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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:soi03030]
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03410 Base excision repair [PATH:soi03410]
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I872_06005 endonuclease III
I872_02620 uracil-DNA glycosylase
I872_04715 A/G-specific adenine glycosylase
I872_07045 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
I872_09955 DNA-3-methyladenine glycosylase I
I872_06385 exodeoxyribonuclease
I872_00430 DNA polymerase I
I872_05380 single-stranded-DNA-specific exonuclease RecJ
I872_02030 ligA; NAD-dependent DNA ligase LigA
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:soi03420]
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03430 Mismatch repair [PATH:soi03430]
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03440 Homologous recombination [PATH:soi03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:soi03000]
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03021 Transcription machinery [BR:soi03021]
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03019 Messenger RNA biogenesis [BR:soi03019]
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03041 Spliceosome
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03011 Ribosome [BR:soi03011]
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03009 Ribosome biogenesis [BR:soi03009]
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03016 Transfer RNA biogenesis [BR:soi03016]
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03012 Translation factors [BR:soi03012]
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03110 Chaperones and folding catalysts [BR:soi03110]
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04131 Membrane trafficking [BR:soi04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:soi03032]
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03036 Chromosome and associated proteins [BR:soi03036]
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03400 DNA repair and recombination proteins [BR:soi03400]
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I872_06245 methylated-DNA-[protein]-cysteine S-methyltransferase
I872_02620 uracil-DNA glycosylase
I872_04715 A/G-specific adenine glycosylase
I872_06005 endonuclease III
I872_02625 Mutator mutT protein
I872_09445 NUDIX family hydrolase
I872_09470 7,8-dihydro-8-oxoguanine-triphosphatase
I872_07310 MutT/NUDIX family NTP pyrophosphohydrolase
I872_01330 MutT/NUDIX family protein
I872_01415 MutT/nudix family protein
I872_05970 MutT/nudix family protein
I872_09440 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
I872_09955 DNA-3-methyladenine glycosylase I
I872_07045 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
I872_06385 exodeoxyribonuclease
I872_05380 single-stranded-DNA-specific exonuclease RecJ
I872_02030 ligA; NAD-dependent DNA ligase LigA
I872_00430 DNA polymerase I
I872_09005 uvrA; excinuclease ABC subunit A
I872_02180 excinuclease ABC subunit B
I872_05080 uvrC; excinuclease ABC subunit C
I872_01800 ATP-dependent DNA helicase
I872_00705 rpoB; DNA-directed RNA polymerase subunit beta
I872_00710 DNA-directed RNA polymerase subunit beta'
I872_00615 DNA-directed RNA polymerase subunit alpha
I872_01515 DNA-directed RNA polymerase subunit delta
I872_08075 rpoZ; DNA-directed RNA polymerase subunit omega
I872_00035 transcription-repair coupling factor
I872_09990 DNA mismatch repair protein MutS
I872_01560 DNA mismatch repair protein
I872_09975 mutL; DNA mismatch repair protein
I872_05620 xseA; exodeoxyribonuclease VII large subunit
I872_05615 exodeoxyribonuclease VII small subunit
I872_06900 dnaE; DNA polymerase III DnaE
I872_06165 polC; DNA polymerase III PolC
I872_00010 DNA polymerase III subunit beta
I872_07225 holA; DNA polymerase III subunit delta
I872_06270 DNA polymerase III subunit delta'
I872_03330 DNA polymerase III subunits gamma and tau
I872_09030 single-stranded DNA-binding protein
I872_00815 single-stranded DNA-binding protein
I872_08810 helicase
I872_09930 recA; recombinase A
I872_09960 ruvA; Holliday junction DNA helicase RuvA
I872_00225 ruvB; Holliday junction DNA helicase RuvB
I872_08070 primosome assembly protein PriA
I872_09430 DNA repair protein RadA
I872_10595 recF; recombination protein F
I872_01645 ATP-dependent DNA helicase RecG
I872_00100 recO; DNA repair protein RecO
I872_02210 recR; recombination protein RecR
I872_05595 DNA repair protein RecN
I872_06640 recU; Holliday junction-specific endonuclease
I872_06775 exonuclease RexA
I872_06780 ATP-dependent nuclease subunit B
I872_02525 CRISPR-associated protein cas1
I872_01765 CRISPR-associated protein Cas1
I872_04830 DNA gyrase subunit A
I872_02835 gyrB; DNA gyrase subunit B
I872_04570 DNA topoisomerase I
I872_05575 DNA-binding protein HU
I872_08815 DNA polymerase IV
I872_07615 recX; recombination regulator RecX
I872_02810 ATP-dependent DNA helicase; DNA polymerase III, epsilon subunit
I872_02335 ribonucleotide-diphosphate reductase subunit alpha
I872_02320 nrdF; ribonucleotide-diphosphate reductase subunit beta
I872_01690 hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:soi03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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