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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:spr03030]
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03410 Base excision repair [PATH:spr03410]
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03420 Nucleotide excision repair [PATH:spr03420]
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03430 Mismatch repair [PATH:spr03430]
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03440 Homologous recombination [PATH:spr03440]
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spr0537 recJ; Single-stranded DNA-specific exonuclease, 5'-3'
spr1395 ssbA; Single stranded binding protein
spr1724 ssbB; Single-stranded DNA-binding protein
spr2032 recF; Recombination protein RecF
spr0036 Conserved hypothetical protein
spr1516 recR; Recombination protein RecR
spr1757 recA; DNA recombination/repair
spr0032 polA; DNA polymerase I
spr0165 ruvA; Holliday junction DNA helicase
spr0238 ruvB; Branch migration of Holliday structures
spr1539 recG; Branch migration of Holliday junctions, junction-specific DNA helicase
spr0363 recD; Exonuclease V
spr0795 dnaE; DNA-polymerase III alpha-chain
spr0251 polC; DNA polymerase III, alpha subunit
spr0002 dnaN; DNA biosynthesis; sliding clamp subunit, required for high processivity; DNA polymerase III beta-subunit
spr0769 dnaX; DNA-directed DNA polymerase III chain
spr0673 holA; DNA polymerase III, delta subunit
spr0836 holB; DNA polymerase III, delta' subunit
spr0896 dnaQ; DNA polymerase III, epsilon chain
spr1581 priA; Primosomal replication factor Y
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:spr03000]
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03021 Transcription machinery [BR:spr03021]
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03019 Messenger RNA biogenesis [BR:spr03019]
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03041 Spliceosome
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03011 Ribosome [BR:spr03011]
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03009 Ribosome biogenesis [BR:spr03009]
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03016 Transfer RNA biogenesis [BR:spr03016]
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03012 Translation factors [BR:spr03012]
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03110 Chaperones and folding catalysts [BR:spr03110]
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04131 Membrane trafficking [BR:spr04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:spr03032]
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03036 Chromosome and associated proteins [BR:spr03036]
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03400 DNA repair and recombination proteins [BR:spr03400]
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spr1317 ogt; O6-methylguanine-DNA methyltransferase
spr1055 ung; DNA-uracil glycosylase
spr1108 mutY; Similar to A/G-specific adenine glycosylase
spr1157 nth; endonuclease III (DNA repair)
spr1054 mutX; 8-oxodGTP nucleoside triphosphatase
spr0650 Conserved hypothetical protein
spr1115 Conserved hypothetical protein
spr0721 Conserved hypothetical protein
spr1609 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase
spr0023 dut; Deoxyuridinetriphosphatase
spr0166 tag; 3-Methyladenine DNA glycosylase I, constitutive
spr0872 mutM; Formamidopyrimidine-DNA glycosylase
spr1660 exoA; Exodeoxyribonuclease
spr0537 recJ; Single-stranded DNA-specific exonuclease, 5'-3'
spr1024 ligA; DNA ligase
spr0032 polA; DNA polymerase I
spr0171 uvrA; Excinuclease ABC - subunit A
spr1118 uvrB; Exonuclease ABC - subunit B
spr0543 uvrC; Exonuclease ABC - subunit C
spr0995 pcrA; ATP-dependent DNA helicase
spr1777 rpoB; DNA-dependent RNA polymerase subunit beta
spr1776 rpoC; DNA-dependent RNA polymerase
spr0215 rpoA; RNA polymerase alpha subunit
spr0437 rpoE; RNA polymerase (delta subunit)
spr1582 Hypothetical protein
spr0006 mfd; Transcription-repair coupling factor
spr1888 hexA; DNA mismatch repair protein HexA
spr0368 mutS2; DNA mismatch repair protein
spr0160 hexB; DNA mismatch repair protein
spr1089 xseA; Exodeoxyribonuclease large subunit
spr1088 xseB; Exodeoxyribonuclease small subunit
spr0795 dnaE; DNA-polymerase III alpha-chain
spr0251 polC; DNA polymerase III, alpha subunit
spr0002 dnaN; DNA biosynthesis; sliding clamp subunit, required for high processivity; DNA polymerase III beta-subunit
spr0673 holA; DNA polymerase III, delta subunit
spr0836 holB; DNA polymerase III, delta' subunit
spr0896 dnaQ; DNA polymerase III, epsilon chain
spr0769 dnaX; DNA-directed DNA polymerase III chain
spr1395 ssbA; Single stranded binding protein
spr1724 ssbB; Single-stranded DNA-binding protein
spr0363 recD; Exonuclease V
spr1757 recA; DNA recombination/repair
spr0165 ruvA; Holliday junction DNA helicase
spr0238 ruvB; Branch migration of Holliday structures
spr1581 priA; Primosomal replication factor Y
spr0025 radA; DNA repair: sensitivity to gamma and UV radiation
spr2032 recF; Recombination protein RecF
spr1539 recG; Branch migration of Holliday junctions, junction-specific DNA helicase
spr0036 Conserved hypothetical protein
spr1516 recR; Recombination protein RecR
spr1084 recN; DNA repair and genetic recombination
spr0330 recU; Recombination protein U
spr1040 rexA; First subunit of major exonuclease
spr1039 rexB; Second subunit of major exonuclease
spr1099 gyrA; DNA gyrase subunit A
spr0715 gyrB; DNA gyrase
spr1141 topA; DNA topoisomerase I
spr1020 hlpA; Histone-like DNA-binding protein
spr0414 dinP; DNA-damage-inducible protein P
spr1718 Conserved hypothetical protein
spr0711 dinG; ATP-dependent DNA helicase
spr1065 nrdE; Ribonucleoside-diphosphate reductase (major subunit)
spr1066 nrdF; Nonessential ribonucleoside-diP reductase 2, subunit beta, class I, function unknown
spr1176 Conserved hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:spr03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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