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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:seb03030]
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 STM474_1908 holE; DNA polymerase III subunit theta
STM474_p1044 putative inner membrane protein
STM474_0275 dnaQ; DNA polymerase III, epsilon subunit
STM474_p204 yacC; YacC protein
STM474_0240 dnaE; DNA polymerase III subunit alpha
STM474_0504 dnaX; DNA polymerase III, tau subunit
STM474_1198 holB; DNA polymerase III subunit delta'
STM474_0667 holA; DNA polymerase III subunit delta
STM474_4761 holD; DNA polymerase III subunit psi
STM474_4674 holC; DNA polymerase III subunit chi
STM474_4015 dnaN; DNA polymerase III subunit beta
STM474_4440 dnaB; replicative DNA helicase
STM474_3364 dnaG; DNA primase
STM474_4450 ssb; single-strand DNA-binding protein
STM474_p1043 ssbB; single-strand DNA binding protein
STM474_p228 hypothetical protein
STM474_0274 rnhA; ribonuclease H
STM474_0239 rnhB; ribonuclease HII
STM474_4178 yjcD; putative xanthine/uracil permeases family protein
STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein
STM474_2529 ligA; NAD-dependent DNA ligase LigA
|
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:seb03410]
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03420 Nucleotide excision repair [PATH:seb03420]
|
03430 Mismatch repair [PATH:seb03430]
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STM474_3049 mutS; DNA mismatch repair protein MutS
STM474_4556 mutL; DNA mismatch repair protein MutL
STM474_3152 mutH; DNA mismatch repair protein
STM474_4128 uvrD; DNA-dependent helicase II
STM474_2152 sbcB; exonuclease I
STM474_2613 xseA; exodeoxyribonuclease VII large subunit
STM474_0444 xseB; exodeoxyribonuclease VII small subunit
STM474_1910 exoX; exodeoxyribonuclease X
STM474_3189 recJ; ssDNA exonuclease RecJ
STM474_4450 ssb; single-strand DNA-binding protein
STM474_p1043 ssbB; single-strand DNA binding protein
STM474_p228 hypothetical protein
STM474_0240 dnaE; DNA polymerase III subunit alpha
STM474_4015 dnaN; DNA polymerase III subunit beta
STM474_0504 dnaX; DNA polymerase III, tau subunit
STM474_0667 holA; DNA polymerase III subunit delta
STM474_1198 holB; DNA polymerase III subunit delta'
STM474_0275 dnaQ; DNA polymerase III, epsilon subunit
STM474_p204 yacC; YacC protein
STM474_1908 holE; DNA polymerase III subunit theta
STM474_p1044 putative inner membrane protein
STM474_4674 holC; DNA polymerase III subunit chi
STM474_4761 holD; DNA polymerase III subunit psi
STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein
STM474_2529 ligA; NAD-dependent DNA ligase LigA
STM474_2855 DNA adenine methylase
STM474_3651 dam; DNA adenine methylase
|
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
|
03440 Homologous recombination [PATH:seb03440]
|
STM474_3189 recJ; ssDNA exonuclease RecJ
STM474_4450 ssb; single-strand DNA-binding protein
STM474_p1043 ssbB; single-strand DNA binding protein
STM474_p228 hypothetical protein
STM474_4014 recF; recombination protein F
STM474_2684 recO; DNA repair protein RecO
STM474_0506 recR; recombination protein RecR
STM474_2967 recA; recombinase A
STM474_4178 yjcD; putative xanthine/uracil permeases family protein
STM474_1927 ruvA; Holliday junction DNA helicase RuvA
STM474_1926 ruvB; Holliday junction DNA helicase RuvB
STM474_1931 ruvC; Holliday junction resolvase
STM474_3918 recG; ATP-dependent DNA helicase RecG
STM474_3140 recB; exonuclease V subunit beta
STM474_3142 recC; exodeoxyribonuclease V, gamma subunit
STM474_3139 recD; exonuclease V subunit alpha
STM474_0240 dnaE; DNA polymerase III subunit alpha
STM474_4015 dnaN; DNA polymerase III subunit beta
STM474_0504 dnaX; DNA polymerase III, tau subunit
STM474_0667 holA; DNA polymerase III subunit delta
STM474_1198 holB; DNA polymerase III subunit delta'
STM474_0275 dnaQ; DNA polymerase III, epsilon subunit
STM474_p204 yacC; YacC protein
STM474_1908 holE; DNA polymerase III subunit theta
STM474_p1044 putative inner membrane protein
STM474_4674 holC; DNA polymerase III subunit chi
STM474_4761 holD; DNA polymerase III subunit psi
STM474_4278 priA; primosome assembly protein PriA
STM474_4589 priB; primosomal replication protein N
STM474_0501 priC; primosomal replication protein N
STM474_4748 dnaI; primosomal protein DnaI
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
|
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09160 Human Diseases
|
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09180 Brite Hierarchies
|
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:seb03000]
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03021 Transcription machinery [BR:seb03021]
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03019 Messenger RNA biogenesis [BR:seb03019]
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03041 Spliceosome
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03011 Ribosome [BR:seb03011]
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03009 Ribosome biogenesis [BR:seb03009]
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03016 Transfer RNA biogenesis [BR:seb03016]
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03012 Translation factors [BR:seb03012]
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03110 Chaperones and folding catalysts [BR:seb03110]
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04131 Membrane trafficking [BR:seb04131]
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04121 Ubiquitin system [BR:seb04121]
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03051 Proteasome [BR:seb03051]
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03032 DNA replication proteins [BR:seb03032]
|
STM474_0274 rnhA; ribonuclease H
STM474_2023 dcm; DNA cytosine methylase
STM474_4356 hupA; transcriptional regulator HU subunit alpha
STM474_0472 hupB; transcriptional regulator HU subunit beta
STM474_1343 ihfA; integration host factor subunit alpha
STM474_0968 infB; integration host factor subunit beta
STM474_4016 dnaA; chromosomal replication initiator protein DnaA
STM474_4440 dnaB; replicative DNA helicase
STM474_4747 dnaC; DNA replication protein DnaC
STM474_3364 dnaG; DNA primase
STM474_4450 ssb; single-strand DNA-binding protein
STM474_p1043 ssbB; single-strand DNA binding protein
STM474_p228 hypothetical protein
STM474_0240 dnaE; DNA polymerase III subunit alpha
STM474_4015 dnaN; DNA polymerase III subunit beta
STM474_4674 holC; DNA polymerase III subunit chi
STM474_0667 holA; DNA polymerase III subunit delta
STM474_1198 holB; DNA polymerase III subunit delta'
STM474_0275 dnaQ; DNA polymerase III, epsilon subunit
STM474_p204 yacC; YacC protein
STM474_0504 dnaX; DNA polymerase III, tau subunit
STM474_4761 holD; DNA polymerase III subunit psi
STM474_1908 holE; DNA polymerase III subunit theta
STM474_p1044 putative inner membrane protein
STM474_0239 rnhB; ribonuclease HII
STM474_4178 yjcD; putative xanthine/uracil permeases family protein
STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein
STM474_2529 ligA; NAD-dependent DNA ligase LigA
STM474_1477 tus; DNA replication terminus site-binding protein
STM474_2855 DNA adenine methylase
STM474_3651 dam; DNA adenine methylase
STM474_0718 seqa; Protein seqA
STM474_2599 yfgE; DNA replication initiation factor
STM474_2368 gyrA; DNA gyrase, A subunit
STM474_4013 gyrB; DNA gyrase subunit B
STM474_3327 parC; DNA topoisomerase IV subunit A
STM474_3335 parE; DNA topoisomerase IV subunit B
STM474_1731 topA; DNA topoisomerase I
STM474_1302 topB; DNA topoisomerase III
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02315 dnaC; DNA replication protein DnaC
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10748 tus; DNA replication terminus site-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03645 seqA; negative modulator of initiation of replication
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:seb03036]
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03400 DNA repair and recombination proteins [BR:seb03400]
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STM474_1672 ogt; O-6-alkylguanine-DNA:cysteine-protein methyltransferase
STM474_0731 phrB; deoxyribodipyrimidine photolyase
STM474_2760 ung; uracil-DNA glycosylase
STM474_3258 mutY; adenine DNA glycosylase
STM474_1460 nth; endonuclease III
STM474_0143 mutT; nucleoside triphosphate pyrophosphohydrolase
STM474_3904 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
STM474_2362 ada; O6-methylguanine-DNA methyltransferase/transcription activator/repressor
STM474_2361 alkB; DNA repair system protein
STM474_3366 mug; G/U mismatch-specific DNA glycosylase
STM474_2210 alkA; 3-methyl-adenine DNA glycosylase II
STM474_3814 tag; 3-methyl-adenine DNA glycosylase I
STM474_3899 mutM; formamidopyrimidine-DNA glycosylase
STM474_0751 nei; endonuclease VIII
STM474_1306 xthA; exonuclease III
STM474_2294 nfo; endonuclease IV
STM474_4354 nfi; endonuclease V
STM474_3189 recJ; ssDNA exonuclease RecJ
STM474_3913 ligA; NAD-dependent DNA ligase adenylation domain protein
STM474_2529 ligA; NAD-dependent DNA ligase LigA
STM474_4178 yjcD; putative xanthine/uracil permeases family protein
STM474_4448 uvrA; excinuclease ABC subunit A
STM474_0824 uvrB; excinuclease ABC, B subunit
STM474_1978 uvrC; excinuclease ABC, C subunit
STM474_1313 nucleotide excision repair endonuclease
STM474_4128 uvrD; DNA-dependent helicase II
STM474_4338 rpoB; DNA-directed RNA polymerase subunit beta
STM474_4339 rpoC; DNA-directed RNA polymerase subunit beta'
STM474_3580 rpoA; DNA-directed RNA polymerase subunit alpha
STM474_3915 rpoZ; DNA-directed RNA polymerase subunit omega
STM474_1213 mfd; transcription-repair coupling factor
STM474_3049 mutS; DNA mismatch repair protein MutS
STM474_4556 mutL; DNA mismatch repair protein MutL
STM474_3152 mutH; DNA mismatch repair protein
STM474_2152 sbcB; exonuclease I
STM474_2613 xseA; exodeoxyribonuclease VII large subunit
STM474_0444 xseB; exodeoxyribonuclease VII small subunit
STM474_1910 exoX; exodeoxyribonuclease X
STM474_0240 dnaE; DNA polymerase III subunit alpha
STM474_4015 dnaN; DNA polymerase III subunit beta
STM474_4674 holC; DNA polymerase III subunit chi
STM474_0667 holA; DNA polymerase III subunit delta
STM474_1198 holB; DNA polymerase III subunit delta'
STM474_0275 dnaQ; DNA polymerase III, epsilon subunit
STM474_p204 yacC; YacC protein
STM474_0504 dnaX; DNA polymerase III, tau subunit
STM474_4761 holD; DNA polymerase III subunit psi
STM474_1908 holE; DNA polymerase III subunit theta
STM474_p1044 putative inner membrane protein
STM474_4450 ssb; single-strand DNA-binding protein
STM474_p1043 ssbB; single-strand DNA binding protein
STM474_p228 hypothetical protein
STM474_2855 DNA adenine methylase
STM474_3651 dam; DNA adenine methylase
STM474_2022 vsr; DNA mismatch endonuclease
STM474_3140 recB; exonuclease V subunit beta
STM474_3142 recC; exodeoxyribonuclease V, gamma subunit
STM474_3139 recD; exonuclease V subunit alpha
STM474_2967 recA; recombinase A
STM474_1927 ruvA; Holliday junction DNA helicase RuvA
STM474_1926 ruvB; Holliday junction DNA helicase RuvB
STM474_1931 ruvC; Holliday junction resolvase
STM474_4278 priA; primosome assembly protein PriA
STM474_4589 priB; primosomal replication protein N
STM474_0501 priC; primosomal replication protein N
STM474_4748 dnaI; primosomal protein DnaI
STM474_0412 sbcC; exonuclease subunit SbcC
STM474_0413 sbcD; exonuclease subunit SbcD
STM474_4785 radA; DNA repair protein RadA
STM474_4014 recF; recombination protein F
STM474_3918 recG; ATP-dependent DNA helicase RecG
STM474_2684 recO; DNA repair protein RecO
STM474_0506 recR; recombination protein RecR
STM474_2807 recN; recombination and repair protein
STM474_0409 rdgC; recombination associated protein
STM474_3079 cas1; crispr-associated protein Cas1
STM474_2316 yejH; putative helicase
STM474_2368 gyrA; DNA gyrase, A subunit
STM474_4013 gyrB; DNA gyrase subunit B
STM474_1731 topA; DNA topoisomerase I
STM474_4356 hupA; transcriptional regulator HU subunit alpha
STM474_0472 hupB; transcriptional regulator HU subunit beta
STM474_0995 gifsy-1 prophage RecE
STM474_2745 gifsy-1 prophage RecE
STM474_3547 fis; DNA-binding protein Fis
STM474_1343 ihfA; integration host factor subunit alpha
STM474_0968 infB; integration host factor subunit beta
STM474_4136 recQ; ATP-dependent DNA helicase RecQ
STM474_1768 hns; global DNA-binding transcriptional dual regulator H-NS
STM474_0328 dinP; DNA polymerase IV
STM474_p1054 umuC; mutagenesis protein
STM474_2029 umuC; DNA polymerase V subunit UmuC
STM474_p1053 samA; mutagenesis protein
STM474_2030 umuD; DNA polymerase V subunit UmuD
STM474_2323 DNA polymerase V subunit
STM474_4431 lexA; LexA repressor
STM474_0101 polB; DNA polymerase II
STM474_1158 dinI; DNA damage-inducible protein I, inhibits UmuD processing
STM474_1008 putative DinI-like DNA damage-inducible protein
STM474_2733 putative damage-inducible protein
STM474_2851 Prophage protein
STM474_2966 recX; recombination regulator RecX
STM474_p1058 putative cytoplasmic protein
STM474_3676 putative cytoplasmic protein
STM474_4090 rep; ATP-dependent DNA helicase Rep
STM474_1067 helD; DNA helicase IV
STM474_0847 dinG; ATP-dependent DNA helicase DinG
STM474_1843 yoaA; putative ATP-dependent helicase
STM474_2373 nrdA; ribonucleotide-diphosphate reductase subunit alpha
STM474_2945 nrdE; ribonucleotide-diphosphate reductase subunit alpha
STM474_2374 nrdB; ribonucleotide-diphosphate reductase subunit beta
STM474_2946 nrdF; ribonucleotide-diphosphate reductase subunit beta
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K19789 radD; DNA repair protein RadD
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:seb03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Salmonella enterica subsp. enterica serovar Typhimurium ST4/74