KEGG Orthology (KO) - Streptococcus pneumoniae 670-6B (serotype 6B)

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:snb03030]
     03410 Base excision repair [PATH:snb03410]
     03420 Nucleotide excision repair [PATH:snb03420]
     03430 Mismatch repair [PATH:snb03430]
     03440 Homologous recombination [PATH:snb03440]
       SP670_0670 recJ; single-stranded-DNA-specific exonuclease RecJ
       SP670_1623 single-stranded DNA-binding protein
       SP670_2172 single-strand binding protein family
       SP670_1988 single-strand binding protein family
       SP670_2371 DNA replication and repair protein RecF
       SP670_0113 recO; DNA repair protein RecO
       SP670_1759 recR; recombination protein RecR
       SP670_2026 recA; protein RecA
       SP670_0108 DNA polymerase I
       SP670_0257 ruvA; holliday junction DNA helicase RuvA
       SP670_0332 ruvB; holliday junction DNA helicase RuvB
       SP670_1788 recG; ATP-dependent DNA helicase RecG
       SP670_0473 helicase, RecD/TraA family
       SP670_1426 DNA polymerase III subunit alpha
       SP670_0346 polC; DNA polymerase III, alpha subunit, Gram-positive type
       SP670_0002 dnaN; DNA polymerase III, beta subunit
       SP670_1459 DNA polymerase III subunit gamma/tau
       SP670_1561 holA; DNA polymerase III, delta subunit
       SP670_1385 DNA polymerase III subunit delta
       SP670_1327 DNA polymerase III subunit epsilon
       SP670_1829 primosomal protein N'
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:snb03000]
     03021 Transcription machinery [BR:snb03021]
     03019 Messenger RNA biogenesis [BR:snb03019]
     03041 Spliceosome
     03011 Ribosome [BR:snb03011]
     03009 Ribosome biogenesis [BR:snb03009]
     03016 Transfer RNA biogenesis [BR:snb03016]
     03012 Translation factors [BR:snb03012]
     03110 Chaperones and folding catalysts [BR:snb03110]
     04131 Membrane trafficking [BR:snb04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:snb03032]
     03036 Chromosome and associated proteins [BR:snb03036]
     03400 DNA repair and recombination proteins [BR:snb03400]
       SP670_0833 O6-methylguanine-DNA methyltransferase
       SP670_1104 ung; uracil-DNA glycosylase
       SP670_1052 mutY; A/G-specific adenine glycosylase
       SP670_0996 nth; endonuclease III
       SP670_1105 mutator MutT protein
       SP670_1507 MutT/nudix family protein
       SP670_1044 hydrolase, nudix family
       SP670_1583 MutT/nudix family protein
       SP670_1864 7,8-dihydro-8-oxoguanine-triphosphatase
       SP670_0100 deoxyuridine 5'-triphosphate nucleotidohydrolase
       SP670_0258 DNA-3-methyladenine glycosylase 1
       SP670_1349 mutM; formamidopyrimidine-DNA glycosylase
       SP670_1918 xth; exodeoxyribonuclease III
       SP670_0670 recJ; single-stranded-DNA-specific exonuclease RecJ
       SP670_1222 ligA; DNA ligase, NAD-dependent
       SP670_0108 DNA polymerase I
       SP670_0263 uvrA; excinuclease ABC, A subunit
       SP670_0676 uvrC; excinuclease ABC, C subunit
       SP670_1251 pcrA; ATP-dependent DNA helicase PcrA
       SP670_1123 UvrD/REP helicase family protein
       SP670_2040 rpoB; DNA-directed RNA polymerase, beta subunit
       SP670_2039 rpoC; DNA-directed RNA polymerase, beta' subunit
       SP670_0308 rpoA; DNA-directed RNA polymerase, alpha subunit
       SP670_0570 rpoE; DNA-directed RNA polymerase, delta subunit
       SP670_1830 DNA-directed RNA polymerase omega chain
       SP670_0029 mfd; transcription-repair coupling factor
       SP670_2217 mutS; DNA mismatch repair protein MutS
       SP670_0480 MutS2 family protein
       SP670_0252 DNA mismatch repair protein MutL
       SP670_1069 xseA; exodeoxyribonuclease VII, large subunit
       SP670_1070 xseB; exodeoxyribonuclease VII, small subunit
       SP670_1426 DNA polymerase III subunit alpha
       SP670_0346 polC; DNA polymerase III, alpha subunit, Gram-positive type
       SP670_0002 dnaN; DNA polymerase III, beta subunit
       SP670_1561 holA; DNA polymerase III, delta subunit
       SP670_1385 DNA polymerase III subunit delta
       SP670_1327 DNA polymerase III subunit epsilon
       SP670_1459 DNA polymerase III subunit gamma/tau
       SP670_1623 single-stranded DNA-binding protein
       SP670_2172 single-strand binding protein family
       SP670_1988 single-strand binding protein family
       SP670_1925 modification methylase DpnIIA
       SP670_0473 helicase, RecD/TraA family
       SP670_2026 recA; protein RecA
       SP670_0257 ruvA; holliday junction DNA helicase RuvA
       SP670_0332 ruvB; holliday junction DNA helicase RuvB
       SP670_1829 primosomal protein N'
       SP670_0102 radA; DNA repair protein RadA
       SP670_2371 DNA replication and repair protein RecF
       SP670_1788 recG; ATP-dependent DNA helicase RecG
       SP670_0113 recO; DNA repair protein RecO
       SP670_1759 recR; recombination protein RecR
       SP670_1074 recN; DNA repair protein RecN
       SP670_0438 recU; recombination protein U
       SP670_1204 addA; recombination helicase AddA
       SP670_1205 rexB; ATP-dependent nuclease subunit B
       SP670_1060 gyrA; DNA gyrase, A subunit
       SP670_1517 gyrB; DNA gyrase, B subunit
       SP670_1013 topA; DNA topoisomerase I
       SP670_1226 DNA-binding protein HU 1
       SP670_0535 DNA polymerase IV
       SP670_0025 DNA-damage-inducible protein D
       SP670_1979 RecA regulator RecX
       SP670_1521 DnaQ family exonuclease/DinG family helicase, putative
       SP670_1094 ribonucleoside-diphosphate reductase, alpha subunit
       SP670_1093 ribonucleoside-diphosphate reductase, beta subunit
       SP670_0978 DHH subfamily 1 protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K14623 dinD; DNA-damage-inducible protein D
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:snb03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 16, 2024