TM1040_3333 Thiosulphate-binding protein
       TM1040_3332 Sulfate ABC transporter permease protein CysT
       TM1040_3331 Sulfate ABC transporter permease protein CysW
       TM1040_3330 ABC transporter-related protein
       TM1040_0612 adenylylsulfate kinase / sulfate adenylyltransferase
       TM1040_0013 3'(2')5'-bisphosphate nucleotidase
       TM1040_1759 cysH; phosphoadenylylsulfate reductase (thioredoxin)
       TM1040_1758 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin-like protein
       TM1040_2634 3-mercaptopyruvate sulfurtransferase
       TM1040_0510 serine O-acetyltransferase
       TM1040_1075 serine O-acetyltransferase
       TM1040_1439 cysK; cysteine synthase
       TM1040_1379 homoserine O-succinyltransferase
       TM1040_1938 O-succinylhomoserine sulfhydrylase
       TM1040_1444 aminomethyltransferase
       TM1040_1565 AMP-dependent synthetase and ligase
       TM1040_1170 AMP-dependent synthetase and ligase
       TM1040_1557 acyl-CoA dehydrogenase-like protein
       TM1040_3059 acyl-CoA dehydrogenase-like protein

K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
K02046 cysU; sulfate/thiosulfate transport system permease protein
K02047 cysW; sulfate/thiosulfate transport system permease protein
K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
K17486 dmdA; dimethylsulfoniopropionate demethylase [EC:2.1.1.269]
K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]

       TM1040_2631 ribonuclease T2
       TM1040_1133 gltX2; glutamyl-tRNA synthetase
       TM1040_2275 glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase
       TM1040_1852 prolyl-tRNA synthetase
       TM1040_2389 Isoleucyl-tRNA synthetase
       TM1040_0045 leucyl-tRNA synthetase
       TM1040_2197 methionyl-tRNA synthetase
       TM1040_0903 arginyl-tRNA synthetase
       TM1040_0635 aspartyl-tRNA synthetase
       TM1040_1232 alanyl-tRNA synthetase
       TM1040_1721 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
       TM1040_0994 seryl-tRNA synthetase
       TM1040_1153 cysteinyl-tRNA synthetase
       TM1040_1706 valyl-tRNA synthetase
       TM1040_0503 histidyl-tRNA synthetase
       TM1040_2511 phenylalanyl-tRNA synthetase, alpha subunit
       TM1040_3623 phenylalanyl-tRNA synthetase beta subunit
       TM1040_0923 tyrosyl-tRNA synthetase
       TM1040_0443 tryptophanyl-tRNA synthetase
       TM1040_1819 D-tyrosyl-tRNA(Tyr) deacylase
       TM1040_2290 histidine triad (HIT) protein
       TM1040_0195 tRNA (guanine-N(7)-)-methyltransferase
       TM1040_2384 Pseudouridylate synthase
       TM1040_0084 tRNA pseudouridine synthase B
       TM1040_1241 aminotransferase class V
       TM1040_3060 Sua5/YciO/YrdC/YwlC
       TM1040_1415 tRNA delta(2)-isopentenylpyrophosphate transferase
       TM1040_2864 tRNA modification GTPase trmE
       TM1040_2865 gidA; Glucose inhibited division protein A
       TM1040_1544 AIR synthase related protein-like protein
       TM1040_0013 3'(2')5'-bisphosphate nucleotidase
       TM1040_0312 ribonuclease P protein component
       TM1040_R0032 rnpB; RNA component of RNaseP
       TM1040_2872 rph; RNAse PH
       TM1040_1474 ribonuclease D
       TM1040_0027 3'-5' exonuclease
       TM1040_2261 lysyl-tRNA synthetase
       TM1040_2312 Glycine--tRNA ligase
       TM1040_2310 Glycine--tRNA ligase
       TM1040_1393 glutamyl-tRNA synthetase class Ic
       TM1040_2601 Ala-tRNA(Pro) hydrolase
       TM1040_1926 CMP/dCMP deaminase zinc-binding
       TM1040_0964 TIM-barrel protein yjbN family
       TM1040_1363 Dihydrouridine synthase TIM-barrel protein nifR3
       TM1040_0185 tRNA-i(6)A37 thiotransferase enzyme MiaB
       TM1040_2810 MiaB-like tRNA modifying enzyme
       TM1040_1336 RNA methyltransferase TrmH group 1
       TM1040_1391 gid protein
       TM1040_2611 tRNA (Guanine37-N(1)-) methyltransferase
       TM1040_0072 ribosomal large subunit pseudouridine synthase A
       TM1040_1401 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
       TM1040_0309 PP-loop
       TM1040_1458 SirA-like protein
       TM1040_0765 HesB/YadR/YfhF
       TM1040_1985 glycine cleavage T protein (aminomethyl transferase)
       TM1040_1093 Queuosine biosynthesis protein
       TM1040_2047 ExsB
       TM1040_2046 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
       TM1040_2045 Radical SAM
       TM1040_2044 GTP cyclohydrolase I
       TM1040_2806 Domain of unknown function DUF1730
       TM1040_1545 Rhodanese-like protein
       TM1040_0770 queuine tRNA-ribosyltransferase
       TM1040_2362 tRNA(Ile)-lysidine synthetase-like protein
       TM1040_3092 peptidase M22 glycoprotease
       TM1040_2829 O-sialoglycoprotein endopeptidase
       TM1040_2842 protein of unknown function UPF0079
       TM1040_2994 RNAse R
       TM1040_0078 pnp; polyribonucleotide nucleotidyltransferase

K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K01978 rnpB; M1 RNA
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]