDY_4283 holC; DNA polymerase III, chi subunit
SDY_0562 holA; DNA polymerase III, delta subunit
SDY_2051 holB; DNA polymerase III, delta prime subunit
SDY_0234 dnaQ; DNA polymerase III, epsilon subunit
SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits
SDY_4631 holD; DNA polymerase III, psi subunit
SDY_1128 holE; DNA polymerase III, theta subunit
SDY_0199 rnhB; RNAse HII
SDY_3879 polA; PolA
SDY_2608 lig; DNA ligase
SDY_1826 tus; DNA-binding protein
SDY_3692 dam; DNA adenine methylase
SDY_0627 seqA; negative modulator of initiation of replication
SDY_2685 putative DNA replication factor
SDY_2423 gyrA; DNA gyrase, subunit A
SDY_4181 gyrB; DNA gyrase subunit B
SDY_3218 parC; DNA topoisomerase IV subunit A
SDY_3210 parE; DNA topoisomerase IV subunit B
SDY_1344 topA; DNA topoisomerase type I, omega protein
SDY_1510 topB; DNA topoisomerase III
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02315 dnaC; DNA replication protein DnaC
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10748 tus; DNA replication terminus site-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03645 seqA; negative modulator of initiation of replication
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:sdy03036]
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03400 DNA repair and recombination proteins [BR:sdy03400]
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SDY_1416 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase
SDY_0643 phrB; deoxyribodipyrimidine photolyase
SDY_2823 ung; uracil-DNA-glycosylase
SDY_3111 mutY; adenine glycosylase
SDY_1856 nth; endonuclease III
SDY_0129 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase
SDY_4070 dut; deoxyuridinetriphosphatase
SDY_0863 ada; O6-methylguanine-DNA methyltransferase
SDY_0864 alkB; DNA repair system specific for alkylated DNA
SDY_3252 ygjF; conserved hypothetical protein
SDY_2194 alkA; 3-methyl-adenine DNA glycosylase II, inducible
SDY_4353 tag; 3-methyl-adenine DNA glycosylase I, constitutive
SDY_4065 mutM; formamidopyrimidine DNA glycosylase
SDY_0649 nei; endonuclease VIII and DNA N-glycosylase with an AP lyase activity
SDY_1527 xthA; exonuclease III
SDY_2107 nfo; endonuclease IV
SDY_3728 nfi; endonuclease V
SDY_3190 recJ; ssDNA exonuclease, 5' --> 3' specific
SDY_2608 lig; DNA ligase
SDY_3879 polA; PolA
SDY_4509 uvrA; excision nuclease subunit A
SDY_0827 uvrB; excision nuclease subunit B
SDY_1105 uvrC; excinuclease ABC, subunit C
SDY_1539 putative excinuclease subunit
SDY_3932 uvrD; DNA-dependent ATPase I and helicase II
SDY_3741 rpoB; RNA polymerase, beta subunit
SDY_3740 rpoC; RNA polymerase, beta prime subunit
SDY_3471 rpoA; RNA polymerase, alpha subunit
SDY_4081 rpoZ; DNA-directed RNA polymerase omega chain
SDY_2036 mfd; transcription-repair coupling factor
SDY_2933 mutS; methyl-directed mismatch repair
SDY_4419 mutL; MutL
SDY_3048 mutH; methyl-directed mismatch repair
SDY_2231 sbcB; exonuclease I
SDY_2705 xseA; exonuclease VII, large subunit
SDY_0308 xseB; exonuclease VII, small subunit
SDY_1130 conserved hypothetical protein
SDY_0200 dnaE; DNA polymerase III, alpha subunit
SDY_4183 dnaN; DNA polymerase III, beta-subunit
SDY_4283 holC; DNA polymerase III, chi subunit
SDY_0562 holA; DNA polymerase III, delta subunit
SDY_2051 holB; DNA polymerase III, delta prime subunit
SDY_0234 dnaQ; DNA polymerase III, epsilon subunit
SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits
SDY_4631 holD; DNA polymerase III, psi subunit
SDY_1128 holE; DNA polymerase III, theta subunit
SDY_4508 ssb; ssDNA-binding protein
SDY_3692 dam; DNA adenine methylase
SDY_1046 vsr; DNA mismatch endonuclease, patch repair protein
SDY_3037 recB; ATP-dependent dsDNA/ssDNA exonuclease V subunit
SDY_3039 recC; ATP-dependent dsDNA/ssDNA exonuclease V subunit
SDY_3036 recD; ATP-dependent dsDNA/ssDNA exonuclease V subunit
SDY_2895 recA; DNA-dependent ATPase, DNA- and ATP-dependent coprotease
SDY_1148 ruvA; Holliday junction helicase subunit B
SDY_1147 ruvB; Holliday junction helicase subunit A
SDY_1150 ruvC; Holliday junction nuclease
SDY_1435 putative endonuclease of prophage CP-933O
SDY_3802 priA; primosomal protein N'
SDY_4370 priB; primosomal replication protein N
SDY_0452 priC; primosomal replication protein N''
SDY_4616 dnaT; DNA biosynthesis
SDY_0341 sbcC; ATP-dependent dsDNA exonuclease
SDY_4650 sms; probable ATP-dependent protease
SDY_4182 recF; ssDNA and dsDNA binding, ATP binding
SDY_4084 recG; DNA helicase
SDY_2806 recO; RecO
SDY_0447 recR; recombination and repair protein
SDY_2789 recN; protein used in recombination and DNA repair
SDY_0344 yaiD; conserved hypothetical protein
SDY_0895 yejH; putative ATP-dependent helicase
SDY_4287 yjgR; conserved hypothetical protein
SDY_2423 gyrA; DNA gyrase, subunit A
SDY_4181 gyrB; DNA gyrase subunit B
SDY_1344 topA; DNA topoisomerase type I, omega protein
SDY_3726 hupA; DNA-binding protein HU-alpha
SDY_0292 hupB; DNA-binding protein HU-beta
SDY_3438 fis; site-specific DNA inversion stimulation factor
SDY_1807 himA; integration host factor, alpha subunit
SDY_2346 himD; integration host factor, beta subunit
SDY_3921 recQ; ATP-dependent DNA helicase
SDY_3586 hypothetical protein
SDY_3582 hypothetical protein
SDY_1289 hns; DNA-binding protein HLP-II
SDY_0483 dinP; damage-inducible protein P
SDY_1221 umuC; SOS mutagenesis and repair
SDY_1220 umuD; UmuD
SDY_4531 lexA; regulator for SOS regulon
SDY_4076 dinD; DNA-damage-inducible protein
SDY_2092 dinI; damage-inducible protein I
SDY_2894 oraA; OraA
SDY_3665 yhgA; conserved hypothetical protein
SDY_0042 yadD; conserved hypothetical protein
SDY_4600 conserved hypothetical protein
SDY_2439 yfaD; conserved hypothetical protein
SDY_3971 rep; rep helicase
SDY_0937 helD; DNA helicase IV
SDY_0800 dinG; probably ATP-dependent helicase
SDY_1712 putative enzyme
SDY_2428 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit, B1
SDY_2868 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit
SDY_2429 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit, B2
SDY_2869 nrdF; ribonucleoside-diphosphate reductase 2, beta chain
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
K03546 sbcC; DNA repair protein SbcC/Rad50
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14623 dinD; DNA-damage-inducible protein D
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K01157 rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-]
K24088 rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-]
K24089 rpnD; recombination-promoting nuclease RpnD [EC:3.1.21.-]
K24090 rpnE; recombination-promoting nuclease RpnE
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:sdy03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Shigella dysenteriae Sd197