KEGG Orthology (KO) - Shewanella sp. MR-7

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
     00250 Alanine, aspartate and glutamate metabolism [PATH:shm00250]
     00260 Glycine, serine and threonine metabolism [PATH:shm00260]
     00270 Cysteine and methionine metabolism [PATH:shm00270]
       Shewmr7_1817 serine O-acetyltransferase
       Shewmr7_1567 cysteine synthase
       Shewmr7_2281 cystathionine beta-lyase
       Shewmr7_3184 methionine synthase (B12-dependent)
       Shewmr7_0654 methionine synthase (B12-independent)
       Shewmr7_3251 methionine adenosyltransferase
       Shewmr7_1633 S-adenosylmethionine decarboxylase
       Shewmr7_0860 Spermidine synthase
       Shewmr7_2956 methylthioadenosine nucleosidase
       Shewmr7_3073 protein of unknown function DUF152
       Shewmr7_0085 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
       Shewmr7_1955 aminotransferase
       Shewmr7_2545 methionine gamma-lyase
       Shewmr7_1746 putative GAF sensor protein
       Shewmr7_0972 quorum-sensing autoinducer 2 (AI-2), LuxS
       Shewmr7_2351 conserved hypothetical protein
       Shewmr7_1199 aspartate kinase
       Shewmr7_3369 aspartate kinase
       Shewmr7_1209 aspartate kinase / homoserine dehydrogenase
       Shewmr7_0513 aspartate kinase / homoserine dehydrogenase
       Shewmr7_1489 aspartate semialdehyde dehydrogenase
       Shewmr7_2665 homoserine O-succinyltransferase
       Shewmr7_0512 cystathionine gamma-synthase
       Shewmr7_0966 O-acetylhomoserine/O-acetylserine sulfhydrylase
       Shewmr7_0310 branched chain amino acid aminotransferase
       Shewmr7_3062 glutamate-cysteine ligase
       Shewmr7_3333 glutathione synthase
       Shewmr7_2057 aminotransferase
       Shewmr7_3006 3-mercaptopyruvate sulfurtransferase
       Shewmr7_0614 malate dehydrogenase (NAD)
       Shewmr7_1804 L-serine ammonia-lyase
       Shewmr7_3091 cysteine synthase B
       Shewmr7_3304 D-3-phosphoglycerate dehydrogenase
       Shewmr7_2058 phosphoserine aminotransferase
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
K00797 speE; spermidine synthase [EC:2.5.1.16]
K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
K00928 lysC; aspartate kinase [EC:2.7.2.4]
K00928 lysC; aspartate kinase [EC:2.7.2.4]
K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
K01920 gshB; glutathione synthase [EC:6.3.2.3]
K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
     00280 Valine, leucine and isoleucine degradation [PATH:shm00280]
     00290 Valine, leucine and isoleucine biosynthesis [PATH:shm00290]
     00300 Lysine biosynthesis [PATH:shm00300]
     00310 Lysine degradation [PATH:shm00310]
     00220 Arginine biosynthesis [PATH:shm00220]
     00330 Arginine and proline metabolism [PATH:shm00330]
     00340 Histidine metabolism [PATH:shm00340]
     00350 Tyrosine metabolism [PATH:shm00350]
     00360 Phenylalanine metabolism [PATH:shm00360]
     00380 Tryptophan metabolism [PATH:shm00380]
     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:shm00400]
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:shm00410]
     00430 Taurine and hypotaurine metabolism [PATH:shm00430]
     00440 Phosphonate and phosphinate metabolism
     00450 Selenocompound metabolism [PATH:shm00450]
       Shewmr7_0512 cystathionine gamma-synthase
       Shewmr7_2281 cystathionine beta-lyase
       Shewmr7_3184 methionine synthase (B12-dependent)
       Shewmr7_0654 methionine synthase (B12-independent)
       Shewmr7_2545 methionine gamma-lyase
       Shewmr7_0836 cysteine desulfurase
       Shewmr7_2017 thioredoxin reductase
       Shewmr7_0901 sulfate adenylyltransferase subunit 1
       Shewmr7_0900 sulfate adenylyltransferase subunit 2
       Shewmr7_0170 selenophosphate synthase
       Shewmr7_0101 L-seryl-tRNA(Sec) selenium transferase
       Shewmr7_1730 methionyl-tRNA synthetase
K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
     00460 Cyanoamino acid metabolism [PATH:shm00460]
     00470 D-Amino acid metabolism [PATH:shm00470]
     00480 Glutathione metabolism [PATH:shm00480]
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
     00730 Thiamine metabolism [PATH:shm00730]
     00740 Riboflavin metabolism [PATH:shm00740]
     00750 Vitamin B6 metabolism [PATH:shm00750]
     00760 Nicotinate and nicotinamide metabolism [PATH:shm00760]
     00770 Pantothenate and CoA biosynthesis [PATH:shm00770]
     00780 Biotin metabolism [PATH:shm00780]
     00785 Lipoic acid metabolism [PATH:shm00785]
     00790 Folate biosynthesis [PATH:shm00790]
     00670 One carbon pool by folate [PATH:shm00670]
       Shewmr7_3120 dihydrofolate reductase
       Shewmr7_0616 short-chain dehydrogenase/reductase SDR
       Shewmr7_3469 Formate-tetrahydrofolate ligase
       Shewmr7_2565 Methenyltetrahydrofolate cyclohydrolase
       Shewmr7_1160 serine hydroxymethyltransferase
       Shewmr7_2453 phosphoribosylglycinamide formyltransferase
       Shewmr7_3584 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
       Shewmr7_0026 methionyl-tRNA formyltransferase
       Shewmr7_0622 glycine cleavage system T protein
       Shewmr7_3184 methionine synthase (B12-dependent)
       Shewmr7_2943 thymidylate synthase
       Shewmr7_2714 formyltetrahydrofolate deformylase
       Shewmr7_0514 5,10-methylenetetrahydrofolate reductase
       Shewmr7_0617 5-formyltetrahydrofolate cyclo-ligase
K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
K00560 thyA; thymidylate synthase [EC:2.1.1.45]
K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
     00830 Retinol metabolism
     00860 Porphyrin metabolism [PATH:shm00860]
     00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:shm00130]
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
   09151 Immune system
 
   09152 Endocrine system
 
   09153 Circulatory system
 
   09154 Digestive system
     04970 Salivary secretion
     04971 Gastric acid secretion
     04972 Pancreatic secretion
     04976 Bile secretion
     04973 Carbohydrate digestion and absorption
     04974 Protein digestion and absorption
     04975 Fat digestion and absorption
     04979 Cholesterol metabolism
     04977 Vitamin digestion and absorption
     04980 Cobalamin transport and metabolism
       Shewmr7_3184 methionine synthase (B12-dependent)
K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
     04978 Mineral absorption
 
   09155 Excretory system
 
   09156 Nervous system
 
   09157 Sensory system
 
   09158 Development and regeneration
 
   09149 Aging
 
   09159 Environmental adaptation
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
 09190 Not Included in Pathway or Brite

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Last updated: April 16, 2024