KEGG Orthology (KO) - Shewanella loihica

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
     00010 Glycolysis / Gluconeogenesis [PATH:slo00010]
     00020 Citrate cycle (TCA cycle) [PATH:slo00020]
     00030 Pentose phosphate pathway [PATH:slo00030]
     00040 Pentose and glucuronate interconversions [PATH:slo00040]
     00051 Fructose and mannose metabolism [PATH:slo00051]
     00052 Galactose metabolism [PATH:slo00052]
     00053 Ascorbate and aldarate metabolism
     00500 Starch and sucrose metabolism [PATH:slo00500]
     00520 Amino sugar and nucleotide sugar metabolism [PATH:slo00520]
       Shew_1626 glycoside hydrolase, family 3 domain protein
       Shew_1115 beta-N-acetylhexosaminidase
       Shew_1864 PTS system, glucose subfamily, IIA subunit
       Shew_1117 N-acetylglucosamine 6-phosphate deacetylase
       Shew_0815 glucosamine-6-phosphate isomerase
       Shew_1116 ATPase, BadF/BadG/BcrA/BcrD type
       Shew_1428 N-acetylglucosamine kinase
       Shew_3839 glutamine--fructose-6-phosphate transaminase
       Shew_2832 phosphoglucosamine mutase
       Shew_3842 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase
       Shew_1020 protein of unknown function UPF0075
       Shew_1947 HAD-superfamily hydrolase, subfamily IA, variant 1
       Shew_0883 aminoglycoside phosphotransferase
       Shew_0884 Nucleotidyl transferase
       Shew_3298 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       Shew_0141 UDP-N-acetylmuramate dehydrogenase
       Shew_1318 polysaccharide biosynthesis protein CapD
       Shew_2641 PTS system, glucose-like IIB subunint
       Shew_1922 phosphoglucomutase, alpha-D-glucose phosphate-specific
       Shew_1434 UDP-glucose pyrophosphorylase
       Shew_1418 UDP-glucose pyrophosphorylase
       Shew_2287 galactokinase
       Shew_3271 galactokinase
       Shew_2288 UDP-glucose-hexose-1-phosphate uridylyltransferase / UTP-hexose-1-phosphate uridylyltransferase
       Shew_1433 UDP-galactose 4-epimerase
       Shew_2285 UDP-galactose 4-epimerase
       Shew_3111 NAD-dependent epimerase/dehydratase
       Shew_1088 glucose-6-phosphate isomerase
       Shew_2544 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
       Shew_1171 glucose-1-phosphate adenylyltransferase
K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
K18676 gspK; glucosamine kinase [EC:2.7.1.8]
K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
K00849 galK; galactokinase [EC:2.7.1.6]
K00849 galK; galactokinase [EC:2.7.1.6]
K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
K01840 manB; phosphomannomutase [EC:5.4.2.8]
K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
     00620 Pyruvate metabolism [PATH:slo00620]
     00630 Glyoxylate and dicarboxylate metabolism [PATH:slo00630]
     00640 Propanoate metabolism [PATH:slo00640]
     00650 Butanoate metabolism [PATH:slo00650]
     00660 C5-Branched dibasic acid metabolism [PATH:slo00660]
     00562 Inositol phosphate metabolism [PATH:slo00562]
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
     00061 Fatty acid biosynthesis [PATH:slo00061]
     00062 Fatty acid elongation
     00071 Fatty acid degradation [PATH:slo00071]
     00073 Cutin, suberine and wax biosynthesis
     00100 Steroid biosynthesis
     00120 Primary bile acid biosynthesis
     00121 Secondary bile acid biosynthesis
     00140 Steroid hormone biosynthesis
     00561 Glycerolipid metabolism [PATH:slo00561]
     00564 Glycerophospholipid metabolism [PATH:slo00564]
     00565 Ether lipid metabolism [PATH:slo00565]
     00600 Sphingolipid metabolism [PATH:slo00600]
       Shew_3269 Beta-galactosidase
       Shew_1115 beta-N-acetylhexosaminidase
K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
     00590 Arachidonic acid metabolism [PATH:slo00590]
     00591 Linoleic acid metabolism
     00592 alpha-Linolenic acid metabolism [PATH:slo00592]
     01040 Biosynthesis of unsaturated fatty acids [PATH:slo01040]
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00511 Other glycan degradation [PATH:slo00511]
       Shew_3269 Beta-galactosidase
       Shew_1115 beta-N-acetylhexosaminidase
K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
     00540 Lipopolysaccharide biosynthesis [PATH:slo00540]
     00542 O-Antigen repeat unit biosynthesis [PATH:slo00542]
     00541 O-Antigen nucleotide sugar biosynthesis [PATH:slo00541]
     00550 Peptidoglycan biosynthesis [PATH:slo00550]
     00552 Teichoic acid biosynthesis [PATH:slo00552]
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
     00543 Exopolysaccharide biosynthesis [PATH:slo00543]
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:slo03000]
     03021 Transcription machinery [BR:slo03021]
     03019 Messenger RNA biogenesis [BR:slo03019]
     03041 Spliceosome
     03011 Ribosome [BR:slo03011]
     03009 Ribosome biogenesis [BR:slo03009]
     03016 Transfer RNA biogenesis [BR:slo03016]
     03012 Translation factors [BR:slo03012]
     03110 Chaperones and folding catalysts [BR:slo03110]
       Shew_1566 ATP-dependent Clp protease, ATP-binding subunit clpA
       Shew_2948 ATPase AAA-2 domain protein
       Shew_2507 ATP-dependent Clp protease, ATP-binding subunit ClpX
       Shew_0374 heat shock protein HslVU, ATPase subunit HslU
       Shew_2232 heat shock protein Hsp90
       Shew_2844 chaperone protein DnaK
       Shew_2313 Fe-S protein assembly chaperone HscA
       Shew_1787 conserved hypothetical protein
       Shew_0472 chaperonin GroEL
       Shew_2843 chaperone protein DnaJ
       Shew_0885 heat shock protein DnaJ domain protein
       Shew_2314 co-chaperone Hsc20
       Shew_3622 Hsp33 protein
       Shew_2772 GrpE protein
       Shew_0296 heat shock protein Hsp20
       Shew_2134 heat shock protein Hsp20
       Shew_3621 RNA-binding S4 domain protein
       Shew_0471 chaperonin Cpn10
       Shew_2834 membrane protease FtsH catalytic subunit
       Shew_3851 ATP synthase F0, A subunit
       Shew_3804 protein translocase subunit secB
       Shew_3569 protein of unknown function, Spy-related
       Shew_0541 protein of unknown function DUF461
       Shew_3332 protein of unknown function DUF461
       Shew_1755 hydrogenase expression/synthesis, HypA
       Shew_1759 hydrogenase accessory protein HypB
       Shew_2799 cytoplasmic chaperone TorD family protein
       Shew_0240 cytoplasmic chaperone TorD family protein
       Shew_2443 peptidase S8 and S53, subtilisin, kexin, sedolisin
       Shew_2209 peptidase S8 and S53, subtilisin, kexin, sedolisin
       Shew_3021 Endonuclease I
       Shew_0781 peptidase S8 and S53, subtilisin, kexin, sedolisin
       Shew_1115 beta-N-acetylhexosaminidase
       Shew_2890 peptidyl-prolyl cis-trans isomerase, cyclophilin type
       Shew_0827 peptidyl-prolyl cis-trans isomerase, cyclophilin type
       Shew_2512 Peptidylprolyl isomerase
       Shew_2504 PpiC-type peptidyl-prolyl cis-trans isomerase
       Shew_0840 peptidylprolyl isomerase, FKBP-type
       Shew_0350 peptidylprolyl isomerase, FKBP-type
       Shew_2841 peptidylprolyl isomerase, FKBP-type
       Shew_1101 peptidylprolyl isomerase, FKBP-type
       Shew_2139 peptidylprolyl isomerase, FKBP-type
       Shew_1078 peptidylprolyl isomerase, FKBP-type
       Shew_3008 PpiC-type peptidyl-prolyl cis-trans isomerase
       Shew_2470 PpiC-type peptidyl-prolyl cis-trans isomerase
       Shew_0881 PpiC-type peptidyl-prolyl cis-trans isomerase
       Shew_0338 thioredoxin
       Shew_0503 thioredoxin domain protein
       Shew_2231 thioredoxin domain protein
       Shew_1531 Glutaredoxin, GrxA family
       Shew_1835 glutaredoxin-like protein
       Shew_2373 DSBA oxidoreductase
       Shew_0265 DSBA oxidoreductase
       Shew_2176 Disulphide bond formation protein DsbB
       Shew_0771 thiol:disulfide interchange protein DsbC
       Shew_3266 Protein-disulfide reductase
       Shew_0194 periplasmic protein thiol--disulphide oxidoreductase DsbE
K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
K04079 HSP90A; molecular chaperone HtpG
K04043 dnaK; molecular chaperone DnaK
K04044 hscA; molecular chaperone HscA
K04046 yegD; hypothetical chaperone protein
K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
K03686 dnaJ; molecular chaperone DnaJ
K05801 djlA; DnaJ like chaperone protein
K04082 hscB; molecular chaperone HscB
K04083 hslO; molecular chaperone Hsp33
K03687 GRPE; molecular chaperone GrpE
K13993 HSP20; HSP20 family protein
K04080 ibpA; molecular chaperone IbpA
K04762 hslR; ribosome-associated heat shock protein Hsp15
K04078 groES; chaperonin GroES
K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
K02108 ATPF0A; F-type H+-transporting ATPase subunit a
K03071 secB; preprotein translocase subunit SecB
K06006 cpxP; periplasmic protein CpxP/Spy
K09796 pccA; periplasmic copper chaperone A
K09796 pccA; periplasmic copper chaperone A
K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
K04652 hypB; hydrogenase nickel incorporation protein HypB
K03533 torD; TorA specific chaperone
K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
K14645 K14645; serine protease [EC:3.4.21.-]
K14645 K14645; serine protease [EC:3.4.21.-]
K14645 K14645; serine protease [EC:3.4.21.-]
K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
K03671 TXN; thioredoxin
K03671 TXN; thioredoxin
K05838 ybbN; putative thioredoxin
K03674 grxA; glutaredoxin 1
K07390 grxD; monothiol glutaredoxin
K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
     04131 Membrane trafficking [BR:slo04131]
     04121 Ubiquitin system [BR:slo04121]
     03051 Proteasome [BR:slo03051]
     03032 DNA replication proteins [BR:slo03032]
     03036 Chromosome and associated proteins [BR:slo03036]
     03400 DNA repair and recombination proteins [BR:slo03400]
     03029 Mitochondrial biogenesis [BR:slo03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 23, 2024