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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:spd03030]
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03410 Base excision repair [PATH:spd03410]
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03420 Nucleotide excision repair [PATH:spd03420]
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03430 Mismatch repair [PATH:spd03430]
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03440 Homologous recombination [PATH:spd03440]
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 SPD_0532 recJ; single-stranded-DNA-specific exonuclease RecJ
SPD_1711 single-strand binding protein family protein
SPD_1369 ssb; single-strand binding protein
SPD_2054 recF; recF protein
SPD_0042 recO; DNA repair protein RecO
SPD_1485 recR; recombination protein RecR
SPD_1739 recA; recA protein
SPD_0038 DNA polymerase I
SPD_0170 ruvA; Holliday junction DNA helicase RuvA
SPD_0241 ruvB; Holliday junction DNA helicase RuvB
SPD_1507 recG; ATP-dependent DNA helicase RecG
SPD_0366 helicase, RecD/TraA family protein
SPD_0788 dnaE; DNA polymerase III, alpha subunit
SPD_0254 polC; DNA polymerase III, alpha subunit, Gram-positive type
SPD_0002 dnaN; DNA polymerase III, beta subunit
SPD_0760 dnaX; DNA polymerase III, gamma and tau subunits
SPD_0666 holA; DNA polymerase III, delta subunit
SPD_0826 holB; DNA polymerase III, delta prime subunit
SPD_0879 exonuclease
SPD_1546 priA; primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:spd03000]
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03021 Transcription machinery [BR:spd03021]
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03019 Messenger RNA biogenesis [BR:spd03019]
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03041 Spliceosome
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03011 Ribosome [BR:spd03011]
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03009 Ribosome biogenesis [BR:spd03009]
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03016 Transfer RNA biogenesis [BR:spd03016]
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03012 Translation factors [BR:spd03012]
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03110 Chaperones and folding catalysts [BR:spd03110]
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04131 Membrane trafficking [BR:spd04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:spd03032]
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03036 Chromosome and associated proteins [BR:spd03036]
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03400 DNA repair and recombination proteins [BR:spd03400]
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SPD_1292 ogt; methylated-DNA--protein-cysteine S-methyltransferase
SPD_1032 ung; uracil-DNA glycosylase
SPD_1086 mutY; A/G-specific adenine glycosylase
SPD_1135 nth; endonuclease III
SPD_1031 mutX; Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase)
SPD_0644 MutT/nudix family protein
SPD_1092 MutT/nudix family protein
SPD_0715 MutT/nudix family protein
SPD_1574 MutT/nudix family protein
SPD_0027 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
SPD_0171 tag; DNA-3-methyladenine glycosylase I
SPD_0858 mutM; formamidopyrimidine-DNA glycosylase
SPD_1626 xth; exodeoxyribonuclease III
SPD_0532 recJ; single-stranded-DNA-specific exonuclease RecJ
SPD_1001 ligA; DNA ligase, NAD-dependent
SPD_0038 DNA polymerase I
SPD_0176 uvrA; excinuclease ABC, A subunit
SPD_1096 uvrB; excinuclease ABC, B subunit
SPD_0538 uvrC; excinuclease ABC, C subunit
SPD_0973 pcrA; ATP-dependent DNA helicase PcrA
SPD_1759 rpoB; DNA-directed RNA polymerase, beta subunit
SPD_1758 rpoC; DNA-directed RNA polymerase, beta' subunit
SPD_0218 rpoA; DNA-directed RNA polymerase, alpha subunit
SPD_0441 DNA-directed RNA polymerase, delta subunit, putative
SPD_1547 DNA-directed RNA polymerase omega chain, putative
SPD_0006 mfd; transcription-repair coupling factor
SPD_1903 mutS; DNA mismatch repair protein MutS
SPD_0371 MutS2 family protein
SPD_0165 hexB; DNA mismatch repair protein HexB
SPD_1067 xseA; exodeoxyribonuclease VII, large subunit
SPD_1066 xseB; exodeoxyribonuclease VII, small subunit
SPD_0788 dnaE; DNA polymerase III, alpha subunit
SPD_0254 polC; DNA polymerase III, alpha subunit, Gram-positive type
SPD_0002 dnaN; DNA polymerase III, beta subunit
SPD_0666 holA; DNA polymerase III, delta subunit
SPD_0826 holB; DNA polymerase III, delta prime subunit
SPD_0879 exonuclease
SPD_0760 dnaX; DNA polymerase III, gamma and tau subunits
SPD_1711 single-strand binding protein family protein
SPD_1369 ssb; single-strand binding protein
SPD_0366 helicase, RecD/TraA family protein
SPD_1739 recA; recA protein
SPD_0170 ruvA; Holliday junction DNA helicase RuvA
SPD_0241 ruvB; Holliday junction DNA helicase RuvB
SPD_1546 priA; primosomal protein N'
SPD_0029 radA; DNA repair protein RadA
SPD_2054 recF; recF protein
SPD_1507 recG; ATP-dependent DNA helicase RecG
SPD_0042 recO; DNA repair protein RecO
SPD_1485 recR; recombination protein RecR
SPD_1062 recN; DNA repair protein RecN
SPD_0337 recU; recombination protein U
SPD_1016 rexA; exonuclease RexA
SPD_1015 rexB; ATP-dependent exonuclease RexB
SPD_1077 gyrA; DNA gyrase, A subunit
SPD_0709 gyrB; DNA gyrase, B subunit
SPD_1120 topA; DNA topoisomerase I
SPD_0997 hup; DNA-binding protein HU
SPD_0419 dinP; DNA-damage inducible protein P
SPD_1705 recX; regulatory protein RecX
SPD_0705 DnaQ family exonuclease/DinG family helicase, putative
SPD_1042 nrdE; ribonucleoside-diphosphate reductase, alpha subunit
SPD_1043 nrdF; ribonucleoside-diphosphate reductase, beta subunit
SPD_1153 DHH subfamily 1 protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:spd03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Streptococcus pneumoniae D39 (virulent serotype 2)