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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:sen03030]
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03410 Base excision repair [PATH:sen03410]
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 SACE_0331 nth; putative endonuclease III
SACE_6125 ung; uracil DNA glycosylase
SACE_0432 mutY; A/G-specific adenine glycosylase
SACE_5255 alkA; DNA-3-methyladenine glycosylase II
SACE_0114 mutM; formamidopyrimidine-DNA glycosylase
SACE_4713 mutM; formamidopyrimidine-DNA glycosylase
SACE_6099 mutM; formamidopyrimidine-DNA glycosylase
SACE_5875 end8; endonuclease VIII
SACE_1351 fpg-1; formamidopyrimidine-DNA glycosylase
SACE_3676 alkA1; putative ADA-like regulatory protein
SACE_1027 tag; DNA-3-methyladenine glycosylase I
SACE_6025 tagA1; probable DNA-3-methyladenine glycosylase I protein
SACE_4427 mug; G/U mismatch-specific DNA glycosylase
SACE_4189 putative DNA polymerase related protein
SACE_4190 DNA polymerase bacteriophage-type
SACE_0850 udgB; uracil-DNA glycosylase
SACE_6601 AP endonuclease, family 1:exodeoxyribonuclease III xth
SACE_3393 AP endonuclease, family 1:exodeoxyribonuclease III xth
SACE_7353 end; endonuclease IV
SACE_5437 polA; DNA polymerase I
SACE_6177 DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:sen03420]
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03430 Mismatch repair [PATH:sen03430]
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03440 Homologous recombination [PATH:sen03440]
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03450 Non-homologous end-joining [PATH:sen03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:sen03000]
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03021 Transcription machinery [BR:sen03021]
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03019 Messenger RNA biogenesis [BR:sen03019]
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03041 Spliceosome
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03011 Ribosome [BR:sen03011]
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03009 Ribosome biogenesis [BR:sen03009]
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03016 Transfer RNA biogenesis [BR:sen03016]
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03012 Translation factors [BR:sen03012]
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03110 Chaperones and folding catalysts [BR:sen03110]
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04131 Membrane trafficking [BR:sen04131]
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04121 Ubiquitin system [BR:sen04121]
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03051 Proteasome [BR:sen03051]
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03032 DNA replication proteins [BR:sen03032]
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03036 Chromosome and associated proteins [BR:sen03036]
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03400 DNA repair and recombination proteins [BR:sen03400]
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SACE_2073 ogt3; putative methylated-DNA--protein-cysteine S-methyltransferase
SACE_6024 ogt; methylated-DNA--protein-cysteine methyltransferase
SACE_4099 methylated-DNA--protein-cysteine methyltransferase
SACE_3677 ogt1; putative methylated-DNA--protein-cysteine S-methyltransferase
SACE_4097 phrB; putative deoxyribodipyrimidine photolyase
SACE_6125 ung; uracil DNA glycosylase
SACE_5255 alkA; DNA-3-methyladenine glycosylase II
SACE_0432 mutY; A/G-specific adenine glycosylase
SACE_0331 nth; putative endonuclease III
SACE_0545 ATP-dependent DNA helicase
SACE_3813 putative mutator MutT (7,8-dihydro-8-oxoguanine-triphosphatase)
SACE_0999 hypothetical protein
SACE_1133 DNA hydrolase with MutT domain
SACE_1319 NUDIX hydrolase
SACE_1052 NUDIX hydrolase
SACE_3520 hypothetical protein
SACE_6590 hypothetical protein
SACE_3199 hypothetical protein
SACE_2792 MutT-like domain protein
SACE_1041 possible MutT/NUDIX family protein
SACE_3370 alkylated DNA repair protein
SACE_4427 mug; G/U mismatch-specific DNA glycosylase
SACE_4189 putative DNA polymerase related protein
SACE_4190 DNA polymerase bacteriophage-type
SACE_0850 udgB; uracil-DNA glycosylase
SACE_3676 alkA1; putative ADA-like regulatory protein
SACE_1027 tag; DNA-3-methyladenine glycosylase I
SACE_6025 tagA1; probable DNA-3-methyladenine glycosylase I protein
SACE_0114 mutM; formamidopyrimidine-DNA glycosylase
SACE_4713 mutM; formamidopyrimidine-DNA glycosylase
SACE_6099 mutM; formamidopyrimidine-DNA glycosylase
SACE_5875 end8; endonuclease VIII
SACE_1351 fpg-1; formamidopyrimidine-DNA glycosylase
SACE_6601 AP endonuclease, family 1:exodeoxyribonuclease III xth
SACE_3393 AP endonuclease, family 1:exodeoxyribonuclease III xth
SACE_7353 end; endonuclease IV
SACE_1342 deoxyribonuclease V
SACE_6177 DNA ligase, NAD-dependent
SACE_5437 polA; DNA polymerase I
SACE_5314 uvrA; excinuclease ABC subunit A
SACE_5421 uvrB; excinuclease ABC, subunit B
SACE_2138 uvrC; nuclease subunit of the excinuclease ABC complex
SACE_6681 uvrD; putative ATP-dependent DNA helicase
SACE_1092 uvrD2; ATP-dependent DNA helicase
SACE_1078 probable ATP-dependent DNA helicase
SACE_6854 DNA-directed RNA polymerase, beta subunit
SACE_6853 DNA-directed RNA polymerase, beta' subunit
SACE_6803 DNA-directed RNA polymerase, alpha subunit
SACE_2101 DNA-directed RNA polymerase subunit omega
SACE_0826 mfd; transcription-repair coupling factor
SACE_0937 xseA; putative exodeoxyribonuclease VII large subunit
SACE_0935 xseB; putative exodeoxyribonuclease VII small subunit
SACE_2336 DNA polymerase III alpha subunit (fragment)
SACE_5815 dnaE; DNA polymerase III alpha subunit
SACE_0327 dnaN; DNA polymerase III beta subunit
SACE_0003 dnaN; DNA polymerase III beta subunit
SACE_1438 DNA polymerase III delta subunit
SACE_0379 holB; DNA polymerase III, delta' subunit
SACE_1689 DNA polymerase III, epsilon subunit
SACE_0251 putative DNA polymerase III gamma subunit
SACE_7350 ssb; single-strand DNA-binding protein
SACE_1322 single-strand binding protein
SACE_1125 ssb; putative single-strand DNA-binding protein
SACE_1556 vsr; very short patch repair protein
SACE_3353 helicase RecD/TraA
SACE_1736 recA; DNA recombination/repair
SACE_2022 ruvA; Holliday junction DNA helicase
SACE_2023 Holliday junction DNA helicase RuvB
SACE_2021 rubC; crossover junction endodeoxyribonuclease RuvC
SACE_2108 priA; primosomal protein N' (replication factor Y)
SACE_0953 sbcC; putative ATP-dependent dsDNA exonuclease
SACE_0952 sbcD; putative ATP-dependent dsDNA exonuclease
SACE_0436 radA; DNA repair protein
SACE_0005 recF; DNA replication and repair protein
SACE_6119 recG; putative ATP-dependent DNA helicase
SACE_1492 DNA repair protein RecO
SACE_0255 recR; putative recombination and repair protein
SACE_5248 recN; recombination and DNA repair protein
SACE_5100 CRISPR-associated protein Cas1/Cas4
SACE_3709 DNA binding protein, Ku-like
SACE_3550 secreted protein
SACE_7006 secreted protein
SACE_4181 ATP dependent DNA ligase
SACE_3549 DNA ligase (ATP)
SACE_2706 ATP-dependent DNA ligase
SACE_0009 gyrA; DNA gyrase subunit A
SACE_0008 gyrB; DNA gyrase subunit B
SACE_0377 topA; DNA topoisomerase I
SACE_6142 histone-like DNA binding protein
SACE_1423 ATP-dependent DNA helicase, RecQ family
SACE_3331 recQ; ATP-dependent DNA helicase
SACE_3814 dinP; DNA polymerase IV
SACE_6234 dinX; DNA polymerase IV
SACE_1760 SOS-response transcriptional repressor, LexA
SACE_2836 lexA; putative repressor of the SOS regulon
SACE_6661 putative DNA-directed DNA polymerase
SACE_6660 dnaE2; DNA polymerase III, alpha subunit, putative
SACE_1737 regulatory protein RecX
SACE_1196 dinG; probable ATP-dependent DNA helicase-related protein
SACE_1730 lhr; putative ATP-dependent DNA helicase
SACE_5126 putative ATP-dependent helicase
SACE_6141 NUDIX hydrolase
SACE_5243 nudF; ADP-ribose pyrophosphatase
SACE_6265 NUDIX hydrolase
SACE_1764 ribonucleoside diphosphate reductase,B12-dependent
SACE_1283 nrdA; ribonucleoside-diphosphate reductase, alpha subunit
SACE_0591 ribonucleoside-diphosphate reductase beta chain
SACE_1282 nrdB; ribonucleoside-diphosphate reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:sen03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Saccharopolyspora erythraea