KEGG Orthology (KO) - Streptococcus pneumoniae R6 (avirulent serotype 2)

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:spr03030]
     03410 Base excision repair [PATH:spr03410]
     03420 Nucleotide excision repair [PATH:spr03420]
     03430 Mismatch repair [PATH:spr03430]
     03440 Homologous recombination [PATH:spr03440]
       spr0537 recJ; Single-stranded DNA-specific exonuclease, 5'-3'
       spr1395 ssbA; Single stranded binding protein
       spr1724 ssbB; Single-stranded DNA-binding protein
       spr2032 recF; Recombination protein RecF
       spr0036 Conserved hypothetical protein
       spr1516 recR; Recombination protein RecR
       spr1757 recA; DNA recombination/repair
       spr0032 polA; DNA polymerase I
       spr0165 ruvA; Holliday junction DNA helicase
       spr0238 ruvB; Branch migration of Holliday structures
       spr1539 recG; Branch migration of Holliday junctions, junction-specific DNA helicase
       spr0363 recD; Exonuclease V
       spr0795 dnaE; DNA-polymerase III alpha-chain
       spr0251 polC; DNA polymerase III, alpha subunit
       spr0002 dnaN; DNA biosynthesis; sliding clamp subunit, required for high processivity; DNA polymerase III beta-subunit
       spr0769 dnaX; DNA-directed DNA polymerase III chain
       spr0673 holA; DNA polymerase III, delta subunit
       spr0836 holB; DNA polymerase III, delta' subunit
       spr0896 dnaQ; DNA polymerase III, epsilon chain
       spr1581 priA; Primosomal replication factor Y
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:spr03000]
     03021 Transcription machinery [BR:spr03021]
     03019 Messenger RNA biogenesis [BR:spr03019]
     03041 Spliceosome
     03011 Ribosome [BR:spr03011]
     03009 Ribosome biogenesis [BR:spr03009]
     03016 Transfer RNA biogenesis [BR:spr03016]
     03012 Translation factors [BR:spr03012]
     03110 Chaperones and folding catalysts [BR:spr03110]
     04131 Membrane trafficking [BR:spr04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:spr03032]
     03036 Chromosome and associated proteins [BR:spr03036]
     03400 DNA repair and recombination proteins [BR:spr03400]
       spr1317 ogt; O6-methylguanine-DNA methyltransferase
       spr1055 ung; DNA-uracil glycosylase
       spr1108 mutY; Similar to A/G-specific adenine glycosylase
       spr1157 nth; endonuclease III (DNA repair)
       spr1054 mutX; 8-oxodGTP nucleoside triphosphatase
       spr0650 Conserved hypothetical protein
       spr1115 Conserved hypothetical protein
       spr0721 Conserved hypothetical protein
       spr1609 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase
       spr0023 dut; Deoxyuridinetriphosphatase
       spr0166 tag; 3-Methyladenine DNA glycosylase I, constitutive
       spr0872 mutM; Formamidopyrimidine-DNA glycosylase
       spr1660 exoA; Exodeoxyribonuclease
       spr0537 recJ; Single-stranded DNA-specific exonuclease, 5'-3'
       spr1024 ligA; DNA ligase
       spr0032 polA; DNA polymerase I
       spr0171 uvrA; Excinuclease ABC - subunit A
       spr1118 uvrB; Exonuclease ABC - subunit B
       spr0543 uvrC; Exonuclease ABC - subunit C
       spr0995 pcrA; ATP-dependent DNA helicase
       spr1777 rpoB; DNA-dependent RNA polymerase subunit beta
       spr1776 rpoC; DNA-dependent RNA polymerase
       spr0215 rpoA; RNA polymerase alpha subunit
       spr0437 rpoE; RNA polymerase (delta subunit)
       spr1582 Hypothetical protein
       spr0006 mfd; Transcription-repair coupling factor
       spr1888 hexA; DNA mismatch repair protein HexA
       spr0368 mutS2; DNA mismatch repair protein
       spr0160 hexB; DNA mismatch repair protein
       spr1089 xseA; Exodeoxyribonuclease large subunit
       spr1088 xseB; Exodeoxyribonuclease small subunit
       spr0795 dnaE; DNA-polymerase III alpha-chain
       spr0251 polC; DNA polymerase III, alpha subunit
       spr0002 dnaN; DNA biosynthesis; sliding clamp subunit, required for high processivity; DNA polymerase III beta-subunit
       spr0673 holA; DNA polymerase III, delta subunit
       spr0836 holB; DNA polymerase III, delta' subunit
       spr0896 dnaQ; DNA polymerase III, epsilon chain
       spr0769 dnaX; DNA-directed DNA polymerase III chain
       spr1395 ssbA; Single stranded binding protein
       spr1724 ssbB; Single-stranded DNA-binding protein
       spr0363 recD; Exonuclease V
       spr1757 recA; DNA recombination/repair
       spr0165 ruvA; Holliday junction DNA helicase
       spr0238 ruvB; Branch migration of Holliday structures
       spr1581 priA; Primosomal replication factor Y
       spr0025 radA; DNA repair: sensitivity to gamma and UV radiation
       spr2032 recF; Recombination protein RecF
       spr1539 recG; Branch migration of Holliday junctions, junction-specific DNA helicase
       spr0036 Conserved hypothetical protein
       spr1516 recR; Recombination protein RecR
       spr1084 recN; DNA repair and genetic recombination
       spr0330 recU; Recombination protein U
       spr1040 rexA; First subunit of major exonuclease
       spr1039 rexB; Second subunit of major exonuclease
       spr1099 gyrA; DNA gyrase subunit A
       spr0715 gyrB; DNA gyrase
       spr1141 topA; DNA topoisomerase I
       spr1020 hlpA; Histone-like DNA-binding protein
       spr0414 dinP; DNA-damage-inducible protein P
       spr1718 Conserved hypothetical protein
       spr0711 dinG; ATP-dependent DNA helicase
       spr1065 nrdE; Ribonucleoside-diphosphate reductase (major subunit)
       spr1066 nrdF; Nonessential ribonucleoside-diP reductase 2, subunit beta, class I, function unknown
       spr1176 Conserved hypothetical protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:spr03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: March 25, 2024