 S0345 phoR; positive and negative sensor protein for pho regulon
S0344 phoB; positive response regulator for pho regulon
S0252 phoA; alkaline phosphatase
S4045 pstS; high-affinity phosphate-specific transport protein; periplasmic phosphate-binding protein
S1231 phoQ; sensor protein PhoQ
S1232 phoP; transcriptional regulatory protein
S4340 envZ; protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC
S4339 ompR; response regulator (sensor, EnvZ)
S2429 ompC; outer membrane protein 1b (Ib;c)
S0990 ompF; outer membrane protein 1a (Ia;b;F)
S2105 putative outer membrane pore protein
S3758 cpxA; probable sensor protein (histidine protein kinase)
S3757 cpxR; transcriptional regulator in 2-component system
S3347 yqjB; hypothetical protein
S1763 rstB; sensor histidine protein kinase, RstA regulator
S1761 rstA; response transcriptional regulatory protein (RstB sensor)
S0156 htrA; periplasmic serine protease Do, heat shock protein HtrA
S4702 creC; catabolite repression sensor kinase for PhoB, alternative sensor for pho regulon
S4701 creB; catabolic regulation response regulator
S2268 baeS; sensor protein for BaeR
S2269 baeR; transcriptional response regulatory protein (sensor BaeS)
S2266 yegO; hypothetical protein
S2267 yegB; putative transport protein
S2663 acrD; multidrug resistance protein
S3619 basS; sensor protein for BasR
S3620 basR; transcriptional regulatory protein
S2465 putative enzyme
S0479 ybcZ; putative 2-component sensor protein
S0480 ylcA; putative 2-component transcriptional regulator
S0481 ylcB; putative resistance protein
S0482 ylcC; hypothetical protein
S0490 ybdE; putative inner membrane component for iron transport
S3271 ygiY; putative 2-component sensor protein
S3270 ygiX; putative 2-component transcriptional regulator
S2031 flhC; flagellar transcriptional activator FlhC
S2062 fliC; flagellin
S2030 motA; proton conductor component of motor
S0609 kdpA; ATPase of high-affinity potassium transport system, A chain
S0611 kdpC; potassium-transporting ATPase
S1065 torR; TorCAD response regulator
S1066 torC; trimethylamine N-oxide reductase, cytochrome c-type subunit
S3468 arcB; histidine protein kinase/phosphatase, aerobic respiration sensor-response protein, sensor for arcA
S4704 arcA; negative response regulator of genes in aerobic pathways (sensors, ArcB and CpxA)
S4009 dnaA; replication initiation protein DnaA
S0502 fepA; ferrienterobactin receptor precursor
S0542 citC; citrate lyase synthetase (citrate (pro-3S)-lyase ligase
S0541 citD; citrate lyase acyl carrier protein (gamma chain)
S0540 citE; citrate lyase beta chain (acyl lyase subunit)
S0539 citF; citrate lyase alpha chain
S0538 ybdU; hypothetical protein
S0537 citG; hypothetical protein
S3632 yjdH; putative 2-component sensor protein
S3631 yjdG; putative 2-component transcriptional regulator
S3630 dcuB; anaerobic dicarboxylate transport
S1879 sfcA; NAD-linked malate dehydrogenase (malic enzyme)
S1309 narX; nitrate/nitrite sensor protein NarX
S1308 narL; nitrate/nitrite response regulator protein NarL
S2407 narP; nitrate/nitrite response regulator (sensor NarQ)
S1311 narG; nitrate reductase 1 alpha subunit
S1312 narH; nitrate reductase 1, beta subunit
S1314 narI; nitrate reductase 1, cytochrome b(NR), gamma subunit
S1313 narJ; nitrate reductase 1, delta subunit
S1884 fdnG; formate dehydrogenase-N, nitrate-inducible, alpha subunit
S1883 fdnH; formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit
S1882 fdnI; formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit
S4577 frdA; fumarate reductase, anaerobic, flavoprotein subunit
S4576 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit
S4575 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide
S4574 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide
S3974 uhpC; regulator of uhpT
S3975 uhpB; sensor histidine protein kinase, phosphorylates UhpA
S3976 uhpA; response regulator
S3973 uhpT; hexose phosphate transport protein
S0189 rcsF; exopolysaccharide synthesis regulator
S2433 rcsC; sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB
S2431 yojN; putative 2-component sensor protein
S2090 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor
S2432 rcsB; positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)
S2993 barA; sensor-regulator
S2053 uvrY; putative 2-component transcriptional regulator
S2055 sdiA; transcriptional regulator of ftsQAZ gene cluster
S2910 csrA; carbon storage regulator
S2574 evgS; putative sensor for regulator EvgA
S2573 evgA; putative positive transcription regulator (sensor EvgS)
S2572 emrK; multidrug resistance protein K
S2571 emrY; multidrug resistance protein Y
S1655 hypothetical protein
S4573 ampC; beta-lactamase
S4463 fimC; periplasmic chaperone
S1006 ycbS; putative outer membrane protein
S4048 lpfC; putative long polar fimbriae
S2296 yehB; putative outer membrane protein
S4254 probable fimbrial protein remnant
S3211 hypothetical protein
S0160 glnD; PII-uridylyltransferase
S2772 glnB; regulatory protein P-II for glutamine synthetase
S3807 glnL; histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII)
S3808 glnG; sensor glnL response regulator (nitrogen regulator I, NRI)
S3806 glnA; glutamine synthetase
S3660 hydH; sensor kinase for HydG, hydrogenase 3 activity
S3659 hydG; response regulator of hydrogenase 3 activity (sensor HydH)
S3661 yjaI; hypothetical protein
S3052 yqeF; putative acyltransferase
S4207 dctA; C4-dicarboxylate transport protein
S3460 rpoN; sigma(54 or 60) factor of RNA polymerase
S2775 yfhK; putative 2-component sensor protein
S2773 yfhA; putative 2-component transcriptional regulator
S1040 hyaA; hydrogenase-1 small subunit
S3245 putative hydrogenase subunit
S3242 hybC; hydrogenase-2 large subunit
S1041 hyaB; hydrogenase-1 large subunit
S1042 hyaC; probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit
S2024 cheR; response regulator for chemotaxis; protein glutamate methyltransferase
S4656 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
S2026 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
S1485 trg; methyl-accepting chemotaxis protein III, ribose sensor receptor
S2025 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
S2027 cheW; positive regulator of CheA protein activity
S2028 cheA; chemotaxis protein CheA
S2022 cheY; chemotaxis protein CheY
S2023 cheB; response regulator for chemotaxis (cheA sensor); protein methylesterase
S0651 gltL; ATP-binding protein of glutamate/aspartate transport system
S0650 gltK; glutamate/aspartate transport system permease
S0649 gltJ; glutamate/aspartate transport system permease
S0648 ybeJ; putative periplasmic binding transport protein
S4387 crp; cyclic AMP receptor protein
S0437 ybaS; putative glutaminase
S1696 yneH; putative glutaminase
S0577 cydA; cytochrome d terminal oxidase, polypeptide subunit I
S1046 appC; probable third cytochrome oxidase, subunit I
S0576 cydB; cytochrome d terminal oxidase polypeptide subunit II
S1047 appB; probable third cytochrome oxidase, subunit II
S3280 tolC; outer membrane channel TolC
S1052 yccZ; BexD-like protein
S2250 wza; putative polysaccharide export protein
S1051 yccY; putative phosphatase
S2249 wzb; probable protein-tyrosine-phosphatase
S2248 hypothetical protein
S3900 wecB; UDP-N-acetyl glucosamine-2-epimerase
S3899 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
S0940 ybhC; putative pectinesterase
S1155 flgM; flagellar protein FlgM
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K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K02040 pstS; phosphate transport system substrate-binding protein
K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
K07660 phoP; two-component system, OmpR family, response regulator PhoP
K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
K09475 ompC; outer membrane pore protein C
K09476 ompF; outer membrane pore protein F
K09476 ompF; outer membrane pore protein F
K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
K07662 cpxR; two-component system, OmpR family, response regulator CpxR
K25864 mzrA; modulator protein MzrA
K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
K07661 rstA; two-component system, OmpR family, response regulator RstA
K04771 degP; serine protease Do [EC:3.4.21.107]
K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
K07664 baeR; two-component system, OmpR family, response regulator BaeR
K07789 mdtC; multidrug efflux pump
K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
K18324 acrD; multidrug efflux pump
K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
K07771 basR; two-component system, OmpR family, response regulator BasR
K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
K07796 cusC; outer membrane protein, copper/silver efflux system
K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
K07787 cusA; copper/silver efflux system protein
K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
K07666 qseB; two-component system, OmpR family, response regulator QseB
K02402 flhC; flagellar transcriptional activator FlhC
K02406 fliC; flagellin
K02556 motA; chemotaxis protein MotA
K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
K01548 kdpC; potassium-transporting ATPase KdpC subunit
K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
K02313 dnaA; chromosomal replication initiator protein
K19611 fepA; ferric enterobactin receptor
K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
K05964 citX; holo-ACP synthase [EC:2.7.7.61]
K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
K07703 dcuR; two-component system, CitB family, response regulator DcuR
K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
K08349 fdnH; formate dehydrogenase-N, beta subunit
K08350 fdnI; formate dehydrogenase-N, gamma subunit
K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
K00246 frdC; succinate dehydrogenase subunit C
K00247 frdD; succinate dehydrogenase subunit D
K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
K06080 rcsF; RcsF protein
K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
K03563 csrA; carbon storage regulator
K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
K07690 evgA; two-component system, NarL family, response regulator EvgA
K07797 emrK; multidrug resistance protein K
K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
K23236 safA; two-component-system connector protein SafA
K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
K07346 fimC; fimbrial chaperone protein
K07347 fimD; outer membrane usher protein
K07347 fimD; outer membrane usher protein
K07347 fimD; outer membrane usher protein
K07347 fimD; outer membrane usher protein
K02651 flp; pilus assembly protein Flp/PilA
K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
K04751 glnB; nitrogen regulatory protein P-II 1
K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
K07713 zraR; two-component system, NtrC family, response regulator HydG
K07803 zraP; zinc resistance-associated protein
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K11103 dctA; aerobic C4-dicarboxylate transport protein
K03092 rpoN; RNA polymerase sigma-54 factor
K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
K07715 glrR; two-component system, NtrC family, response regulator GlrR
K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
K03408 cheW; purine-binding chemotaxis protein CheW
K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
K10002 gltK; glutamate/aspartate transport system permease protein
K10003 gltJ; glutamate/aspartate transport system permease protein
K10001 gltI; glutamate/aspartate transport system substrate-binding protein
K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
K01425 glsA; glutaminase [EC:3.5.1.2]
K01425 glsA; glutaminase [EC:3.5.1.2]
K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
K12340 tolC; outer membrane protein
K01991 wza; polysaccharide biosynthesis/export protein
K01991 wza; polysaccharide biosynthesis/export protein
K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
K02398 flgM; negative regulator of flagellin synthesis FlgM
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KEGG Orthology (KO) - Shigella flexneri 2457T (serotype 2a)