KEGG Orthology (KO) - Streptococcus infantarius subsp. infantarius

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:sif03030]
     03410 Base excision repair [PATH:sif03410]
     03420 Nucleotide excision repair [PATH:sif03420]
     03430 Mismatch repair [PATH:sif03430]
     03440 Homologous recombination [PATH:sif03440]
       Sinf_0638 recJ; single-stranded-DNA-specific exonuclease RecJ
       Sinf_0116 ssbB; single-strand DNA-binding protein
       Sinf_1635 ssbA; single-strand DNA-binding protein
       Sinf_1797 Single-stranded DNA-binding protein
       Sinf_1953 recF; recombination protein RecF
       Sinf_0023 recO; DNA repair and homologous recombination RecO
       Sinf_0527 recR; recombination protein RecR
       Sinf_1892 recA; recombination protein A
       Sinf_1851 polA; DNA polymerase I
       Sinf_1897 ruvA; Holliday junction DNA helicase
       Sinf_0039 ruvB; Holliday junction DNA helicase RuvB
       Sinf_1611 recG; ATP-dependent DNA helicase RecG
       Sinf_1661 exo-deoxyribonuclease V alpha subunit
       Sinf_0753 dnaE; DNA polymerase III, subunit alpha
       Sinf_0215 polC; DNA polymerase III (alpha subunit)
       Sinf_0002 dnaN; DNA polymerase III (beta subunit)
       Sinf_0597 dnaX; DNA polymerase III, gamma and tau subunits
       Sinf_0546 DNA polymerase III delta subunit
       Sinf_1482 holB; DNA polymerase III delta' subunit
       Sinf_1686 DNA polymerase III epsilon subunit
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:sif03000]
     03021 Transcription machinery [BR:sif03021]
     03019 Messenger RNA biogenesis [BR:sif03019]
     03041 Spliceosome
     03011 Ribosome [BR:sif03011]
     03009 Ribosome biogenesis [BR:sif03009]
     03016 Transfer RNA biogenesis [BR:sif03016]
     03012 Translation factors [BR:sif03012]
     03110 Chaperones and folding catalysts [BR:sif03110]
     04131 Membrane trafficking [BR:sif04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:sif03032]
     03036 Chromosome and associated proteins [BR:sif03036]
     03400 DNA repair and recombination proteins [BR:sif03400]
       Sinf_0738 ung; uracil-DNA glycosylase
       Sinf_1643 mutY; A/G-specific adenine glycosylase
       Sinf_0643 nth; endonuclease III (DNA repair)
       Sinf_0491 NTP pyrophosphohydrolase including oxidative damage repair enzyme
       Sinf_0649 mutX; mutator MutT protein
       Sinf_1215 NTP pyrophosphohydrolase, MutT/nudix family protein
       Sinf_1399 MutT/NudX family protein (putative)
       Sinf_1832 dut; Deoxy UTP pyrophosphatase (dUTPase)
       Sinf_1896 tag; DNA-3-methyladenine glycosylase I
       Sinf_1439 mutM; formamido pyrimidine-DNA glycosylase
       Sinf_1472 exoA; exodeoxyribonuclease
       Sinf_0638 recJ; single-stranded-DNA-specific exonuclease RecJ
       Sinf_0608 ligA; DNA ligase (NAD-dependent)
       Sinf_1851 polA; DNA polymerase I
       Sinf_1628 uvrA; excinuclease ABC
       Sinf_1216 uvrB; excinuclease ABC (subunit B)
       Sinf_0694 uvrC; excinuclease ABC (subunit C)
       Sinf_1020 pcrA; ATP-dependent DNA helicase PcrA
       Sinf_0918 hypothetical protein
       Sinf_0094 rpoB; DNA-directed RNA polymerase beta subunit
       Sinf_0095 rpoC; RNA polymerase (beta' subunit)
       Sinf_0072 rpoA; RNA polymerase (alpha subunit)
       Sinf_0280 rpoE; RNA polymerase (delta subunit)
       Sinf_0399 rpoZ; DNA-directed RNA polymerase omega chain
       Sinf_0008 mfd; transcription repair coupling factor
       Sinf_1899 mutS; DNA Mismatch repair ATPase (MutS family)
       Sinf_1656 mutS2; Mismatch repair ATPase (MutS family)
       Sinf_1898 mutL; DNA mismatch repair protein mutL
       Sinf_0508 xseA; exodeoxyribonuclease VII large subunit
       Sinf_0509 xseB; exodeoxyribonuclease VII small subunit
       Sinf_0753 dnaE; DNA polymerase III, subunit alpha
       Sinf_0215 polC; DNA polymerase III (alpha subunit)
       Sinf_0002 dnaN; DNA polymerase III (beta subunit)
       Sinf_0546 DNA polymerase III delta subunit
       Sinf_1482 holB; DNA polymerase III delta' subunit
       Sinf_1686 DNA polymerase III epsilon subunit
       Sinf_0597 dnaX; DNA polymerase III, gamma and tau subunits
       Sinf_0116 ssbB; single-strand DNA-binding protein
       Sinf_1635 ssbA; single-strand DNA-binding protein
       Sinf_1797 Single-stranded DNA-binding protein
       Sinf_1661 exo-deoxyribonuclease V alpha subunit
       Sinf_1892 recA; recombination protein A
       Sinf_1897 ruvA; Holliday junction DNA helicase
       Sinf_0039 ruvB; Holliday junction DNA helicase RuvB
       Sinf_1831 radA; DNA repair protein RadA
       Sinf_1953 recF; recombination protein RecF
       Sinf_1611 recG; ATP-dependent DNA helicase RecG
       Sinf_0023 recO; DNA repair and homologous recombination RecO
       Sinf_0527 recR; recombination protein RecR
       Sinf_0513 recN; DNA repair and genetic recombination proteinRecN
       Sinf_0390 recU; recombination protein RecU
       Sinf_0627 rexA; ATP-dependent deoxyribonuclease (subunit A)
       Sinf_0626 rexB; ATP-dependent deoxyribonuclease (subunit B)
       Sinf_1254 CRISPR-associated protein Cas1
       Sinf_0969 gyrA; DNA gyrase A subunit
       Sinf_1283 gyrB; DNA gyrase subunit B
       Sinf_0909 topA; DNA topoisomerase I
       Sinf_0517 hup; DNA-binding protein HU
       Sinf_0776 Recombinational DNA repair protein RecT (prophage associated)
       Sinf_1663 dinP; DNA polymerase IV
       Sinf_0886 ImpB/MucB/SamB family protein
       Sinf_0922 ImpB/MucB/SamB family protein
       Sinf_0884 Pleiotropic regulator of exopolysaccharide synthesis, competence and biofilm formation Ftr, XRE family
       Sinf_0900 transcriptional regulator
       Sinf_0418 recX; RecA regulator RecX
       Sinf_1317 DnaQ family exonuclease/DinG family helicase
       Sinf_0578 nrdE; ribonucleoside-diphosphate reductase(major subunit)
       Sinf_0577 nrdF; ribonucleoside-diphosphate reductase (minor subunit)
       Sinf_1297 Exopolyphosphatase-related protein
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:sif03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: March 26, 2024